Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_27657_v3 Cicer arietinum L. HOM05D006264 ORTHO05D007739 7.0e-195 683.7 331 100.0
Medtr3g088580 Medicago truncatula HOM05D006264 ORTHO05D007739 5.7e-181 637.5 331 92.1
Glyma.06G115200 Glycine max HOM05D006264 ORTHO05D007739 2.0e-178 629.0 331 91.5
Phvul.009G127300 Phaseolus vulgaris HOM05D006264 ORTHO05D007739 2.7e-178 628.6 331 91.2
Glyma.04G247500 Glycine max HOM05D006264 ORTHO05D007739 1.1e-176 623.2 332 90.1
VMungo1309G2910 Vigna mungo HOM05D006264 ORTHO05D007739 2.5e-176 622.1 331 89.7
Lj1g0001411 Lotus japonicus HOM05D006264 ORTHO05D007739 3.6e-175 618.2 331 88.8
Lalb_Chr11g0066051 Lupinus albus HOM05D006264 ORTHO05D007739 4.0e-174 614.8 331 88.2
arahy.Tifrunner.gnm1.ann1.YYE7NP Arachis hypogaea HOM05D006264 ORTHO05D007739 1.2e-173 613.2 331 88.5
arahy.Tifrunner.gnm1.ann1.W8H4W4 Arachis hypogaea HOM05D006264 ORTHO05D007739 5.7e-173 610.9 331 88.2
TPR.G13464 Trifolium pratense HOM05D006264 ORTHO05D007739 4.1e-171 604.7 331 88.8
Lalb_Chr08g0241301 Lupinus albus HOM05D006264 ORTHO05D007739 5.9e-170 600.9 327 86.9
Thecc.08G126800 Theobroma cacao HOM05D006264 ORTHO05D007739 2.3e-169 599.0 327 85.9
MELO3C010482.2 Cucumis melo HOM05D006264 ORTHO05D007739 6.1e-167 590.9 327 83.8
Ciclev10001823m.g Citrus clementina HOM05D006264 ORTHO05D007739 2.3e-166 589.0 327 83.5
Sed0004807 Sechium edule HOM05D006264 ORTHO05D007739 5.2e-166 587.8 327 83.8
COL.COLO4_04990 Corchorus olitorius HOM05D006264 ORTHO05D007739 2.6e-165 585.5 327 83.8
CsaV3_4G028200 Cucumis sativus L. HOM05D006264 ORTHO05D007739 4.4e-165 584.7 327 82.6
Prupe.1G494700 Prunus persica HOM05D006264 ORTHO05D007739 6.4e-164 580.9 327 82.9
Gohir.D06G045800 Gossypium hirsutum HOM05D006264 ORTHO05D007739 8.3e-164 580.5 323 86.1
Gorai.010G051000 Gossypium raimondii HOM05D006264 ORTHO05D007739 8.3e-164 580.5 323 86.1
QL09p034323 Quercus lobata HOM05D006264 ORTHO05D007739 1.4e-163 579.7 326 81.9
arahy.Tifrunner.gnm1.ann1.9W7Z3M Arachis hypogaea HOM05D006264 ORTHO05D007739 1.8e-163 579.3 339 83.5
PGR044G1646 Punica granatum HOM05D006264 ORTHO05D007739 1.3e-161 573.2 327 82.6
TAR381G1225 Trochodendron aralioides HOM05D006264 ORTHO05D007739 5.0e-161 571.2 327 81.0
THA.LOC104810199 Tarenaya hassleriana HOM05D006264 ORTHO05D007739 8.6e-161 570.5 323 81.1
Actinidia29470 Actinidia chinensis HOM05D006264 ORTHO05D007739 5.6e-160 567.8 327 79.8
Eucgr.F04347 Eucalyptus grandis HOM05D006264 ORTHO05D007739 7.3e-160 567.4 327 81.0
MD15G1347000 Malus domestica HOM05D006264 ORTHO05D007739 1.2e-159 566.6 327 80.7
Nn1g08814 Nelumbo nucifera HOM05D006264 ORTHO05D007739 1.6e-159 566.2 327 79.5
CSS0035031 Camellia sinensis var. sinensis HOM05D006264 ORTHO05D007739 4.7e-159 564.7 327 79.8
AT1G21760 Arabidopsis thaliana HOM05D006264 ORTHO05D007739 1.0e-158 563.5 326 80.4
Dinv27304 Davidia involucrata HOM05D006264 ORTHO05D007739 3.1e-158 562.0 327 80.1
CANSAT11G2315 Cannabis sativa HOM05D006264 ORTHO05D007739 4.0e-158 561.6 327 80.1
FAN15G0088 Fragaria x ananassa HOM05D006264 ORTHO05D007739 8.9e-158 560.5 328 79.0
FAN24G2929 Fragaria x ananassa HOM05D006264 ORTHO05D007739 3.4e-157 558.5 328 78.4
TWI60G1034 Tripterygium wilfordii HOM05D006264 ORTHO05D007739 4.4e-157 558.1 329 79.3
Aa31LG7G5740 Aethionema arabicum HOM05D006264 ORTHO05D007739 5.8e-157 557.8 326 80.4
Lj4C628G13 Lonicera japonica HOM05D006264 ORTHO05D007739 5.8e-157 557.8 328 79.3
FAN20G0424 Fragaria x ananassa HOM05D006264 ORTHO05D007739 7.5e-157 557.4 328 78.7
RcHm_v2.0_Chr6g0295971 Rosa chinensis HOM05D006264 ORTHO05D007739 2.9e-156 555.4 327 78.3
CARHR022150 Cardamine hirsuta HOM05D006264 ORTHO05D007739 6.4e-156 554.3 326 78.5
BcaB07g32175 Brassica carinata HOM05D006264 ORTHO05D007739 1.1e-155 553.5 326 79.4
ClCG11G015780 Citrullus lanatus HOM05D006264 ORTHO05D007739 1.4e-155 553.1 311 82.0
Sp1g19320 Schrenkiella parvula HOM05D006264 ORTHO05D007739 2.4e-155 552.4 326 78.8
Oeu040415.1 Olea europaea HOM05D006264 ORTHO05D007739 3.2e-155 552.0 327 77.7
TAR625G1219 Trochodendron aralioides HOM05D006264 ORTHO05D007739 7.0e-155 550.8 327 76.5
BcaC05g26098 Brassica carinata HOM05D006264 ORTHO05D007739 2.0e-154 549.3 326 79.1
MSTRG.1441 Avicennia marina HOM05D006264 ORTHO05D007739 3.5e-154 548.5 327 76.8
A06p17870 Brassica napus HOM05D006264 ORTHO05D007739 7.8e-154 547.4 342 76.3
BraA06t24877Z Brassica rapa HOM05D006264 ORTHO05D007739 7.8e-154 547.4 342 76.3
CiPaw.05G220800 Carya illinoinensis HOM05D006264 ORTHO05D007739 2.3e-153 545.8 327 78.0
Sc02g0005000 Simmondsia chinensis HOM05D006264 ORTHO05D007739 2.3e-153 545.8 327 75.8
BolC5t30776H Brassica oleracea HOM05D006264 ORTHO05D007739 5.0e-153 544.7 339 76.7
Carub.0001s2122 Capsella rubella HOM05D006264 ORTHO05D007739 5.0e-153 544.7 326 77.9
Cc10_g12020 Coffea canephora HOM05D006264 ORTHO05D007739 5.0e-153 544.7 327 75.8
Haze_00430 Corylus avellana HOM05D006264 ORTHO05D007739 8.6e-153 543.9 340 77.4
Hund17298 Selenicereus undatus HOM05D006264 ORTHO05D007739 2.5e-152 542.3 325 77.8
PGSC0003DMG400000884 Solanum tuberosum HOM05D006264 ORTHO05D007739 4.3e-152 541.6 327 75.8
Solyc11g012830.3 Solanum lycopersicum HOM05D006264 ORTHO05D007739 9.5e-152 540.4 327 75.5
Nitab4.5_0001996g0020 Nicotiana tabacum HOM05D006264 ORTHO05D007739 1.2e-151 540.0 330 74.2
Duzib093G0816 Durio zibethinus HOM05D006264 ORTHO05D007739 1.1e-150 537.0 327 79.8
CAN.G2.26 Capsicum annuum HOM05D006264 ORTHO05D007739 5.2e-150 534.6 331 73.1
FvH4_2g27090 Fragaria vesca HOM05D006264 ORTHO05D007739 1.2e-149 533.5 324 75.0
vmacro00839 Vaccinium macrocarpon HOM05D006264 ORTHO05D007739 1.5e-149 533.1 327 75.5
HanXRQChr05g0151071 Helianthus annuus HOM05D006264 ORTHO05D007739 4.4e-149 531.6 327 74.6
Aqoxy6G00234 Aquilegia oxysepala HOM05D006264 ORTHO05D007739 6.4e-148 527.7 319 76.2
C05p20770 Brassica napus HOM05D006264 ORTHO05D007739 1.9e-147 526.2 324 76.5
EL10Ac1g01023 Beta vulgaris HOM05D006264 ORTHO05D007739 1.6e-146 523.1 327 74.0
Rhsim11G0069200 Rhododendron simsii HOM05D006264 ORTHO05D007739 1.6e-146 523.1 324 74.4
MBI16_g07653_MAGBIO Magnolia biondii HOM05D006264 ORTHO05D007739 2.7e-146 522.3 326 74.5
Manes.02G164400 Manihot esculenta HOM05D006264 ORTHO05D007739 2.5e-144 515.8 327 73.1
SGA_v2.0_scaffold24G10459 Striga asiatica HOM05D006264 ORTHO05D007739 2.1e-143 512.7 319 74.6
AUR62019071 Chenopodium quinoa HOM05D006264 ORTHO05D007739 2.3e-142 509.2 328 72.3
AUR62014328 Chenopodium quinoa HOM05D006264 ORTHO05D007739 3.1e-142 508.8 328 72.3
PSO170G1538 Papaver somniferum HOM05D006264 ORTHO05D007739 3.1e-142 508.8 327 72.5
PSO528G0109 Papaver somniferum HOM05D006264 ORTHO05D007739 5.2e-142 508.1 327 72.2
Migut.C01127 Erythranthe guttata HOM05D006264 ORTHO05D007739 1.2e-141 506.9 327 70.9
Potri.005G178600 Populus trichocarpa HOM05D006264 ORTHO05D007739 5.8e-141 504.6 327 73.4
CDE02G1850 Ceratophyllum demersum HOM05D006264 ORTHO05D007739 1.3e-140 503.4 326 70.2
PSO063G0125 Papaver somniferum HOM05D006264 ORTHO05D007739 3.7e-140 501.9 327 71.3
Peaxi162Scf00914g00315 Petunia axillaris HOM05D006264 ORTHO05D007739 3.2e-139 498.8 298 75.5
Potri.002G082500 Populus trichocarpa HOM05D006264 ORTHO05D007739 1.0e-137 493.8 327 71.3
Lsat_1_v5_gn_6_112861 Lactuca sativa HOM05D006264 ORTHO05D007739 4.3e-136 488.4 325 70.8
ATR0584G291 Amborella trichopoda HOM05D006264 ORTHO05D007739 2.8e-135 485.7 316 70.6
GSVIVG01008855001 Vitis vinifera HOM05D006264 ORTHO05D007739 4.0e-134 481.9 327 71.6
Nitab4.5_0001803g0010 Nicotiana tabacum HOM05D006264 ORTHO05D007739 9.9e-133 477.2 311 71.4
QL09p034368 Quercus lobata HOM05D006264 ORTHO05D007739 4.8e-127 458.4 253 83.0
THA.LOC104801868 Tarenaya hassleriana HOM05D006264 ORTHO05D007739 3.4e-125 452.2 254 80.3
HPP92_004401 Vanilla planifolia HOM05D006264 ORTHO05D007739 7.6e-125 451.1 326 63.2
HPP92_027807 Vanilla planifolia HOM05D006264 ORTHO05D007739 2.2e-124 449.5 326 62.9
AL1G34960 Arabidopsis lyrata HOM05D006264 ORTHO05D007739 4.2e-123 445.3 255 81.2
unitig_748.g7689 Utricularia gibba HOM05D006264 ORTHO05D007739 3.0e-121 439.1 319 66.5
Thhalv10008543m.g Eutrema salsugineum HOM05D006264 ORTHO05D007739 8.7e-121 437.6 255 78.8
SMO347G0097 Selaginella moellendorffii HOM05D006264 ORTHO05D007739 4.3e-120 435.3 310 64.2
Zm00001eb422580 Zea mays HOM05D006264 ORTHO05D007739 4.8e-119 431.8 330 60.3
Sabra02G0064700 Salix brachista HOM05D006264 ORTHO05D007739 4.0e-118 428.7 327 64.2
Gohir.A06G045300 Gossypium hirsutum HOM05D006264 ORTHO05D007739 6.9e-118 427.9 239 83.7
Pp3c3_38060 Physcomitrium patens HOM05D006264 ORTHO05D007739 2.0e-117 426.4 303 64.7
ECA246G2185 Erigeron canadensis HOM05D006264 ORTHO05D007739 2.4e-115 419.5 276 70.7
Mapoly0151s0012 Marchantia polymorpha HOM05D006264 ORTHO05D007739 4.8e-111 405.2 318 57.9
AagrBONN_evm.TU.Sc2ySwM_117.473 Anthoceros agrestis HOM05D006264 ORTHO05D007739 7.1e-107 391.3 310 57.4
DCAR_028205 Daucus carota HOM05D006264 ORTHO05D007739 9.3e-107 391.0 254 71.7
Atru.chr13.1491 Acer truncatum HOM05D006264 ORTHO05D007739 1.9e-99 366.7 221 80.5
Psat5g086280 Pisum sativum HOM05D006264 ORTHO05D007739 5.9e-93 345.1 170 92.4
Sopen11g007570 Solanum pennellii HOM05D006264 ORTHO05D007739 7.9e-90 334.7 199 78.4
CBR_g39544 Chara braunii HOM05D006264 ORTHO05D007739 1.0e-89 334.3 313 51.8
Cpa.g.c35582 Carica papaya HOM05D006264 ORTHO05D007739 4.1e-62 242.7 144 82.6
Psat5g086240 Pisum sativum HOM05D006264 ORTHO05D007739 1.7e-60 237.3 133 88.7
Cpa.g.sc418.8 Carica papaya HOM05D006264 ORTHO05D007739 2.3e-49 200.3 114 79.8
Os04g0431200 Oryza sativa ssp. japonica HOM05D006264 ORTHO05D007739 1.3e-47 194.5 147 57.1
MCO07G330 Micromonas commoda HOM05D006264 ORTHO05D007739 4.9e-47 192.6 315 36.5
PRCOL_00004228 Prasinoderma coloniale HOM05D006264 ORTHO05D007739 1.1e-46 191.4 282 37.9
Cre06.g254450 Chlamydomonas reinhardtii HOM05D006264 ORTHO05D007739 7.0e-38 162.2 306 32.0
Medtr4g068980 Medicago truncatula HOM05D006264 ORTHO05D007739 4.6e-37 159.5 82 87.8
arahy.Tifrunner.gnm1.ann1.XAL0CN Arachis hypogaea HOM05D003584 ORTHO05D004148 1.7e-31 141.0 109 59.6
SEGI_39749 Sequoiadendron giganteum HOM05D006264 ORTHO05D007739 2.2e-31 140.6 111 65.8
Cpa.g.c45459 Carica papaya HOM05D006264 ORTHO05D007739 1.0e-28 131.7 78 82.1
Zm00001eb082740 Zea mays HOM05D006264 ORTHO05D007739 9.5e-27 125.2 134 50.7
Atru.chr13.1492 Acer truncatum HOM05D006264 ORTHO05D007739 3.6e-26 123.2 72 77.8
SEGI_38549 Sequoiadendron giganteum HOM05D006264 ORTHO05D007739 1.4e-25 121.3 67 71.6
Migut.B01582 Erythranthe guttata HOM05D006264 ORTHO05D007739 2.1e-18 97.4 58 74.1
PGSC0003DMG400006698 Solanum tuberosum HOM05D006264 ORTHO05D007739 1.9e-14 84.3 69 56.5
Rhsim11G0069000 Rhododendron simsii HOM05D006264 ORTHO05D007739 2.1e-10 70.9 61 59.0
Actinidia03465 Actinidia chinensis HOM05D006264 ORTHO05D007739 2.6e-08 63.9 36 77.8
SEGI_08627 Sequoiadendron giganteum HOM05D006264 ORTHO05D007739 2.6e-08 63.9 42 64.3


User provided reference genes

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