Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_26970_v3 Cicer arietinum L. HOM05D003443 ORTHO05D008640 2.4e-72 275.4 141 100.0
Psat2g087720 Pisum sativum HOM05D003443 ORTHO05D008640 8.1e-52 207.2 144 81.2
Medtr5g058660 Medicago truncatula HOM05D003443 ORTHO05D008640 5.3e-51 204.5 141 80.9
Medtr5g059030 Medicago truncatula HOM05D003443 ORTHO05D008640 5.3e-51 204.5 141 80.9
Glyma.14G162600 Glycine max HOM05D003443 ORTHO05D008640 8.1e-44 180.6 146 70.5
VMungo0647G0179 Vigna mungo HOM05D003443 ORTHO05D008640 1.4e-43 179.9 142 73.2
Lj1g0013808 Lotus japonicus HOM05D003443 ORTHO05D008640 4.0e-43 178.3 144 68.8
Lalb_Chr10g0101911 Lupinus albus HOM05D003443 ORTHO05D008640 4.5e-42 174.9 136 71.3
CiPaw.05G224500 Carya illinoinensis HOM05D003443 ORTHO05D008640 8.7e-38 160.6 132 68.2
Dinv40389 Davidia involucrata HOM05D003443 ORTHO05D008640 1.9e-37 159.5 137 67.2
Cfa015987 Carpinus fangiana HOM05D003443 ORTHO05D009887 1.6e-36 156.4 131 66.4
arahy.Tifrunner.gnm1.ann1.ZIXY5S Arachis hypogaea HOM05D003443 ORTHO05D008640 6.3e-36 154.5 143 62.2
arahy.Tifrunner.gnm1.ann1.B00VWE Arachis hypogaea HOM05D003443 ORTHO05D008640 1.8e-35 152.9 143 62.2
Cpa.g.sc70.11 Carica papaya HOM05D003443 ORTHO05D008640 2.4e-35 152.5 132 65.2
Actinidia23064 Actinidia chinensis HOM05D003443 ORTHO05D008640 5.3e-35 151.4 131 64.9
Manes.18G075200 Manihot esculenta HOM05D003443 ORTHO05D008640 5.3e-35 151.4 137 64.2
Haze_00480 Corylus avellana HOM05D003443 ORTHO05D008640 1.2e-34 150.2 130 63.8
Sabra02G0067600 Salix brachista HOM05D003443 ORTHO05D008640 1.5e-34 149.8 132 63.6
QL08p024382 Quercus lobata HOM05D003443 ORTHO05D008640 2.6e-34 149.1 131 65.6
Atru.chr13.1408 Acer truncatum HOM05D003443 ORTHO05D008640 5.9e-34 147.9 132 65.9
GSVIVG01008902001 Vitis vinifera HOM05D003443 ORTHO05D008640 7.6e-34 147.5 131 61.8
CSS0034050 Camellia sinensis var. sinensis HOM05D003443 ORTHO05D008640 1.0e-33 147.1 138 61.6
Thecc.08G121300 Theobroma cacao HOM05D003443 ORTHO05D008640 1.0e-33 147.1 133 63.2
Prupe.1G501600 Prunus persica HOM05D003443 ORTHO05D008640 3.8e-33 145.2 129 62.8
Ciclev10002759m.g Citrus clementina HOM05D003443 ORTHO05D008640 6.5e-33 144.4 131 64.1
vmacro12548 Vaccinium macrocarpon HOM05D003443 ORTHO05D008640 1.1e-32 143.7 141 61.7
AL6G41970 Arabidopsis lyrata HOM05D003443 ORTHO05D008640 1.9e-32 142.9 129 60.5
DCAR_014106 Daucus carota HOM05D003443 ORTHO05D008640 1.9e-32 142.9 134 61.2
FAN24G2127 Fragaria x ananassa HOM05D003443 ORTHO05D008640 2.5e-32 142.5 131 58.8
Potri.002G086200 Populus trichocarpa HOM05D003443 ORTHO05D008640 2.5e-32 142.5 134 60.4
FvH4_2g26530 Fragaria vesca HOM05D003443 ORTHO05D008640 3.2e-32 142.1 131 58.8
Nn4g26023 Nelumbo nucifera HOM05D003443 ORTHO05D008640 3.2e-32 142.1 131 61.1
MD15G1353300 Malus domestica HOM05D003443 ORTHO05D008640 7.2e-32 141.0 129 60.5
MD03G1200300 Malus domestica HOM05D003443 ORTHO05D008640 9.3e-32 140.6 129 60.5
Nitab4.5_0002883g0010 Nicotiana tabacum HOM05D003443 ORTHO05D008640 9.3e-32 140.6 133 60.2
RcHm_v2.0_Chr6g0295401 Rosa chinensis HOM05D003443 ORTHO05D008640 3.6e-31 138.7 131 58.0
Hma1.2p1_0073F.1_g038390 Hydrangea macrophylla HOM05D003443 ORTHO05D008640 4.6e-31 138.3 129 60.5
THA.LOC104817138 Tarenaya hassleriana HOM05D003443 ORTHO05D008640 6.1e-31 137.9 131 56.5
Rhsim06G0105400 Rhododendron simsii HOM05D003443 ORTHO05D008640 7.9e-31 137.5 138 60.1
Gohir.A05G233400 Gossypium hirsutum HOM05D003443 ORTHO05D008640 1.0e-30 137.1 132 59.8
Actinidia02607 Actinidia chinensis HOM05D003443 ORTHO05D008640 1.3e-30 136.7 135 57.8
AT4G08240 Arabidopsis thaliana HOM05D003443 ORTHO05D008640 1.8e-30 136.3 129 59.7
Gorai.009G244100 Gossypium raimondii HOM05D003443 ORTHO05D008640 2.3e-30 136.0 132 59.8
PGSC0003DMG400000906 Solanum tuberosum HOM05D003443 ORTHO05D008640 3.0e-30 135.6 133 59.4
AUR62004720 Chenopodium quinoa HOM05D003443 ORTHO05D008640 5.1e-30 134.8 131 56.5
Solyc11g013020.2 Solanum lycopersicum HOM05D003443 ORTHO05D008640 5.1e-30 134.8 133 57.9
Carub.0006s2677 Capsella rubella HOM05D003443 ORTHO05D008640 6.7e-30 134.4 130 56.9
Gohir.D05G235800 Gossypium hirsutum HOM05D003443 ORTHO05D008640 6.7e-30 134.4 132 59.1
FAN15G0021 Fragaria x ananassa HOM05D003443 ORTHO05D008640 8.7e-30 134.0 131 57.3
Sopen11g007760 Solanum pennellii HOM05D003443 ORTHO05D008640 8.7e-30 134.0 133 57.9
Sc01g0001350 Simmondsia chinensis HOM05D003443 ORTHO05D008640 1.1e-29 133.7 129 57.4
Nitab4.5_0001926g0050 Nicotiana tabacum HOM05D003443 ORTHO05D008640 1.5e-29 133.3 133 57.1
MBI06_g44272_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D008640 3.3e-29 132.1 126 59.5
MBI15_g35999_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D008640 3.3e-29 132.1 126 59.5
TPR.G8499 Trifolium pratense HOM05D028375 ORTHO05D008640 3.3e-29 132.1 128 61.7
FAN27G2419 Fragaria x ananassa HOM05D003443 ORTHO05D008640 7.4e-29 131.0 127 59.1
Aa31LG9G14320 Aethionema arabicum HOM05D003443 ORTHO05D008640 9.7e-29 130.6 141 52.5
CsaV3_6G003590 Cucumis sativus L. HOM05D003443 ORTHO05D008640 9.7e-29 130.6 148 53.4
Peaxi162Scf00198g00098 Petunia axillaris HOM05D003443 ORTHO05D008640 9.7e-29 130.6 132 57.6
Sp6g09810 Schrenkiella parvula HOM05D003443 ORTHO05D008640 1.6e-28 129.8 129 58.1
CARHR259340 Cardamine hirsuta HOM05D003443 ORTHO05D008640 2.2e-28 129.4 129 55.8
CANSAT25G1680 Cannabis sativa HOM05D003443 ORTHO05D008640 2.8e-28 129.0 127 59.1
CAN.G513.1 Capsicum annuum HOM05D003443 ORTHO05D008640 2.8e-28 129.0 128 57.8
Peaxi162Scf00395g00717 Petunia axillaris HOM05D003443 ORTHO05D008640 2.8e-28 129.0 127 59.1
BcaB01g02870 Brassica carinata HOM05D003443 ORTHO05D008640 1.8e-27 126.3 130 56.2
MELO3C011587.2 Cucumis melo HOM05D003443 ORTHO05D008640 1.8e-27 126.3 133 56.4
Phvul.008G165400 Phaseolus vulgaris HOM05D003443 ORTHO05D008640 1.8e-27 126.3 135 60.0
Migut.C01148 Erythranthe guttata HOM05D003443 ORTHO05D008640 2.4e-27 125.9 126 56.3
Thhalv10029053m.g Eutrema salsugineum HOM05D003443 ORTHO05D008640 3.1e-27 125.6 130 55.4
SGA_v2.0_scaffold52G18981 Striga asiatica HOM05D003443 ORTHO05D008640 3.1e-27 125.6 132 53.8
PSO170G0931 Papaver somniferum HOM05D003443 ORTHO05D008640 5.3e-27 124.8 126 57.1
SalBow7G2413 Salvia bowleyana HOM05D003443 ORTHO05D008640 9.1e-27 124.0 127 52.8
BraA03t12014Z Brassica rapa HOM05D003443 ORTHO05D008640 4.5e-26 121.7 129 52.7
Cc10_g11000 Coffea canephora HOM05D003443 ORTHO05D008640 4.5e-26 121.7 133 54.1
SalBow7G4791 Salvia bowleyana HOM05D003443 ORTHO05D008640 4.5e-26 121.7 127 53.5
HPP92_002301 Vanilla planifolia HOM05D003443 ORTHO05D008640 4.5e-26 121.7 135 51.9
BcaC01g04776 Brassica carinata HOM05D003443 ORTHO05D008640 5.9e-26 121.3 127 52.8
C03p33840 Brassica napus HOM05D003443 ORTHO05D008640 5.9e-26 121.3 127 52.8
BolC3t15700H Brassica oleracea HOM05D003443 ORTHO05D008640 5.9e-26 121.3 127 52.8
Sed0028054 Sechium edule HOM05D003443 ORTHO05D008640 1.0e-25 120.6 142 50.0
A03p27990 Brassica napus HOM05D003443 ORTHO05D008640 1.7e-25 119.8 129 51.2
Aqoxy6G00163 Aquilegia oxysepala HOM05D003443 ORTHO05D008640 6.5e-25 117.9 128 51.6
MELO3C011304.2 Cucumis melo HOM05D003443 ORTHO05D008640 8.5e-25 117.5 145 51.7
MSTRG.1460 Avicennia marina HOM05D003443 ORTHO05D008640 9.4e-24 114.0 127 52.0
ATR0121G005 Amborella trichopoda HOM05D003443 ORTHO05D008640 2.7e-23 112.5 135 48.1
Hund27039 Selenicereus undatus HOM05D003443 ORTHO05D008640 1.0e-22 110.5 204 39.2
Lsat_1_v5_gn_4_136221 Lactuca sativa HOM05D003443 ORTHO05D008640 2.3e-22 109.4 121 52.1
Os02g0567000 Oryza sativa ssp. japonica HOM05D003443 ORTHO05D008640 1.1e-21 107.1 125 50.4
HanXRQChr09g0254131 Helianthus annuus HOM05D003443 ORTHO05D008640 2.0e-21 106.3 121 51.2
AUR62023639 Chenopodium quinoa HOM05D003443 ORTHO05D008640 2.6e-21 105.9 129 46.5
MD08G1167900 Malus domestica HOM05D003443 ORTHO05D008640 5.7e-21 104.8 133 50.4
ECA232G0443 Erigeron canadensis HOM05D003443 ORTHO05D008640 2.2e-20 102.8 129 44.2
PGR044G0044 Punica granatum HOM05D003443 ORTHO05D008640 4.8e-20 101.7 133 49.6
TAR628G1666 Trochodendron aralioides HOM05D003443 ORTHO05D008640 1.8e-19 99.8 73 68.5
unitig_747.g21488 Utricularia gibba HOM05D003443 ORTHO05D008640 3.1e-19 99.0 128 47.7
SEGI_04119 Sequoiadendron giganteum HOM05D003443 ORTHO05D008640 6.9e-19 97.8 120 46.7
Eucgr.L01689 Eucalyptus grandis HOM05D003443 ORTHO05D008640 1.2e-18 97.1 71 67.6
Ah.16g110170 Amaranthus hybridus HOM05D003443 ORTHO05D008640 2.6e-18 95.9 70 65.7
ClCG08G005410 Citrullus lanatus HOM05D003443 ORTHO05D008640 5.9e-18 94.7 203 35.0
CDE08G0113 Ceratophyllum demersum HOM05D003443 ORTHO05D008640 1.3e-17 93.6 112 46.4
Zm00001eb244530 Zea mays HOM05D003443 ORTHO05D008640 3.8e-17 92.0 123 45.5
Duzib093G0610 Durio zibethinus HOM05D003443 ORTHO05D008640 1.4e-16 90.1 135 48.1
CDE06G0537 Ceratophyllum demersum HOM05D003443 ORTHO05D008640 2.5e-16 89.4 112 45.5
TWI12G0841 Tripterygium wilfordii HOM05D003443 ORTHO05D008640 7.2e-16 87.8 72 61.1
TPR.G109 Trifolium pratense HOM05D003443 ORTHO05D008640 9.4e-16 87.4 51 88.2
Oeu047933.1 Olea europaea HOM05D003443 ORTHO05D008640 2.3e-14 82.8 140 42.1
Migut.G00969 Erythranthe guttata HOM05D003443 ORTHO05D008640 8.8e-14 80.9 126 44.4
Mapoly0161s0025 Marchantia polymorpha HOM05D003443 ORTHO05D008640 7.4e-13 77.8 121 34.7
Cfa009666 Carpinus fangiana HOM05D003443 ORTHO05D008640 1.7e-12 76.6 76 57.9
Cpa.g.sc36.31 Carica papaya HOM05D003443 ORTHO05D008640 1.5e-08 63.5 100 42.0
SHI33895 Sapria himalayana HOM05D003443 ORTHO05D008640 2.7e-07 59.3 129 33.3
Actinidia18153 Actinidia chinensis HOM05D003443 ORTHO05D008640 1.4e-06 57.0 61 59.0


User provided reference genes

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