Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_27173_v3 Cicer arietinum L. HOM05D009527 ORTHO05D013850 5.3e-59 230.7 108 100.0
TPR.G36084 Trifolium pratense HOM05D009527 ORTHO05D013850 3.8e-25 118.2 83 65.1
TPR.G8499 Trifolium pratense HOM05D028375 ORTHO05D008640 6.5e-25 117.5 105 55.2
TPR.G27263 Trifolium pratense HOM05D009527 ORTHO05D013850 4.2e-24 114.8 85 64.7
TPR.G34485 Trifolium pratense HOM05D009527 ORTHO05D013850 4.2e-24 114.8 85 64.7
TPR.G34991 Trifolium pratense HOM05D009527 ORTHO05D013850 5.5e-24 114.4 83 61.4
TPR.G18519 Trifolium pratense HOM05D009527 ORTHO05D013850 2.1e-23 112.5 84 63.1
Medtr1g115165 Medicago truncatula HOM05D009527 ORTHO05D013850 2.3e-22 109.0 86 58.1
Medtr6g007360 Medicago truncatula HOM05D009527 ORTHO05D013850 2.3e-22 109.0 86 58.1
TPR.G26515 Trifolium pratense HOM05D009527 ORTHO05D013850 4.4e-21 104.8 86 55.8
Medtr4g078180 Medicago truncatula HOM05D009527 ORTHO05D013850 5.7e-21 104.4 86 55.8
Ca_25152_v3 Cicer arietinum L. HOM05D002770 ORTHO05D003011 1.8e-19 99.4 100 44.0
TPR.G38395 Trifolium pratense HOM05D009527 ORTHO05D013850 1.4e-16 89.7 69 53.6
Ca_12972_v3 Cicer arietinum L. HOM05D003122 ORTHO05D010195 4.7e-15 84.7 78 47.4
Ca_16686_v3 Cicer arietinum L. HOM05D009527 ORTHO05D013850 1.0e-14 83.6 78 46.2
VMungo0251G2087 Vigna mungo HOM05D009527 ORTHO05D010195 1.4e-14 83.2 80 48.8
VMungo0464G0875 Vigna mungo HOM05D003387 ORTHO05D005400 3.0e-14 82.0 88 43.2
VMungo0251G0994 Vigna mungo HOM05D002797 ORTHO05D010195 1.1e-13 80.1 76 47.4
VMungo1383G3216 Vigna mungo HOM05D001447 ORTHO05D010195 3.3e-13 78.6 76 44.7
Medtr3g022250 Medicago truncatula HOM05D009527 ORTHO05D013850 5.7e-13 77.8 86 45.3
Ca_12114_v3 Cicer arietinum L. HOM05D003122 ORTHO05D010195 9.7e-13 77.0 103 36.9
VMungo1080G0040 Vigna mungo HOM05D003438 ORTHO05D000002 9.7e-13 77.0 77 44.2
VMungo0331G1288 Vigna mungo HOM05D004910 ORTHO05D010195 1.7e-12 76.3 78 41.0
VMungo0251G0341 Vigna mungo HOM05D000660 ORTHO05D010195 1.1e-11 73.6 98 37.8
VMungo1080G1902 Vigna mungo HOM05D000054 ORTHO05D010195 2.4e-11 72.4 75 45.3
VMungo0647G0580 Vigna mungo HOM05D000660 ORTHO05D010195 3.1e-11 72.0 75 41.3
Lalb_Chr12g0204601 Lupinus albus HOM05D003122 ORTHO05D000002 5.3e-11 71.2 76 42.1
THA.LOC104801707 Tarenaya hassleriana HOM05D008905 ORTHO05D000002 5.3e-11 71.2 77 40.3
VMungo1309G2709 Vigna mungo HOM05D000618 ORTHO05D010195 5.3e-11 71.2 75 41.3
Ca_05816_v3 Cicer arietinum L. HOM05D003122 ORTHO05D000002 7.0e-11 70.9 76 40.8
VMungo0720G0600 Vigna mungo HOM05D001082 ORTHO05D010195 9.1e-11 70.5 80 40.0
Ca_07114_v3 Cicer arietinum L. HOM05D003122 ORTHO05D000002 1.2e-10 70.1 76 40.8
VMungo0331G1449 Vigna mungo HOM05D009527 ORTHO05D010195 1.6e-10 69.7 74 40.5
VMungo0464G1634 Vigna mungo HOM05D012939 ORTHO05D010195 1.6e-10 69.7 75 42.7
VMungo1127G2266 Vigna mungo HOM05D009527 ORTHO05D010195 2.0e-10 69.3 75 40.0
Ca_06552_v3 Cicer arietinum L. HOM05D003122 ORTHO05D000002 3.5e-10 68.6 76 39.5
Medtr7g446320 Medicago truncatula HOM05D009527 ORTHO05D013850 3.5e-10 68.6 54 61.1
VMungo0251G3700 Vigna mungo HOM05D003122 ORTHO05D000002 5.9e-10 67.8 76 39.5
VMungo1383G2683 Vigna mungo HOM05D003122 ORTHO05D000002 5.9e-10 67.8 74 39.2
Psat3g115000 Pisum sativum HOM05D003122 ORTHO05D000002 7.7e-10 67.4 75 42.7
THA.LOC104815241 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 7.7e-10 67.4 77 33.8
Sp3g28830 Schrenkiella parvula HOM05D000004 ORTHO05D000002 1.0e-09 67.0 73 38.4
TPR.G20516 Trifolium pratense HOM05D003122 ORTHO05D000002 1.0e-09 67.0 76 40.8
Ca_13622_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 1.3e-09 66.6 75 40.0
Phvul.004G009341 Phaseolus vulgaris HOM05D007358 ORTHO05D009117 1.3e-09 66.6 77 37.7
Ca_19227_v3 Cicer arietinum L. HOM05D003122 ORTHO05D000002 1.7e-09 66.2 75 40.0
Ca_27418_v3 Cicer arietinum L. HOM05D003122 ORTHO05D000002 1.7e-09 66.2 74 36.5
VMungo0647G1598 Vigna mungo HOM05D002051 ORTHO05D002041 1.7e-09 66.2 73 39.7
VMungo1383G1168 Vigna mungo HOM05D000140 ORTHO05D010195 1.7e-09 66.2 76 42.1
Ca_14374_v3 Cicer arietinum L. HOM05D003122 ORTHO05D000002 3.8e-09 65.1 76 38.2
Phvul.001G091900 Phaseolus vulgaris HOM05D003122 ORTHO05D000002 3.8e-09 65.1 76 36.8
TPR.G21966 Trifolium pratense HOM05D001021 ORTHO05D000894 3.8e-09 65.1 76 35.5
VMungo1080G0003 Vigna mungo HOM05D005948 ORTHO05D007689 3.8e-09 65.1 74 40.5
VMungo1080G1583 Vigna mungo HOM05D001060 ORTHO05D010195 3.8e-09 65.1 75 38.7
VMungo1127G0474 Vigna mungo HOM05D009527 ORTHO05D010195 3.8e-09 65.1 77 39.0
Ca_23810_v3 Cicer arietinum L. HOM05D003122 ORTHO05D000002 6.5e-09 64.3 73 39.7
ECA236G3521 Erigeron canadensis HOM05D000004 ORTHO05D000002 6.5e-09 64.3 73 39.7
ECA240G3042 Erigeron canadensis HOM05D000004 ORTHO05D000002 6.5e-09 64.3 73 39.7
Psat0s2139g0080 Pisum sativum HOM05D003122 ORTHO05D000002 6.5e-09 64.3 75 42.7
Psat5g054960 Pisum sativum HOM05D003122 ORTHO05D000002 6.5e-09 64.3 77 40.3
Psat5g016360 Pisum sativum HOM05D000004 ORTHO05D000002 8.5e-09 63.9 82 36.6
VMungo0251G1446 Vigna mungo HOM05D012939 ORTHO05D010195 8.5e-09 63.9 83 34.9
Psat7g152800 Pisum sativum HOM05D000004 ORTHO05D000002 1.1e-08 63.5 77 37.7
VMungo0720G2098 Vigna mungo HOM05D004618 ORTHO05D005318 1.1e-08 63.5 78 37.2
Ca_01724_v3 Cicer arietinum L. HOM05D003122 ORTHO05D000002 1.5e-08 63.2 73 38.4
TAR643G0001 Trochodendron aralioides HOM05D000004 ORTHO05D000002 1.9e-08 62.8 83 34.9
Ca_25971_v3 Cicer arietinum L. HOM05D001297 ORTHO05D001135 2.5e-08 62.4 75 37.3
Psat0s2745g0200 Pisum sativum HOM05D003122 ORTHO05D000002 2.5e-08 62.4 75 41.3
TPR.G17488 Trifolium pratense HOM05D000004 ORTHO05D000002 2.5e-08 62.4 96 33.3
VMungo0720G0378 Vigna mungo HOM05D012939 ORTHO05D010195 2.5e-08 62.4 82 36.6
Ca_12127_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 3.2e-08 62.0 95 34.7
VMungo1127G0526 Vigna mungo HOM05D002312 ORTHO05D007981 3.2e-08 62.0 75 37.3
VMungo1127G0760 Vigna mungo HOM05D012939 ORTHO05D010195 4.2e-08 61.6 80 35.0
Ca_14682_v3 Cicer arietinum L. HOM05D003122 ORTHO05D000002 5.5e-08 61.2 77 35.1
Psat0s1287g0080 Pisum sativum HOM05D000004 ORTHO05D000002 5.5e-08 61.2 82 32.9
VMungo0540G2200 Vigna mungo HOM05D009527 ORTHO05D010195 7.2e-08 60.8 75 36.0
Ca_22816_v3 Cicer arietinum L. HOM05D003122 ORTHO05D000002 9.4e-08 60.5 75 37.3
Hma1.2p1_0812F.1_g222280 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 9.4e-08 60.5 85 32.9
Psat7g163640 Pisum sativum HOM05D003122 ORTHO05D000002 9.4e-08 60.5 74 37.8
Sp3g28500 Schrenkiella parvula HOM05D000004 ORTHO05D000002 9.4e-08 60.5 72 34.7
TPR.G6695 Trifolium pratense HOM05D000004 ORTHO05D000002 9.4e-08 60.5 73 37.0
Psat3g172640 Pisum sativum HOM05D000028 ORTHO05D000390 1.2e-07 60.1 101 31.7
VMungo0720G1249 Vigna mungo HOM05D000002 ORTHO05D000047 1.2e-07 60.1 83 33.7
Ca_12976_v3 Cicer arietinum L. HOM05D003122 ORTHO05D012218 1.6e-07 59.7 75 36.0
Psat2g149640 Pisum sativum HOM05D003122 ORTHO05D000002 1.6e-07 59.7 73 38.4
TPR.G31865 Trifolium pratense HOM05D000004 ORTHO05D000002 1.6e-07 59.7 73 37.0
TWI15G0520 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 1.6e-07 59.7 77 32.5
BcaC09g48121 Brassica carinata HOM05D061184 ORTHO05D000002 2.1e-07 59.3 83 34.9
Ca_12199_v3 Cicer arietinum L. HOM05D003122 ORTHO05D000002 2.1e-07 59.3 78 34.6
HanXRQChr05g0142391 Helianthus annuus HOM05D003122 ORTHO05D000002 2.1e-07 59.3 79 36.7
Manes.03G212950 Manihot esculenta HOM05D003122 ORTHO05D000002 2.1e-07 59.3 74 32.4
PSO832G0807 Papaver somniferum HOM05D000004 ORTHO05D000002 2.1e-07 59.3 70 38.6
Psat4g137240 Pisum sativum HOM05D000004 ORTHO05D000002 2.1e-07 59.3 96 32.3
VMungo0720G2490 Vigna mungo HOM05D012939 ORTHO05D010195 2.1e-07 59.3 73 38.4
Ca_12309_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 2.7e-07 58.9 81 32.1
Psat1g213840 Pisum sativum HOM05D000004 ORTHO05D000002 2.7e-07 58.9 82 30.5
QL10p040115 Quercus lobata HOM05D000004 ORTHO05D000002 2.7e-07 58.9 74 36.5
Ca_11127_v3 Cicer arietinum L. HOM05D001650 ORTHO05D001592 3.6e-07 58.5 81 32.1
Ca_16129_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 3.6e-07 58.5 95 30.5
Ca_27463_v3 Cicer arietinum L. HOM05D003122 ORTHO05D000002 4.7e-07 58.2 97 33.0
ECA234G4583 Erigeron canadensis HOM05D000004 ORTHO05D000002 4.7e-07 58.2 72 37.5
CANSAT35G0070 Cannabis sativa HOM05D000004 ORTHO05D000002 6.1e-07 57.8 72 37.5
ECA238G4401 Erigeron canadensis HOM05D000004 ORTHO05D000002 6.1e-07 57.8 73 35.6
Psat6g093200 Pisum sativum HOM05D000004 ORTHO05D000002 6.1e-07 57.8 72 36.1
QL10p043279 Quercus lobata HOM05D000004 ORTHO05D000002 6.1e-07 57.8 74 36.5
BcaB04g17630 Brassica carinata HOM05D008905 ORTHO05D000002 8.0e-07 57.4 78 32.1
Ca_16100_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 8.0e-07 57.4 81 34.6
Ca_22822_v3 Cicer arietinum L. HOM05D003606 ORTHO05D000002 8.0e-07 57.4 81 32.1
Psat0s1551g0120 Pisum sativum HOM05D000004 ORTHO05D000002 8.0e-07 57.4 73 35.6
Psat1g072000 Pisum sativum HOM05D000004 ORTHO05D000002 8.0e-07 57.4 72 36.1
Psat3g181760 Pisum sativum HOM05D000004 ORTHO05D000002 8.0e-07 57.4 72 36.1
Psat3g181800 Pisum sativum HOM05D000004 ORTHO05D000002 8.0e-07 57.4 72 36.1
Psat3g197960 Pisum sativum HOM05D000004 ORTHO05D000002 8.0e-07 57.4 73 35.6
Psat7g263080 Pisum sativum HOM05D003122 ORTHO05D000002 8.0e-07 57.4 74 36.5
VMungo0464G0549 Vigna mungo HOM05D001615 ORTHO05D001493 8.0e-07 57.4 67 40.3
ECA232G1984 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.0e-06 57.0 73 31.5
Psat2g029440 Pisum sativum HOM05D000004 ORTHO05D000002 1.0e-06 57.0 72 36.1
Psat5g213280 Pisum sativum HOM05D000004 ORTHO05D000002 1.0e-06 57.0 100 30.0
VMungo0464G1208 Vigna mungo HOM05D000004 ORTHO05D000002 1.0e-06 57.0 74 33.8
VMungo0720G2070 Vigna mungo HOM05D012939 ORTHO05D010195 1.0e-06 57.0 64 40.6
VMungo1127G1769 Vigna mungo HOM05D003938 ORTHO05D004759 1.0e-06 57.0 81 29.6
ECA238G2583 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.4e-06 56.6 73 37.0
Manes.08G059801 Manihot esculenta HOM05D000004 ORTHO05D000002 1.4e-06 56.6 77 31.2
Manes.11G130716 Manihot esculenta HOM05D000004 ORTHO05D000002 1.4e-06 56.6 77 31.2
Manes.17G059650 Manihot esculenta HOM05D003122 ORTHO05D010195 1.4e-06 56.6 71 36.6
Psat2g032840 Pisum sativum HOM05D000004 ORTHO05D000002 1.4e-06 56.6 72 34.7
Sopen00g004920 Solanum pennellii HOM05D000004 ORTHO05D000002 1.4e-06 56.6 78 33.3
Ca_07517_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 1.8e-06 56.2 77 32.5
ECA232G0044 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.8e-06 56.2 78 32.1
TWI09G0429 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 1.8e-06 56.2 85 30.6
Ca_03006_v3 Cicer arietinum L. HOM05D003122 ORTHO05D000002 2.3e-06 55.8 74 33.8
Psat6g022920 Pisum sativum HOM05D000004 ORTHO05D000002 2.3e-06 55.8 96 30.2
CSS0049798 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.0e-06 55.5 73 34.2
Ca_19472_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 3.0e-06 55.5 81 29.6
Ca_19490_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 3.0e-06 55.5 95 29.5
Psat5g191920 Pisum sativum HOM05D000004 ORTHO05D000002 3.0e-06 55.5 79 31.6
Psat6g169440 Pisum sativum HOM05D012325 ORTHO05D013858 3.0e-06 55.5 75 36.0
CAN.G824.35 Capsicum annuum HOM05D000004 ORTHO05D000002 4.0e-06 55.1 73 32.9
CAN.G845.6 Capsicum annuum HOM05D000004 ORTHO05D000002 4.0e-06 55.1 73 32.9
Ca_27450_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 4.0e-06 55.1 81 29.6
ECA232G3180 Erigeron canadensis HOM05D000004 ORTHO05D000002 4.0e-06 55.1 76 35.5
ECA232G4751 Erigeron canadensis HOM05D000004 ORTHO05D000002 4.0e-06 55.1 76 35.5
Psat5g155160 Pisum sativum HOM05D000004 ORTHO05D000002 4.0e-06 55.1 100 29.0
Psat5g253800 Pisum sativum HOM05D000004 ORTHO05D000002 4.0e-06 55.1 72 34.7
Psat6g208920 Pisum sativum HOM05D000004 ORTHO05D000002 4.0e-06 55.1 73 34.2
Psat7g007480 Pisum sativum HOM05D000004 ORTHO05D000002 4.0e-06 55.1 100 29.0
QL12p011078 Quercus lobata HOM05D000432 ORTHO05D000002 4.0e-06 55.1 73 30.1
THA.LOC104809111 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 4.0e-06 55.1 78 30.8
VMungo0540G2247 Vigna mungo HOM05D002022 ORTHO05D010195 4.0e-06 55.1 73 38.4
Ca_05479_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 5.2e-06 54.7 75 34.7
Ca_07639_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 5.2e-06 54.7 95 29.5
Ca_20328_v3 Cicer arietinum L. HOM05D000004 ORTHO05D010195 5.2e-06 54.7 71 38.0
ECA232G0632 Erigeron canadensis HOM05D003187 ORTHO05D003630 5.2e-06 54.7 76 35.5
Psat0s3835g0040 Pisum sativum HOM05D000004 ORTHO05D000002 5.2e-06 54.7 72 34.7
Psat3g027240 Pisum sativum HOM05D000004 ORTHO05D000002 5.2e-06 54.7 79 32.9
Psat5g213880 Pisum sativum HOM05D000004 ORTHO05D000002 5.2e-06 54.7 72 34.7
Psat7g066480 Pisum sativum HOM05D000004 ORTHO05D000002 5.2e-06 54.7 73 30.1
Ca_26104_v3 Cicer arietinum L. HOM05D000459 ORTHO05D000798 6.7e-06 54.3 36 61.1
COL.COLO4_19395 Corchorus olitorius HOM05D000004 ORTHO05D000002 6.7e-06 54.3 73 35.6
FvH4_7g29722 Fragaria vesca HOM05D000004 ORTHO05D000002 6.7e-06 54.3 73 37.0
Psat2g165880 Pisum sativum HOM05D000004 ORTHO05D000002 6.7e-06 54.3 72 34.7
AL6G32420 Arabidopsis lyrata HOM05D008905 ORTHO05D000002 8.8e-06 53.9 73 32.9
Ca_12969_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 8.8e-06 53.9 82 31.7
Nn6g31876 Nelumbo nucifera HOM05D000004 ORTHO05D000002 8.8e-06 53.9 73 34.2
TWI31G1488 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 8.8e-06 53.9 82 30.5
TWI34G0287 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 8.8e-06 53.9 82 30.5
TWI38G0029 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 8.8e-06 53.9 82 30.5
TWI81G0785 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 8.8e-06 53.9 82 30.5


User provided reference genes

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