Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_27172_v3 Cicer arietinum L. HOM05D003920 ORTHO05D004877 7.5e-203 710.3 358 100.0
Medtr3g028190 Medicago truncatula HOM05D003920 ORTHO05D004877 9.5e-190 666.8 358 93.9
Psat5g204200 Pisum sativum HOM05D003920 ORTHO05D004877 2.3e-188 662.1 358 93.0
TPR.G12140 Trifolium pratense HOM05D003920 ORTHO05D004877 8.1e-181 637.1 346 91.3
Lj3g0003225 Lotus japonicus HOM05D003920 ORTHO05D004877 1.2e-173 613.2 358 85.8
Lalb_Chr01g0015291 Lupinus albus HOM05D003920 ORTHO05D004877 6.9e-172 607.4 356 85.7
Glyma.08G153800 Glycine max HOM05D003920 ORTHO05D004877 8.4e-170 600.5 362 82.6
Glyma.15G272400 Glycine max HOM05D003920 ORTHO05D004877 2.4e-169 599.0 362 83.7
arahy.Tifrunner.gnm1.ann1.Z50281 Arachis hypogaea HOM05D003920 ORTHO05D004877 4.2e-169 598.2 359 83.3
arahy.Tifrunner.gnm1.ann1.LBVL0K Arachis hypogaea HOM05D003920 ORTHO05D004877 1.9e-166 589.3 358 83.0
Phvul.005G019900 Phaseolus vulgaris HOM05D003920 ORTHO05D004877 4.3e-166 588.2 362 81.5
VMungo1080G0709 Vigna mungo HOM05D003920 ORTHO05D004877 2.8e-165 585.5 362 80.7
Dinv43454 Davidia involucrata HOM05D003920 ORTHO05D004877 1.1e-148 530.4 361 74.5
Manes.10G144700 Manihot esculenta HOM05D003920 ORTHO05D004877 7.6e-147 524.2 363 73.8
Potri.001G268200 Populus trichocarpa HOM05D003920 ORTHO05D004877 3.2e-145 518.8 359 72.4
Prupe.2G011700 Prunus persica HOM05D003920 ORTHO05D004877 1.2e-144 516.9 368 73.1
Sabra09G0046300 Salix brachista HOM05D003920 ORTHO05D004877 1.0e-143 513.8 361 71.5
Sabra16G0164300 Salix brachista HOM05D003920 ORTHO05D004877 6.7e-143 511.1 359 71.6
MD02G1313900 Malus domestica HOM05D003920 ORTHO05D004877 8.7e-143 510.8 362 72.7
FAN06G2354 Fragaria x ananassa HOM05D003920 ORTHO05D004877 3.3e-142 508.8 362 72.1
FvH4_7g00890 Fragaria vesca HOM05D003920 ORTHO05D004877 5.7e-142 508.1 362 71.8
Gohir.D08G038400 Gossypium hirsutum HOM05D003920 ORTHO05D004877 5.7e-142 508.1 360 73.6
Gorai.004G036900 Gossypium raimondii HOM05D003920 ORTHO05D004877 3.7e-141 505.4 360 73.3
Gohir.A08G027700 Gossypium hirsutum HOM05D003920 ORTHO05D004877 1.4e-140 503.4 360 72.8
MD07G1008500 Malus domestica HOM05D003920 ORTHO05D004877 4.1e-140 501.9 363 73.0
Aqoxy2G00138 Aquilegia oxysepala HOM05D003920 ORTHO05D004877 2.6e-139 499.2 364 70.1
Nn2g15431 Nelumbo nucifera HOM05D003920 ORTHO05D004877 3.4e-139 498.8 356 70.2
Eucgr.J01264 Eucalyptus grandis HOM05D003920 ORTHO05D004877 5.9e-139 498.0 363 70.8
Peaxi162Scf00428g00618 Petunia axillaris HOM05D003920 ORTHO05D004877 1.3e-138 496.9 363 68.0
Rhsim07G0054700 Rhododendron simsii HOM05D003920 ORTHO05D004877 1.3e-138 496.9 353 70.8
Potri.009G062600 Populus trichocarpa HOM05D003920 ORTHO05D004877 3.8e-138 495.4 363 71.1
PSO384G3532 Papaver somniferum HOM05D003920 ORTHO05D004877 1.4e-137 493.4 363 69.4
PSO339G5616 Papaver somniferum HOM05D003920 ORTHO05D004877 4.2e-137 491.9 363 69.1
Nn7g36164 Nelumbo nucifera HOM05D003920 ORTHO05D004877 5.5e-137 491.5 361 69.3
Sopen10g011530 Solanum pennellii HOM05D003920 ORTHO05D004877 5.5e-137 491.5 360 68.6
CAN.G709.1 Capsicum annuum HOM05D003920 ORTHO05D004877 3.6e-136 488.8 355 70.1
DCAR_003208 Daucus carota HOM05D003920 ORTHO05D004877 4.6e-136 488.4 361 70.1
Solyc10g038000.3 Solanum lycopersicum HOM05D003920 ORTHO05D004877 7.9e-136 487.6 360 68.6
Peaxi162Scf00407g00639 Petunia axillaris HOM05D003920 ORTHO05D004877 1.0e-135 487.3 363 65.8
ECA248G0446 Erigeron canadensis HOM05D003920 ORTHO05D004877 5.1e-135 485.0 353 72.0
HanXRQChr01g0016141 Helianthus annuus HOM05D003920 ORTHO05D004877 1.1e-134 483.8 353 70.0
QL04p007133 Quercus lobata HOM05D003920 ORTHO05D004877 1.1e-134 483.8 327 75.2
Thhalv10010518m.g Eutrema salsugineum HOM05D003920 ORTHO05D004877 2.5e-134 482.6 356 68.5
TWI73G0359 Tripterygium wilfordii HOM05D003920 ORTHO05D004877 4.3e-134 481.9 378 65.1
TAR369G0176 Trochodendron aralioides HOM05D003920 ORTHO05D004877 1.1e-132 477.2 363 66.9
CARHR291420 Cardamine hirsuta HOM05D003920 ORTHO05D004877 4.1e-132 475.3 362 68.8
Migut.N01471 Erythranthe guttata HOM05D003920 ORTHO05D004877 4.1e-132 475.3 355 69.3
PGR044G2195 Punica granatum HOM05D003920 ORTHO05D004877 4.1e-132 475.3 363 67.2
Sed0011667 Sechium edule HOM05D003920 ORTHO05D004877 7.7e-131 471.1 361 66.2
CSS0030964 Camellia sinensis var. sinensis HOM05D003920 ORTHO05D004877 3.8e-130 468.8 327 73.1
Sp1g00020 Schrenkiella parvula HOM05D003920 ORTHO05D004877 3.8e-130 468.8 361 66.2
Gorai.004G173300 Gossypium raimondii HOM05D003920 ORTHO05D004877 5.0e-130 468.4 357 67.8
DCAR_022405 Daucus carota HOM05D003920 ORTHO05D004877 6.5e-130 468.0 359 66.6
Sc10g0000010 Simmondsia chinensis HOM05D003920 ORTHO05D004877 4.2e-129 465.3 359 68.0
CDE04G0006 Ceratophyllum demersum HOM05D003920 ORTHO05D004877 2.1e-128 463.0 358 64.2
Aa31LG10G17420 Aethionema arabicum HOM05D003920 ORTHO05D004877 6.1e-128 461.5 431 57.5
vmacro13655 Vaccinium macrocarpon HOM05D003920 ORTHO05D004877 6.1e-128 461.5 422 59.5
BcaC07g37767 Brassica carinata HOM05D003920 ORTHO05D004877 7.9e-128 461.1 356 67.4
Nitab4.5_0011837g0010 Nicotiana tabacum HOM05D003920 ORTHO05D004877 7.9e-128 461.1 372 62.9
BraA08t33064Z Brassica rapa HOM05D003920 ORTHO05D004877 1.4e-127 460.3 357 66.7
Lj9C630T11 Lonicera japonica HOM05D003920 ORTHO05D004877 2.3e-127 459.5 353 62.6
Nitab4.5_0000634g0100 Nicotiana tabacum HOM05D003920 ORTHO05D004877 2.3e-127 459.5 345 64.6
COL.COLO4_23923 Corchorus olitorius HOM05D003920 ORTHO05D004877 3.9e-127 458.8 351 61.8
ATR0605G260 Amborella trichopoda HOM05D003920 ORTHO05D004877 6.7e-127 458.0 353 68.0
Thecc.01G412100 Theobroma cacao HOM05D003920 ORTHO05D004877 2.6e-126 456.1 327 70.9
RcHm_v2.0_Chr1g0315781 Rosa chinensis HOM05D003920 ORTHO05D004877 5.7e-126 454.9 328 71.0
Haze_03212 Corylus avellana HOM05D003920 ORTHO05D004877 7.4e-126 454.5 322 72.7
FAN01G3017 Fragaria x ananassa HOM05D003920 ORTHO05D004877 7.4e-126 454.5 328 71.0
FAN03G2194 Fragaria x ananassa HOM05D003920 ORTHO05D004877 9.7e-126 454.1 328 71.0
A08p28590 Brassica napus HOM05D003920 ORTHO05D004877 3.7e-125 452.2 350 66.9
Ciclev10031666m.g Citrus clementina HOM05D003920 ORTHO05D004877 4.8e-125 451.8 321 66.4
Sopen01g034110 Solanum pennellii HOM05D003920 ORTHO05D004877 3.1e-124 449.1 361 62.3
THA.LOC104827426 Tarenaya hassleriana HOM05D003920 ORTHO05D004877 4.1e-124 448.7 354 65.3
SalBow5G4770 Salvia bowleyana HOM05D003920 ORTHO05D004877 5.3e-124 448.4 352 66.5
Solyc01g087030.3 Solanum lycopersicum HOM05D003920 ORTHO05D004877 5.3e-124 448.4 361 62.9
MSTRG.5016 Avicennia marina HOM05D003920 ORTHO05D004877 1.5e-123 446.8 349 66.5
THA.LOC104819067 Tarenaya hassleriana HOM05D003920 ORTHO05D004877 1.5e-123 446.8 357 63.3
MBI04_g13623_MAGBIO Magnolia biondii HOM05D003920 ORTHO05D004877 2.6e-123 446.0 351 65.2
SGA_v2.0_scaffold167G38446 Striga asiatica HOM05D003920 ORTHO05D004877 2.6e-123 446.0 358 64.5
unitig_85.g27216 Utricularia gibba HOM05D003920 ORTHO05D004877 2.6e-123 446.0 357 60.8
HPP92_005768 Vanilla planifolia HOM05D003920 ORTHO05D004877 7.7e-123 444.5 370 63.2
AUR62009376 Chenopodium quinoa HOM05D003920 ORTHO05D004877 1.7e-122 443.4 336 66.4
Atru.chr11.2647 Acer truncatum HOM05D003920 ORTHO05D004877 5.0e-122 441.8 325 69.5
TAR633G1074 Trochodendron aralioides HOM05D003920 ORTHO05D004877 4.2e-121 438.7 352 58.8
EL10Ac2g04315 Beta vulgaris HOM05D003920 ORTHO05D004877 2.7e-120 436.0 343 66.2
Zm00001eb381600 Zea mays HOM05D003920 ORTHO05D004877 6.1e-120 434.9 368 62.5
AT3G08505 Arabidopsis thaliana HOM05D003920 ORTHO05D004877 1.0e-119 434.1 356 63.5
Thhalv10021103m.g Eutrema salsugineum HOM05D003920 ORTHO05D004877 2.3e-119 433.0 356 65.2
Sp3g06990 Schrenkiella parvula HOM05D003920 ORTHO05D004877 3.9e-119 432.2 356 64.9
Thhalv10023829m.g Eutrema salsugineum HOM05D003920 ORTHO05D004877 1.3e-117 427.2 362 62.2
AL3G19480 Arabidopsis lyrata HOM05D003920 ORTHO05D004877 2.8e-117 426.0 356 63.2
Lsat_1_v5_gn_1_107981 Lactuca sativa HOM05D003920 ORTHO05D004877 8.2e-117 424.5 313 70.3
AL5G46410 Arabidopsis lyrata HOM05D003920 ORTHO05D004877 1.6e-115 420.2 325 67.7
Carub.0003s0765 Capsella rubella HOM05D003920 ORTHO05D004877 1.6e-115 420.2 355 63.1
Carub.0005s3016 Capsella rubella HOM05D003920 ORTHO05D004877 7.7e-115 417.9 322 66.8
Cc02_g27790 Coffea canephora HOM05D003920 ORTHO05D004877 3.8e-114 415.6 335 64.5
SEGI_34678 Sequoiadendron giganteum HOM05D003920 ORTHO05D004877 8.5e-114 414.5 353 60.9
BcaC09g47976 Brassica carinata HOM05D003920 ORTHO05D004877 4.7e-112 408.7 356 59.0
BolC8t48154H Brassica oleracea HOM05D003920 ORTHO05D004877 3.0e-111 406.0 322 66.1
BolC8t49780H Brassica oleracea HOM05D003920 ORTHO05D004877 3.0e-111 406.0 322 65.5
CsaV3_7G031170 Cucumis sativus L. HOM05D003920 ORTHO05D004877 6.7e-111 404.8 323 65.0
A08p10660 Brassica napus HOM05D003920 ORTHO05D004877 1.2e-110 404.1 322 66.1
CARHR082810 Cardamine hirsuta HOM05D003920 ORTHO05D004877 2.0e-110 403.3 356 58.4
BraA01t04343Z Brassica rapa HOM05D003920 ORTHO05D004877 3.3e-110 402.5 353 60.1
BcaB03g11569 Brassica carinata HOM05D003920 ORTHO05D004877 4.4e-110 402.1 357 59.7
MELO3C023541.2 Cucumis melo HOM05D003920 ORTHO05D004877 1.3e-109 400.6 323 64.7
BraA03t12740Z Brassica rapa HOM05D003920 ORTHO05D004877 3.7e-109 399.1 354 59.9
BcaB04g21254 Brassica carinata HOM05D003920 ORTHO05D004877 1.4e-108 397.1 356 60.1
A03p35650 Brassica napus HOM05D003920 ORTHO05D004877 7.7e-107 391.3 342 60.2
BolC3t16599H Brassica oleracea HOM05D003920 ORTHO05D004877 1.0e-106 391.0 354 59.6
Gohir.D08G166100 Gossypium hirsutum HOM05D003920 ORTHO05D004877 2.2e-106 389.8 239 73.2
Manes.07G005000 Manihot esculenta HOM05D003920 ORTHO05D004877 2.2e-106 389.8 299 69.6
Hund03665 Selenicereus undatus HOM05D003920 ORTHO05D004877 2.5e-105 386.3 295 68.5
MSTRG.20593 Avicennia marina HOM05D003920 ORTHO05D004877 7.2e-105 384.8 363 58.1
BcaC01g04265 Brassica carinata HOM05D003920 ORTHO05D004877 2.1e-104 383.3 345 59.7
C03p43290 Brassica napus HOM05D003920 ORTHO05D004877 3.6e-104 382.5 342 59.9
Nitab4.5_0004786g0010 Nicotiana tabacum HOM05D003920 ORTHO05D004877 1.5e-102 377.1 347 61.1
Pp3c5_25680 Physcomitrium patens HOM05D003920 ORTHO05D004877 7.5e-102 374.8 348 51.4
Aa31LG5G18640 Aethionema arabicum HOM05D003920 ORTHO05D004877 1.9e-97 360.1 234 70.5
Actinidia24671 Actinidia chinensis HOM05D003920 ORTHO05D004877 5.5e-97 358.6 282 61.7
AUR62023057 Chenopodium quinoa HOM05D003920 ORTHO05D004877 1.6e-96 357.1 293 63.8
Mapoly0042s0020 Marchantia polymorpha HOM05D003920 ORTHO05D004877 3.6e-96 355.9 413 47.7
TWI53G1741 Tripterygium wilfordii HOM05D003920 ORTHO05D004877 2.3e-95 353.2 271 62.0
ClCG09G004250 Citrullus lanatus HOM05D003920 ORTHO05D004877 4.4e-94 349.0 273 61.2
vmacro08182 Vaccinium macrocarpon HOM05D003920 ORTHO05D004877 5.7e-94 348.6 296 63.5
C08p21410 Brassica napus HOM05D003920 ORTHO05D004877 9.8e-94 347.8 217 71.4
Sp5g00030 Schrenkiella parvula HOM05D003920 ORTHO05D004877 9.8e-94 347.8 356 55.3
Gohir.A08G145200 Gossypium hirsutum HOM05D003920 ORTHO05D004877 1.3e-93 347.4 285 66.3
Nitab4.5_0001299g0010 Nicotiana tabacum HOM05D003920 ORTHO05D004877 1.7e-93 347.1 336 54.5
SMO203G0245 Selaginella moellendorffii HOM05D003920 ORTHO05D004877 4.9e-93 345.5 344 54.1
SGA_v2.0_scaffold24G10678 Striga asiatica HOM05D003920 ORTHO05D004877 5.9e-91 338.6 356 52.5
BcaC07g39147 Brassica carinata HOM05D003920 ORTHO05D004877 2.9e-90 336.3 329 52.6
PGR044G2672 Punica granatum HOM05D003920 ORTHO05D004877 3.3e-89 332.8 340 53.5
Actinidia31057 Actinidia chinensis HOM05D003920 ORTHO05D004877 2.1e-88 330.1 361 53.5
Lj7A569G59 Lonicera japonica HOM05D003920 ORTHO05D004877 1.8e-87 327.0 190 73.2
Zm00001eb252860 Zea mays HOM05D003920 ORTHO05D004877 1.8e-87 327.0 327 49.2
Potri.004G134400 Populus trichocarpa HOM05D003920 ORTHO05D004877 2.0e-83 313.5 325 54.2
Peaxi162Scf00148g00610 Petunia axillaris HOM05D003920 ORTHO05D004877 1.3e-82 310.8 325 49.8
Lalb_Chr20g0108061 Lupinus albus HOM05D003920 ORTHO05D004877 1.9e-81 307.0 326 54.6
arahy.Tifrunner.gnm1.ann1.3CZ6TN Arachis hypogaea HOM05D003920 ORTHO05D004877 3.3e-81 306.2 331 55.9
Lj3g0002246 Lotus japonicus HOM05D003920 ORTHO05D004877 3.3e-81 306.2 330 53.0
Actinidia36714 Actinidia chinensis HOM05D003920 ORTHO05D004877 9.5e-81 304.7 357 45.4
arahy.Tifrunner.gnm1.ann1.NHZH5I Arachis hypogaea HOM05D003920 ORTHO05D004877 6.2e-80 302.0 328 56.1
Lalb_Chr01g0015331 Lupinus albus HOM05D003920 ORTHO05D004877 6.8e-79 298.5 327 53.8
Glyma.15G273000 Glycine max HOM05D003920 ORTHO05D004877 1.5e-78 297.4 329 55.3
VMungo1080G1751 Vigna mungo HOM05D003920 ORTHO05D004877 4.4e-78 295.8 331 53.8
Sabra04G0083700 Salix brachista HOM05D003920 ORTHO05D004877 9.2e-76 288.1 195 64.6
TPR.G12281 Trifolium pratense HOM05D003920 ORTHO05D004877 2.1e-75 287.0 325 50.8
Glyma.08G154100 Glycine max HOM05D003920 ORTHO05D004877 3.5e-75 286.2 330 54.5
Ca_14370_v3 Cicer arietinum L. HOM05D003920 ORTHO05D004877 6.0e-75 285.4 329 50.2
AagrBONN_evm.TU.Sc2ySwM_344.3645 Anthoceros agrestis HOM05D003920 ORTHO05D004877 1.0e-74 284.6 324 50.3
Phvul.005G020000 Phaseolus vulgaris HOM05D003920 ORTHO05D004877 3.6e-72 276.2 330 51.8
Medtr3g028170 Medicago truncatula HOM05D003920 ORTHO05D004877 4.7e-72 275.8 329 51.4
Psat5g204240 Pisum sativum HOM05D003920 ORTHO05D004877 5.8e-70 268.9 339 49.3
Nitab4.5_0000254g0170 Nicotiana tabacum HOM05D003920 ORTHO05D004877 1.4e-63 247.7 191 60.2
Cre06.g278136 Chlamydomonas reinhardtii HOM05D003920 ORTHO05D004877 1.5e-62 244.2 218 48.6
arahy.Tifrunner.gnm1.ann1.HIY6S0 Arachis hypogaea HOM05D003920 ORTHO05D004877 1.2e-59 234.6 361 44.3
arahy.Tifrunner.gnm1.ann1.YQ2HRW Arachis hypogaea HOM05D003920 ORTHO05D004877 3.0e-58 229.9 365 44.4
PRCOL_00005356 Prasinoderma coloniale HOM05D003920 ORTHO05D004877 3.6e-56 223.0 369 39.6
unitig_26.g8826 Utricularia gibba HOM05D003920 ORTHO05D004877 2.9e-53 213.4 316 44.0
Nitab4.5_0003190g0010 Nicotiana tabacum HOM05D003920 ORTHO05D004877 8.7e-50 201.8 168 56.5
GSVIVG01032073001 Vitis vinifera HOM05D003920 ORTHO05D004877 2.1e-48 197.2 108 78.7
Oeu039134.1 Olea europaea HOM05D003920 ORTHO05D004877 5.3e-47 192.6 108 77.8
Phvul.011G110100 Phaseolus vulgaris HOM05D003920 ORTHO05D004877 1.7e-45 187.6 93 89.2
TPR.G31394 Trifolium pratense HOM05D002628 ORTHO05D002785 2.0e-17 94.4 102 42.2
QL04p005704 Quercus lobata HOM05D003920 ORTHO05D004877 1.2e-14 85.1 91 58.2
QL04p032014 Quercus lobata HOM05D003920 ORTHO05D004877 1.4e-12 78.2 38 81.6
QL04p032319 Quercus lobata HOM05D003920 ORTHO05D004877 1.9e-12 77.8 48 68.8
Cc02_g27780 Coffea canephora HOM05D003920 ORTHO05D017698 3.0e-10 70.5 41 75.6
BolC8t49779H Brassica oleracea HOM05D003920 ORTHO05D017698 3.9e-10 70.1 40 77.5
BraA08t34788Z Brassica rapa HOM05D003920 ORTHO05D017698 3.9e-10 70.1 40 77.5
MBI17_g06171_MAGBIO Magnolia biondii HOM05D003920 ORTHO05D017698 3.9e-10 70.1 82 48.8
BolC8t48153H Brassica oleracea HOM05D003920 ORTHO05D017698 3.3e-09 67.0 44 68.2
C08p21400 Brassica napus HOM05D003920 ORTHO05D017698 4.1e-07 60.1 50 60.0
QL05p013448 Quercus lobata HOM05D001342 ORTHO05D017698 5.3e-07 59.7 44 63.6
arahy.Tifrunner.gnm1.ann1.RPY2B8 Arachis hypogaea HOM05D004014 ORTHO05D031593 9.1e-07 58.9 32 81.2


User provided reference genes

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