Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_27292_v3 Cicer arietinum L. HOM05D006114 ORTHO05D007609 1.1e-228 796.2 386 100.0
Medtr6g034935 Medicago truncatula HOM05D006114 ORTHO05D007609 3.3e-188 661.8 388 82.0
Lj2g0010896 Lotus japonicus HOM05D006114 ORTHO05D007609 1.5e-169 599.7 389 76.3
Lalb_Chr19g0130321 Lupinus albus HOM05D006114 ORTHO05D007609 7.2e-159 564.3 389 73.3
VMungo0464G2055 Vigna mungo HOM05D006114 ORTHO05D007609 2.3e-157 559.3 390 72.3
Phvul.004G097500 Phaseolus vulgaris HOM05D006114 ORTHO05D007609 9.7e-156 553.9 388 70.4
MD05G1021300 Malus domestica HOM05D006114 ORTHO05D007609 4.2e-151 538.5 375 70.9
Prupe.8G025000 Prunus persica HOM05D006114 ORTHO05D007609 1.1e-148 530.4 376 71.8
MD10G1022100 Malus domestica HOM05D006114 ORTHO05D007609 1.7e-147 526.6 378 70.6
CANSAT25G1256 Cannabis sativa HOM05D006114 ORTHO05D007609 8.5e-144 514.2 392 68.6
Dinv41097 Davidia involucrata HOM05D006114 ORTHO05D007609 1.6e-142 510.0 372 68.3
RcHm_v2.0_Chr6g0276341 Rosa chinensis HOM05D006114 ORTHO05D007609 2.7e-142 509.2 377 69.0
CSS0028797 Camellia sinensis var. sinensis HOM05D006114 ORTHO05D007609 1.8e-141 506.5 384 66.1
Medtr6g049050 Medicago truncatula HOM05D006114 ORTHO05D007609 3.0e-141 505.8 379 68.1
TAR381G1603 Trochodendron aralioides HOM05D006114 ORTHO05D007609 5.7e-140 501.5 382 66.2
Hma1.2p1_0616F.1_g190010 Hydrangea macrophylla HOM05D006114 ORTHO05D007609 7.5e-140 501.1 385 67.8
QL02p024207 Quercus lobata HOM05D006114 ORTHO05D007609 1.7e-139 500.0 395 65.6
Haze_17740 Corylus avellana HOM05D006114 ORTHO05D007609 2.8e-139 499.2 387 67.2
CiPaw.16G014300 Carya illinoinensis HOM05D006114 ORTHO05D007609 1.4e-138 496.9 394 66.5
Cfa018335 Carpinus fangiana HOM05D006114 ORTHO05D007609 2.4e-138 496.1 384 67.4
Glyma.02G083400 Glycine max HOM05D006114 ORTHO05D007609 3.1e-138 495.7 382 65.7
Ciclev10001576m.g Citrus clementina HOM05D006114 ORTHO05D007609 5.3e-138 495.0 383 64.8
Sed0024386 Sechium edule HOM05D006114 ORTHO05D007609 5.3e-138 495.0 377 65.5
FAN15G0766 Fragaria x ananassa HOM05D006114 ORTHO05D007609 2.0e-137 493.0 377 68.4
Actinidia15143 Actinidia chinensis HOM05D006114 ORTHO05D007609 9.4e-135 484.2 385 62.3
TAR625G1556 Trochodendron aralioides HOM05D006114 ORTHO05D007609 1.2e-134 483.8 382 64.9
Solyc04g071130.1 Solanum lycopersicum HOM05D006114 ORTHO05D007609 2.7e-134 482.6 381 61.7
Sopen04g027070 Solanum pennellii HOM05D006114 ORTHO05D007609 2.7e-134 482.6 381 61.7
PGSC0003DMG400000797 Solanum tuberosum HOM05D006114 ORTHO05D007609 3.6e-134 482.3 381 61.4
Nn1g06119 Nelumbo nucifera HOM05D006114 ORTHO05D007609 8.0e-134 481.1 382 63.9
PSO541G3056 Papaver somniferum HOM05D006114 ORTHO05D007609 1.8e-133 479.9 391 61.9
PSO675G2834 Papaver somniferum HOM05D006114 ORTHO05D007609 1.8e-133 479.9 388 60.8
Nitab4.5_0006608g0010 Nicotiana tabacum HOM05D006114 ORTHO05D007609 3.0e-133 479.2 383 61.1
Lj7A371T45 Lonicera japonica HOM05D006114 ORTHO05D007609 6.8e-133 478.0 381 64.0
Atru.chr13.2189 Acer truncatum HOM05D006114 ORTHO05D007609 2.6e-132 476.1 385 63.1
Cpa.g.sc21.182 Carica papaya HOM05D006114 ORTHO05D007609 2.8e-131 472.6 383 66.1
Hund26709 Selenicereus undatus HOM05D006114 ORTHO05D000105 2.8e-131 472.6 410 61.7
CAN.G175.3 Capsicum annuum HOM05D006114 ORTHO05D007609 3.7e-131 472.2 386 60.9
Potri.002G069900 Populus trichocarpa HOM05D006114 ORTHO05D007609 3.7e-131 472.2 390 65.1
Aqoxy5G02132 Aquilegia oxysepala HOM05D006114 ORTHO05D007609 1.4e-130 470.3 387 63.6
COL.COLO4_24672 Corchorus olitorius HOM05D006114 ORTHO05D007609 1.4e-130 470.3 399 62.9
PGR042G1057 Punica granatum HOM05D006114 ORTHO05D007609 1.8e-130 469.9 396 62.6
PGR122G0006 Punica granatum HOM05D006114 ORTHO05D007609 1.8e-130 469.9 396 62.6
BcaB02g07084 Brassica carinata HOM05D006114 ORTHO05D007609 7.0e-130 468.0 390 63.8
THA.LOC104812044 Tarenaya hassleriana HOM05D006114 ORTHO05D007609 7.0e-130 468.0 402 61.7
AL2G37050 Arabidopsis lyrata HOM05D006114 ORTHO05D007609 1.2e-129 467.2 399 61.7
Nitab4.5_0000032g0440 Nicotiana tabacum HOM05D006114 ORTHO05D007609 1.2e-129 467.2 377 60.5
Potri.005G190400 Populus trichocarpa HOM05D006114 ORTHO05D007609 1.2e-129 467.2 386 64.2
BraA07t30466Z Brassica rapa HOM05D006114 ORTHO05D007609 2.0e-129 466.5 388 63.4
AUR62039242 Chenopodium quinoa HOM05D006114 ORTHO05D007609 2.7e-129 466.1 395 60.8
Manes.02G177800 Manihot esculenta HOM05D006114 ORTHO05D007609 3.5e-129 465.7 412 59.7
TWI32G1226 Tripterygium wilfordii HOM05D006114 ORTHO05D007609 3.5e-129 465.7 382 63.4
TWI34G0188 Tripterygium wilfordii HOM05D006114 ORTHO05D007609 3.5e-129 465.7 384 61.2
A07p28250 Brassica napus HOM05D006114 ORTHO05D007609 4.5e-129 465.3 388 63.1
AT1G76920 Arabidopsis thaliana HOM05D006114 ORTHO05D007609 5.9e-129 464.9 387 62.5
C06p31720 Brassica napus HOM05D006114 ORTHO05D007609 7.7e-129 464.5 388 63.1
BolC6t38302H Brassica oleracea HOM05D006114 ORTHO05D007609 7.7e-129 464.5 388 63.1
Eucgr.F02716 Eucalyptus grandis HOM05D006114 ORTHO05D007609 1.0e-128 464.2 408 60.8
EL10Ac7g15790 Beta vulgaris HOM05D006114 ORTHO05D007609 2.3e-128 463.0 393 61.1
THA.LOC104813707 Tarenaya hassleriana HOM05D006114 ORTHO05D007609 2.9e-128 462.6 397 59.9
Duzib041G0274 Durio zibethinus HOM05D006114 ORTHO05D007609 6.5e-128 461.5 399 62.2
Lsat_1_v5_gn_1_8460 Lactuca sativa HOM05D006114 ORTHO05D007609 6.5e-128 461.5 379 61.5
Aa31LG4G6950 Aethionema arabicum HOM05D006114 ORTHO05D007609 8.6e-128 461.1 396 61.4
Carub.0002s2378 Capsella rubella HOM05D006114 ORTHO05D007609 8.6e-128 461.1 401 62.6
SpUn0346_0010 Schrenkiella parvula HOM05D006114 ORTHO05D007609 8.6e-128 461.1 397 61.2
DCAR_010096 Daucus carota HOM05D006114 ORTHO05D007609 1.1e-127 460.7 386 61.7
Gohir.D05G271900 Gossypium hirsutum HOM05D006114 ORTHO05D007609 1.5e-127 460.3 399 60.2
Gorai.009G284900 Gossypium raimondii HOM05D006114 ORTHO05D007609 1.5e-127 460.3 399 60.2
Rhsim05G0182400 Rhododendron simsii HOM05D006114 ORTHO05D007609 1.9e-127 459.9 385 62.6
BcaC08g45501 Brassica carinata HOM05D006114 ORTHO05D007609 2.5e-127 459.5 388 62.6
Gohir.A05G269900 Gossypium hirsutum HOM05D006114 ORTHO05D007609 2.5e-127 459.5 399 59.9
BcaB05g25019 Brassica carinata HOM05D006114 ORTHO05D007609 9.5e-127 457.6 386 62.2
Thecc.08G149100 Theobroma cacao HOM05D006114 ORTHO05D007609 9.5e-127 457.6 398 61.1
Thhalv10019824m.g Eutrema salsugineum HOM05D006114 ORTHO05D007609 4.7e-126 455.3 392 61.5
Duzib116G0820 Durio zibethinus HOM05D006114 ORTHO05D007609 1.0e-125 454.1 403 61.5
Sabra02G0054600 Salix brachista HOM05D006114 ORTHO05D007609 3.4e-124 449.1 368 64.9
Sed0010814 Sechium edule HOM05D006114 ORTHO05D007609 7.5e-124 448.0 387 59.4
Ah.08g215970 Amaranthus hybridus HOM05D006114 ORTHO05D007609 1.7e-123 446.8 390 58.7
FvH4_2g14200 Fragaria vesca HOM05D006114 ORTHO05D007609 2.8e-123 446.0 311 70.4
Cc10_g14550 Coffea canephora HOM05D006114 ORTHO05D007609 3.1e-122 442.6 398 57.5
FAN24G0263 Fragaria x ananassa HOM05D006114 ORTHO05D007609 8.0e-118 427.9 299 69.9
Migut.C01010 Erythranthe guttata HOM05D006114 ORTHO05D007609 2.9e-115 419.5 390 54.6
SalBow7G1400 Salvia bowleyana HOM05D006114 ORTHO05D007609 8.3e-115 417.9 376 55.9
Oeu032982.1 Olea europaea HOM05D006114 ORTHO05D007609 1.8e-114 416.8 384 53.4
MSTRG.1356 Avicennia marina HOM05D006114 ORTHO05D007609 3.9e-112 409.1 383 53.5
Lj7A371T46 Lonicera japonica HOM05D006114 ORTHO05D007609 4.0e-109 399.1 379 54.4
HanXRQChr02g0039921 Helianthus annuus HOM05D006114 ORTHO05D007609 5.2e-109 398.7 310 62.3
Peaxi162Scf00263g01414 Petunia axillaris HOM05D006114 ORTHO05D007609 2.0e-108 396.7 291 64.3
unitig_749.g13920 Utricularia gibba HOM05D006114 ORTHO05D007609 1.3e-107 394.0 384 51.8
MSTRG.22368 Avicennia marina HOM05D006114 ORTHO05D007609 6.4e-107 391.7 381 53.3
Psat0s3019g0080 Pisum sativum HOM05D006114 ORTHO05D007609 1.7e-104 383.6 215 86.0
CARHR070420 Cardamine hirsuta HOM05D006114 ORTHO05D007609 2.2e-99 366.7 319 61.4
HPP92_009302 Vanilla planifolia HOM05D006114 ORTHO05D007609 6.4e-99 365.2 409 52.8
ECA247G0840 Erigeron canadensis HOM05D006114 ORTHO05D007609 2.3e-96 356.7 254 67.3
MBI17_g34067_MAGBIO Magnolia biondii HOM05D006114 ORTHO05D007609 1.5e-95 354.0 292 62.0
Zm00001eb434300 Zea mays HOM05D006114 ORTHO05D007609 2.0e-92 343.6 400 46.2
Zm00001eb076050 Zea mays HOM05D006114 ORTHO05D007609 2.3e-88 330.1 398 45.7
TPR.G36696 Trifolium pratense HOM05D006114 ORTHO05D007609 1.8e-85 320.5 162 92.0
FAN27G1342 Fragaria x ananassa HOM05D006114 ORTHO05D007609 8.4e-83 311.6 202 74.8
GSVIVG01034899001 Vitis vinifera HOM05D006114 ORTHO05D007609 1.9e-82 310.5 378 47.6
Os04g0686700 Oryza sativa ssp. japonica HOM05D006114 ORTHO05D007609 5.6e-79 298.9 320 50.0
AUR62009796 Chenopodium quinoa HOM05D006114 ORTHO05D007609 1.3e-78 297.7 205 68.3
Migut.N03218 Erythranthe guttata HOM05D006114 ORTHO05D007609 2.0e-76 290.4 387 42.1
Oeu046020.2 Olea europaea HOM05D006114 ORTHO05D007609 8.4e-59 231.9 384 38.0
SEGI_30218 Sequoiadendron giganteum HOM05D006114 ORTHO05D007609 2.2e-54 217.2 384 34.1
unitig_26.g9904 Utricularia gibba HOM05D006114 ORTHO05D007609 1.8e-53 214.2 253 45.8
SGA_v2.0_scaffold48G17978 Striga asiatica HOM05D006114 ORTHO05D007609 1.3e-51 208.0 149 61.7
Zm00001eb268540 Zea mays HOM05D006114 ORTHO05D007609 1.1e-45 188.3 184 52.2
unitig_26.g9903 Utricularia gibba HOM05D006114 ORTHO05D007609 3.7e-38 163.3 110 63.6
AUR62009795 Chenopodium quinoa HOM05D006114 ORTHO05D007609 1.1e-37 161.8 215 41.9
FAN14G0378 Fragaria x ananassa HOM05D006114 ORTHO05D007609 5.3e-37 159.5 141 60.3
AUR62039241 Chenopodium quinoa HOM05D006114 ORTHO05D007609 2.6e-36 157.1 211 42.2
ATR0772G199 Amborella trichopoda HOM05D006114 ORTHO05D007609 6.5e-35 152.5 212 42.5
Zm00001eb182860 Zea mays HOM05D006114 ORTHO05D007609 8.5e-27 125.6 145 44.1
FvH4_3g14282 Fragaria vesca HOM05D006114 ORTHO05D007609 4.2e-26 123.2 112 58.9
CDE08G0205 Ceratophyllum demersum HOM05D006114 ORTHO05D007609 5.5e-26 122.9 90 65.6
Zm00001eb346130 Zea mays HOM05D003599 ORTHO05D004221 2.6e-23 114.0 90 61.1
Zm00001eb243390 Zea mays HOM05D006114 ORTHO05D007609 1.4e-21 108.2 93 57.0
VMungo1383G2819 Vigna mungo HOM05D006114 ORTHO05D007609 4.5e-20 103.2 80 62.5
Zm00001eb268570 Zea mays HOM05D006114 ORTHO05D007609 7.2e-18 95.9 83 54.2
Zm00001eb080990 Zea mays HOM05D006114 ORTHO05D007609 9.4e-18 95.5 68 61.8
Zm00001eb268560 Zea mays HOM05D006114 ORTHO05D007609 1.4e-16 91.7 104 44.2
Zm00001eb080980 Zea mays HOM05D006114 ORTHO05D007609 3.7e-14 83.6 104 41.3
arahy.Tifrunner.gnm1.ann1.0BPN3L Arachis hypogaea HOM05D000034 ORTHO05D000037 4.8e-14 83.2 58 62.1
Mapoly0125s0029 Marchantia polymorpha HOM05D002809 ORTHO05D009091 1.1e-13 82.0 387 25.3
SGA_v2.0_scaffold52G19058 Striga asiatica HOM05D004302 ORTHO05D004939 2.0e-12 77.8 357 25.8
Cc07_g04590 Coffea canephora HOM05D004302 ORTHO05D004939 2.7e-12 77.4 359 25.6
DCAR_025461 Daucus carota HOM05D004302 ORTHO05D004939 4.5e-12 76.6 361 25.5
SEGI_36099 Sequoiadendron giganteum HOM05D003005 ORTHO05D030467 2.9e-11 73.9 400 23.8
FvH4_6g34681 Fragaria vesca HOM05D006114 ORTHO05D007609 1.1e-10 72.0 74 52.7
Pp3c24_8170 Physcomitrium patens HOM05D002809 ORTHO05D004939 2.5e-10 70.9 388 24.0
FvH4_6g34680 Fragaria vesca HOM05D006114 ORTHO05D007609 3.3e-10 70.5 53 69.8
SMO276G0031 Selaginella moellendorffii HOM05D007753 ORTHO05D009385 7.2e-10 69.3 398 21.6
Sabra02G0093200 Salix brachista HOM05D007423 ORTHO05D009091 1.2e-09 68.6 371 24.8
Aa31LG9G13280 Aethionema arabicum HOM05D007423 ORTHO05D009091 3.6e-09 67.0 395 24.6
Mapoly0005s0140 Marchantia polymorpha HOM05D002809 ORTHO05D004563 5.2e-08 63.2 395 24.6
BcaC04g21943 Brassica carinata HOM05D007423 ORTHO05D009091 8.9e-08 62.4 320 26.2
BolC9t55461H Brassica oleracea HOM05D007423 ORTHO05D009091 8.9e-08 62.4 320 26.2
A09p20200 Brassica napus HOM05D007423 ORTHO05D009091 1.2e-07 62.0 324 26.5
Pp3c3_5460 Physcomitrium patens HOM05D002809 ORTHO05D004563 2.0e-07 61.2 397 24.2
Sp2g08010 Schrenkiella parvula HOM05D007423 ORTHO05D009091 2.0e-07 61.2 326 26.1
C09p25610 Brassica napus HOM05D007423 ORTHO05D009091 2.6e-07 60.8 327 26.3
TAR381G1462 Trochodendron aralioides HOM05D007423 ORTHO05D009091 3.4e-07 60.5 326 23.9
Cpa.g.c34911 Carica papaya HOM05D007423 ORTHO05D009091 4.4e-07 60.1 372 23.4
PGR042G0461 Punica granatum HOM05D003005 ORTHO05D004170 4.4e-07 60.1 410 23.9
SGA_v2.0_scaffold17G07917 Striga asiatica HOM05D006114 ORTHO05D007609 4.4e-07 60.1 143 35.0
BraA09t37631Z Brassica rapa HOM05D007423 ORTHO05D009091 5.7e-07 59.7 324 26.2
QL12p038053 Quercus lobata HOM05D007423 ORTHO05D009091 7.5e-07 59.3 319 25.4
AT5G43190 Arabidopsis thaliana HOM05D007423 ORTHO05D009091 1.3e-06 58.5 322 25.5
DCAR_020047 Daucus carota HOM05D007423 ORTHO05D009091 1.3e-06 58.5 391 22.8
SalBow7G0003 Salvia bowleyana HOM05D007423 ORTHO05D009091 3.7e-06 57.0 108 36.1
Nn5g28167 Nelumbo nucifera HOM05D002809 ORTHO05D004939 4.9e-06 56.6 366 21.9
Potri.014G016200 Populus trichocarpa HOM05D007423 ORTHO05D009091 4.9e-06 56.6 321 25.5
SEGI_31123 Sequoiadendron giganteum HOM05D017074 ORTHO05D019364 4.9e-06 56.6 198 24.7
THA.LOC104814189 Tarenaya hassleriana HOM05D007423 ORTHO05D009091 6.3e-06 56.2 146 31.5
Carub.0008s0548 Capsella rubella HOM05D007423 ORTHO05D009091 8.3e-06 55.8 326 26.4
Sc20g0003450 Simmondsia chinensis HOM05D006114 ORTHO05D007609 8.3e-06 55.8 45 60.0


User provided reference genes

Program Settings