Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_27221_v3 Cicer arietinum L. HOM05D006298 ORTHO05D008167 2.9e-34 147.9 71 100.0
Ca_11509_v3 Cicer arietinum L. HOM05D006298 ORTHO05D008167 5.8e-30 133.7 69 92.8
Medtr1g063100 Medicago truncatula HOM05D006298 ORTHO05D008167 2.7e-19 98.2 68 69.1
Phvul.007G147500 Phaseolus vulgaris HOM05D006298 ORTHO05D008167 2.7e-19 98.2 66 69.7
TPR.G11270 Trifolium pratense HOM05D006298 ORTHO05D008167 6.0e-19 97.1 71 69.0
Haze_20529 Corylus avellana HOM05D006298 ORTHO05D008167 1.3e-18 95.9 65 69.2
VMungo0720G2332 Vigna mungo HOM05D006298 ORTHO05D008167 1.7e-18 95.5 66 68.2
Cfa017623 Carpinus fangiana HOM05D006298 ORTHO05D008167 3.0e-18 94.7 65 67.7
Lj4g0025039 Lotus japonicus HOM05D006298 ORTHO05D008167 3.0e-18 94.7 70 68.6
AT2G36895 Arabidopsis thaliana HOM05D006298 ORTHO05D008167 5.1e-18 94.0 69 59.4
PGR142G1273 Punica granatum HOM05D006298 ORTHO05D008167 1.1e-17 92.8 67 68.7
Carub.0004s1875 Capsella rubella HOM05D006298 ORTHO05D008167 3.3e-17 91.3 68 58.8
Psat6g073640 Pisum sativum HOM05D006298 ORTHO05D008167 5.6e-17 90.5 58 72.4
Aa31LG5G22130 Aethionema arabicum HOM05D006298 ORTHO05D008167 1.2e-16 89.4 65 56.9
CiPaw.09G171800 Carya illinoinensis HOM05D006298 ORTHO05D008167 1.6e-16 89.0 67 64.2
THA.LOC104805233 Tarenaya hassleriana HOM05D006298 ORTHO05D008167 6.2e-16 87.0 62 61.3
ClCG10G020070 Citrullus lanatus HOM05D006298 ORTHO05D008167 1.1e-15 86.3 65 61.5
CsaV3_3G036020 Cucumis sativus L. HOM05D006298 ORTHO05D008167 1.1e-15 86.3 65 64.6
Thhalv10017183m.g Eutrema salsugineum HOM05D006298 ORTHO05D008167 1.4e-15 85.9 65 58.5
Sp4g19190 Schrenkiella parvula HOM05D006298 ORTHO05D008167 1.4e-15 85.9 65 58.5
Gohir.D01G130400 Gossypium hirsutum HOM05D006298 ORTHO05D008167 3.1e-15 84.7 63 63.5
Gorai.002G161800 Gossypium raimondii HOM05D006298 ORTHO05D008167 3.1e-15 84.7 63 63.5
Thecc.05G068100 Theobroma cacao HOM05D006298 ORTHO05D008167 3.1e-15 84.7 65 61.5
THA.LOC104807061 Tarenaya hassleriana HOM05D006298 ORTHO05D008167 4.0e-15 84.3 61 60.7
COL.COLO4_26951 Corchorus olitorius HOM05D006298 ORTHO05D008167 5.2e-15 84.0 66 63.6
Gohir.A01G141763 Gossypium hirsutum HOM05D006298 ORTHO05D008167 6.8e-15 83.6 63 63.5
RcHm_v2.0_Chr3g0470361 Rosa chinensis HOM05D006298 ORTHO05D008167 6.8e-15 83.6 65 66.2
FvH4_6g16470 Fragaria vesca HOM05D006298 ORTHO05D008167 8.9e-15 83.2 65 66.2
FAN02G1782 Fragaria x ananassa HOM05D006298 ORTHO05D008167 8.9e-15 83.2 65 66.2
FAN09G1272 Fragaria x ananassa HOM05D006298 ORTHO05D008167 8.9e-15 83.2 65 66.2
FAN14G4061 Fragaria x ananassa HOM05D006298 ORTHO05D008167 8.9e-15 83.2 65 66.2
Prupe.7G128900 Prunus persica HOM05D006298 ORTHO05D008167 1.5e-14 82.4 66 65.2
TAR623G0635 Trochodendron aralioides HOM05D006298 ORTHO05D008167 1.5e-14 82.4 67 58.2
Duzib106G2039 Durio zibethinus HOM05D006298 ORTHO05D008167 2.0e-14 82.0 65 60.0
MD04G1092500 Malus domestica HOM05D006298 ORTHO05D008167 2.0e-14 82.0 66 59.1
Potri.016G099300 Populus trichocarpa HOM05D006298 ORTHO05D008167 2.0e-14 82.0 65 56.9
CSS0011355 Camellia sinensis var. sinensis HOM05D006298 ORTHO05D008167 3.4e-14 81.3 70 55.7
QL07p043135 Quercus lobata HOM05D006298 ORTHO05D008167 3.4e-14 81.3 66 60.6
Sabra16G0098900 Salix brachista HOM05D006298 ORTHO05D008167 4.4e-14 80.9 65 55.4
FAN05G1999 Fragaria x ananassa HOM05D006298 ORTHO05D008167 5.8e-14 80.5 65 64.6
FAN05G2800 Fragaria x ananassa HOM05D006298 ORTHO05D008167 5.8e-14 80.5 65 64.6
BcaB06g28958 Brassica carinata HOM05D006298 ORTHO05D008167 1.3e-13 79.3 65 56.9
A04p28210 Brassica napus HOM05D006298 ORTHO05D008167 1.3e-13 79.3 65 55.4
C04p65570 Brassica napus HOM05D006298 ORTHO05D008167 1.3e-13 79.3 65 55.4
TWI53G1706 Tripterygium wilfordii HOM05D006298 ORTHO05D008167 1.3e-13 79.3 65 58.5
TWI77G0409 Tripterygium wilfordii HOM05D006298 ORTHO05D008167 1.3e-13 79.3 60 61.7
Duzib093G1320 Durio zibethinus HOM05D006298 ORTHO05D008167 1.7e-13 79.0 65 56.9
Lalb_Chr21g0315031 Lupinus albus HOM05D006298 ORTHO05D008167 2.2e-13 78.6 59 64.4
CSS0035285 Camellia sinensis var. sinensis HOM05D006298 ORTHO05D008167 2.9e-13 78.2 70 54.3
Actinidia28907 Actinidia chinensis HOM05D006298 ORTHO05D008167 4.9e-13 77.4 68 55.9
CANSAT80G2892 Cannabis sativa HOM05D006298 ORTHO05D008167 4.9e-13 77.4 65 61.5
Eucgr.K02926 Eucalyptus grandis HOM05D006298 ORTHO05D008167 4.9e-13 77.4 69 55.1
Hma1.2p1_0205F.1_g086930 Hydrangea macrophylla HOM05D006298 ORTHO05D008167 4.9e-13 77.4 67 56.7
BolC4t28046H Brassica oleracea HOM05D006298 ORTHO05D008167 6.4e-13 77.0 63 55.6
Cpa.g.sc102.32 Carica papaya HOM05D006298 ORTHO05D008167 6.4e-13 77.0 63 57.1
BraA04t18305Z Brassica rapa HOM05D006298 ORTHO05D008167 8.3e-13 76.6 65 53.8
Sed0010557 Sechium edule HOM05D006298 ORTHO05D008167 1.1e-12 76.3 65 61.5
BcaC02g07569 Brassica carinata HOM05D006298 ORTHO05D008167 1.4e-12 75.9 60 56.7
BcaC02g07571 Brassica carinata HOM05D006298 ORTHO05D008167 1.4e-12 75.9 60 56.7
arahy.Tifrunner.gnm1.ann1.GSM08A Arachis hypogaea HOM05D006298 ORTHO05D008167 1.9e-12 75.5 54 66.7
arahy.Tifrunner.gnm1.ann1.UZM884 Arachis hypogaea HOM05D006298 ORTHO05D008167 1.9e-12 75.5 54 66.7
GSVIVG01033647001 Vitis vinifera HOM05D006298 ORTHO05D008167 1.9e-12 75.5 65 60.0
Manes.08G011200 Manihot esculenta HOM05D006298 ORTHO05D008167 2.4e-12 75.1 65 55.4
Rhsim03G0091000 Rhododendron simsii HOM05D006298 ORTHO05D008167 2.4e-12 75.1 63 60.3
Dinv35789 Davidia involucrata HOM05D006298 ORTHO05D008167 3.2e-12 74.7 69 52.2
BcaB01g03809 Brassica carinata HOM05D006298 ORTHO05D008167 5.4e-12 73.9 49 57.1
Hma1.2p1_0205F.1_g086920 Hydrangea macrophylla HOM05D006298 ORTHO05D008167 1.2e-11 72.8 61 57.4
Ca_27663_v3 Cicer arietinum L. HOM05D002033 ORTHO05D002181 2.1e-11 72.0 39 87.2
Cc06_g04290 Coffea canephora HOM05D006298 ORTHO05D008167 2.1e-11 72.0 69 52.2
Actinidia08768 Actinidia chinensis HOM05D006298 ORTHO05D008167 6.0e-11 70.5 67 49.3
Lj2A120T46 Lonicera japonica HOM05D006298 ORTHO05D008167 6.0e-11 70.5 66 53.0
Ciclev10012651m.g Citrus clementina HOM05D006298 ORTHO05D008167 1.0e-10 69.7 64 54.7
DCAR_017674 Daucus carota HOM05D006298 ORTHO05D008167 1.0e-10 69.7 71 52.1
SGA_v2.0_scaffold40G15525 Striga asiatica HOM05D006298 ORTHO05D008167 1.3e-10 69.3 66 54.5
Aqoxy1G01145 Aquilegia oxysepala HOM05D006298 ORTHO05D008167 1.7e-10 68.9 69 49.3
Migut.J00651 Erythranthe guttata HOM05D006298 ORTHO05D008167 2.3e-10 68.6 64 53.1
Oeu053684.1 Olea europaea HOM05D006298 ORTHO05D008167 3.0e-10 68.2 71 52.1
Glyma.10G054900 Glycine max HOM05D006298 ORTHO05D008167 8.6e-10 66.6 68 48.5
PSO063G5537 Papaver somniferum HOM05D006298 ORTHO05D008167 8.6e-10 66.6 72 48.6
PGSC0003DMG400028288 Solanum tuberosum HOM05D006298 ORTHO05D008167 2.5e-09 65.1 68 47.1
PSO339G0145 Papaver somniferum HOM05D006298 ORTHO05D008167 4.3e-09 64.3 72 45.8
Sc20g0005540 Simmondsia chinensis HOM05D006298 ORTHO05D008167 4.3e-09 64.3 70 44.3
Sopen10g033440 Solanum pennellii HOM05D006298 ORTHO05D008167 4.3e-09 64.3 68 47.1
Solyc10g083990.2 Solanum lycopersicum HOM05D006298 ORTHO05D008167 7.3e-09 63.5 68 47.1
Nitab4.5_0000063g0130 Nicotiana tabacum HOM05D006298 ORTHO05D008167 1.2e-08 62.8 71 46.5
Nitab4.5_0000814g0050 Nicotiana tabacum HOM05D006298 ORTHO05D008167 1.2e-08 62.8 68 47.1
EL10Ac7g16640 Beta vulgaris HOM05D006298 ORTHO05D008167 1.6e-08 62.4 69 44.9
HanXRQChr11g0350481 Helianthus annuus HOM05D006298 ORTHO05D008167 1.6e-08 62.4 69 44.9
CDE04G2630 Ceratophyllum demersum HOM05D006298 ORTHO05D008167 2.1e-08 62.0 63 47.6
Os03g0152600 Oryza sativa ssp. japonica HOM05D006298 ORTHO05D008167 2.8e-08 61.6 76 42.1
Lsat_1_v5_gn_1_51681 Lactuca sativa HOM05D006298 ORTHO05D008167 3.6e-08 61.2 60 51.7
CDE03G0133 Ceratophyllum demersum HOM05D006298 ORTHO05D008167 8.1e-08 60.1 57 47.4
Glyma.13G142000 Glycine max HOM05D006298 ORTHO05D008167 8.1e-08 60.1 36 69.4
MBI18_g02636_MAGBIO Magnolia biondii HOM05D006298 ORTHO05D008167 1.1e-07 59.7 69 40.6
Ah.08g211590 Amaranthus hybridus HOM05D006298 ORTHO05D008167 1.4e-07 59.3 73 42.5
ATR0219G012 Amborella trichopoda HOM05D006298 ORTHO05D008167 1.4e-07 59.3 68 48.5
Zm00001eb403160 Zea mays HOM05D006298 ORTHO05D008167 1.4e-07 59.3 75 41.3
AUR62040336 Chenopodium quinoa HOM05D006298 ORTHO05D008167 2.4e-07 58.5 69 43.5
HPP92_022584 Vanilla planifolia HOM05D006298 ORTHO05D008167 8.9e-07 56.6 69 39.1
AUR62042070 Chenopodium quinoa HOM05D006298 ORTHO05D008167 1.2e-06 56.2 67 44.8
AUR62044331 Chenopodium quinoa HOM05D006298 ORTHO05D008167 1.2e-06 56.2 67 44.8
Peaxi162Scf00311g01110 Petunia axillaris HOM05D006298 ORTHO05D008167 2.0e-06 55.5 62 46.8
arahy.Tifrunner.gnm1.ann1.31G0Q2 Arachis hypogaea HOM05D006298 ORTHO05D082484 3.4e-06 54.7 35 65.7
vmacro07297 Vaccinium macrocarpon HOM05D006298 ORTHO05D008167 3.4e-06 54.7 32 71.9


User provided reference genes

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