Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_27018_v3 Cicer arietinum L. HOM05D007435 ORTHO05D009338 2.9e-42 174.9 93 100.0
Medtr3g023160 Medicago truncatula HOM05D007435 ORTHO05D009338 1.9e-28 129.0 90 77.8
Psat5g213320 Pisum sativum HOM05D007435 ORTHO05D009338 5.4e-28 127.5 90 73.3
Lj3g0014273 Lotus japonicus HOM05D007435 ORTHO05D009338 2.7e-19 98.6 90 60.0
Glyma.11G149600 Glycine max HOM05D007435 ORTHO05D009338 2.6e-14 82.0 92 56.5
VMungo1080G0635 Vigna mungo HOM05D007435 ORTHO05D009338 5.8e-14 80.9 91 53.8
Lalb_Chr25g0282731 Lupinus albus HOM05D007435 ORTHO05D009338 7.6e-14 80.5 97 52.6
Phvul.005G033400 Phaseolus vulgaris HOM05D007435 ORTHO05D009338 1.3e-13 79.7 91 53.8
TWI63G0886 Tripterygium wilfordii HOM05D007435 ORTHO05D009338 6.4e-13 77.4 91 54.9
Hma1.2p1_0269F.1_g107800 Hydrangea macrophylla HOM05D007435 ORTHO05D009338 9.3e-12 73.6 81 55.6
Thecc.10G004500 Theobroma cacao HOM05D007435 ORTHO05D009338 1.2e-11 73.2 52 65.4
QL04p012434 Quercus lobata HOM05D007435 ORTHO05D009338 1.6e-11 72.8 92 47.8
QL04p013057 Quercus lobata HOM05D007435 ORTHO05D009338 2.7e-11 72.0 93 49.5
CiPaw.13G009600 Carya illinoinensis HOM05D007435 ORTHO05D009338 4.6e-11 71.2 87 46.0
COL.COLO4_19345 Corchorus olitorius HOM05D007435 ORTHO05D009338 4.6e-11 71.2 99 48.5
Prupe.2G027100 Prunus persica HOM05D007435 ORTHO05D009338 7.8e-11 70.5 88 48.9
FvH4_7g02100 Fragaria vesca HOM05D007435 ORTHO05D009338 1.3e-10 69.7 101 49.5
Actinidia21528 Actinidia chinensis HOM05D007435 ORTHO05D009338 1.7e-10 69.3 52 63.5
Cfa010840 Carpinus fangiana HOM05D007435 ORTHO05D009338 1.7e-10 69.3 80 50.0
FAN03G1772 Fragaria x ananassa HOM05D007435 ORTHO05D009338 2.3e-10 68.9 100 49.0
Cpa.g.sc197.17 Carica papaya HOM05D007435 ORTHO05D009338 3.9e-10 68.2 99 46.5
Haze_03106 Corylus avellana HOM05D007435 ORTHO05D009338 3.9e-10 68.2 83 48.2
Duzib128G0703 Durio zibethinus HOM05D007435 ORTHO05D009338 3.9e-10 68.2 50 64.0
Manes.11G002100 Manihot esculenta HOM05D007435 ORTHO05D009338 5.1e-10 67.8 91 46.2
vmacro19756 Vaccinium macrocarpon HOM05D007435 ORTHO05D009338 5.1e-10 67.8 96 50.0
CSS0019859 Camellia sinensis var. sinensis HOM05D007435 ORTHO05D009338 6.6e-10 67.4 81 49.4
MD07G1027000 Malus domestica HOM05D007435 ORTHO05D009338 8.7e-10 67.0 79 48.1
THA.LOC104826709 Tarenaya hassleriana HOM05D007435 ORTHO05D009338 1.1e-09 66.6 93 46.2
AT4G31560 Arabidopsis thaliana HOM05D007435 ORTHO05D009338 1.5e-09 66.2 98 43.9
Carub.0007s0901 Capsella rubella HOM05D007435 ORTHO05D009338 1.9e-09 65.9 96 44.8
Hund13323 Selenicereus undatus HOM05D000185 ORTHO05D000105 1.9e-09 65.9 51 66.7
Actinidia02252 Actinidia chinensis HOM05D007435 ORTHO05D009338 2.5e-09 65.5 84 47.6
CARHR239440 Cardamine hirsuta HOM05D007435 ORTHO05D009338 2.5e-09 65.5 89 43.8
Duzib114G0226 Durio zibethinus HOM05D007435 ORTHO05D009338 2.5e-09 65.5 97 44.3
Sabra01G0016900 Salix brachista HOM05D007435 ORTHO05D009338 2.5e-09 65.5 53 62.3
TAR369G0027 Trochodendron aralioides HOM05D007435 ORTHO05D009338 2.5e-09 65.5 92 52.2
SGA_v2.0_scaffold354G49740 Striga asiatica HOM05D007435 ORTHO05D009338 3.3e-09 65.1 74 51.4
AUR62026808 Chenopodium quinoa HOM05D007435 ORTHO05D009338 4.3e-09 64.7 52 61.5
Nitab4.5_0001775g0080 Nicotiana tabacum HOM05D007435 ORTHO05D009338 4.3e-09 64.7 90 44.4
TAR065G0004 Trochodendron aralioides HOM05D007435 ORTHO05D009338 4.3e-09 64.7 87 47.1
Dinv03572 Davidia involucrata HOM05D007435 ORTHO05D009338 5.6e-09 64.3 64 54.7
Dinv05039 Davidia involucrata HOM05D007435 ORTHO05D009338 5.6e-09 64.3 64 54.7
MD02G1297000 Malus domestica HOM05D007435 ORTHO05D009338 5.6e-09 64.3 79 46.8
RcHm_v2.0_Chr1g0319401 Rosa chinensis HOM05D007435 ORTHO05D009338 5.6e-09 64.3 67 55.2
ClCG01G007560 Citrullus lanatus HOM05D007435 ORTHO05D009338 7.3e-09 63.9 81 50.6
Dinv32059 Davidia involucrata HOM05D007435 ORTHO05D009338 7.3e-09 63.9 70 50.0
Gohir.A10G239300 Gossypium hirsutum HOM05D007435 ORTHO05D009338 7.3e-09 63.9 45 64.4
Gohir.D10G251200 Gossypium hirsutum HOM05D007435 ORTHO05D009338 7.3e-09 63.9 45 64.4
Gorai.011G291600 Gossypium raimondii HOM05D007435 ORTHO05D009338 7.3e-09 63.9 45 64.4
Rhsim05G0126700 Rhododendron simsii HOM05D007435 ORTHO05D009338 7.3e-09 63.9 97 44.3
unitig_578.g16053 Utricularia gibba HOM05D007435 ORTHO05D009338 7.3e-09 63.9 55 60.0
C07p58750 Brassica napus HOM05D007435 ORTHO05D009338 1.3e-08 63.2 96 41.7
BolC7t46323H Brassica oleracea HOM05D007435 ORTHO05D009338 1.3e-08 63.2 96 41.7
CANSAT80G0490 Cannabis sativa HOM05D007435 ORTHO05D009338 1.3e-08 63.2 108 46.3
CsaV3_5G024570 Cucumis sativus L. HOM05D007435 ORTHO05D009338 1.3e-08 63.2 83 48.2
Lsat_1_v5_gn_1_100400 Lactuca sativa HOM05D007435 ORTHO05D009338 1.3e-08 63.2 55 58.2
Potri.001G022500 Populus trichocarpa HOM05D007435 ORTHO05D009338 1.3e-08 63.2 91 44.0
HanXRQChr01g0020861 Helianthus annuus HOM05D007435 ORTHO05D009338 1.6e-08 62.8 63 55.6
Sc10g0004150 Simmondsia chinensis HOM05D007435 ORTHO05D009338 1.6e-08 62.8 86 45.3
Eucgr.G03266 Eucalyptus grandis HOM05D007435 ORTHO05D009338 2.1e-08 62.4 83 45.8
AL343U10010 Arabidopsis lyrata HOM05D007435 ORTHO05D009338 2.8e-08 62.0 99 45.5
AUR62037244 Chenopodium quinoa HOM05D007435 ORTHO05D009338 2.8e-08 62.0 52 57.7
MELO3C005141.2 Cucumis melo HOM05D007435 ORTHO05D009338 3.6e-08 61.6 95 48.4
Migut.N01821 Erythranthe guttata HOM05D007435 ORTHO05D009338 3.6e-08 61.6 60 53.3
Sp7g29390 Schrenkiella parvula HOM05D007435 ORTHO05D009338 6.2e-08 60.8 95 44.2
arahy.Tifrunner.gnm1.ann1.4Y0UDN Arachis hypogaea HOM05D007435 ORTHO05D009338 8.1e-08 60.5 91 49.5
ECA248G3437 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.1e-08 60.5 58 53.4
SalBow6G1324 Salvia bowleyana HOM05D007435 ORTHO05D009338 8.1e-08 60.5 71 49.3
Ciclev10032994m.g Citrus clementina HOM05D007435 ORTHO05D009338 1.1e-07 60.1 46 63.0
Aa31LG2G18760 Aethionema arabicum HOM05D007435 ORTHO05D009338 1.4e-07 59.7 102 42.2
BcaNung04129 Brassica carinata HOM05D007435 ORTHO05D009338 1.8e-07 59.3 96 40.6
Nn7g36439 Nelumbo nucifera HOM05D007435 ORTHO05D009338 1.8e-07 59.3 49 63.3
Thhalv10026511m.g Eutrema salsugineum HOM05D007435 ORTHO05D009338 2.4e-07 58.9 103 39.8
Ah.10g030920 Amaranthus hybridus HOM05D007435 ORTHO05D009338 3.1e-07 58.5 53 60.4
A01p06670 Brassica napus HOM05D005366 ORTHO05D006323 3.1e-07 58.5 89 42.7
BraA01t00625Z Brassica rapa HOM05D005366 ORTHO05D006323 3.1e-07 58.5 89 42.7
arahy.Tifrunner.gnm1.ann1.KRJM02 Arachis hypogaea HOM05D007435 ORTHO05D009338 4.0e-07 58.2 91 48.4
A03p60860 Brassica napus HOM05D007435 ORTHO05D009338 5.3e-07 57.8 91 39.6
BraA03t15122Z Brassica rapa HOM05D007435 ORTHO05D009338 5.3e-07 57.8 91 39.6
Sed0015818 Sechium edule HOM05D007435 ORTHO05D009338 9.0e-07 57.0 87 47.1
Glyma.04G142000 Glycine max HOM05D007435 ORTHO05D009338 1.2e-06 56.6 89 46.1
Nitab4.5_0000316g0230 Nicotiana tabacum HOM05D002000 ORTHO05D002027 1.2e-06 56.6 92 45.7
BcaNung01514 Brassica carinata HOM05D007435 ORTHO05D009338 1.5e-06 56.2 91 39.6
DCAR_009211 Daucus carota HOM05D007435 ORTHO05D009338 1.5e-06 56.2 86 40.7
Solyc01g068190.3 Solanum lycopersicum HOM05D007435 ORTHO05D009338 1.5e-06 56.2 65 46.2
Sopen01g030130 Solanum pennellii HOM05D007435 ORTHO05D009338 1.5e-06 56.2 65 46.2
PGSC0003DMG401006753 Solanum tuberosum HOM05D007435 ORTHO05D009338 1.5e-06 56.2 53 52.8
BcaC09g51937 Brassica carinata HOM05D007435 ORTHO05D009338 4.4e-06 54.7 92 39.1
C01p07440 Brassica napus HOM05D007435 ORTHO05D009338 4.4e-06 54.7 92 39.1
BolC1t00726H Brassica oleracea HOM05D007435 ORTHO05D009338 4.4e-06 54.7 92 39.1
Haze_19805 Corylus avellana HOM05D007435 ORTHO05D009338 4.4e-06 54.7 93 44.1
Atru.chr11.2511 Acer truncatum HOM05D007435 ORTHO05D009338 7.6e-06 53.9 88 42.0
PSO339G5565 Papaver somniferum HOM05D007435 ORTHO05D009338 7.6e-06 53.9 49 49.0


User provided reference genes

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