Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_26803_v3 Cicer arietinum L. HOM05D006127 ORTHO05D007465 3.7e-307 1057.4 531 100.0
Lj2g0027649 Lotus japonicus HOM05D006127 ORTHO05D007465 2.8e-246 855.1 545 79.6
Medtr6g053110 Medicago truncatula HOM05D006127 ORTHO05D007465 8.4e-243 843.6 538 81.8
Glyma.09G129300 Glycine max HOM05D006127 ORTHO05D007465 2.5e-242 842.0 539 80.1
Phvul.004G105900 Phaseolus vulgaris HOM05D006127 ORTHO05D007465 4.6e-241 837.8 542 78.0
Lalb_Chr01g0009501 Lupinus albus HOM05D006127 ORTHO05D007465 5.1e-224 781.2 546 74.9
Glyma.16G177100 Glycine max HOM05D006127 ORTHO05D007465 3.1e-221 771.9 527 75.1
arahy.Tifrunner.gnm1.ann1.AR9FJK Arachis hypogaea HOM05D006127 ORTHO05D007465 2.6e-212 742.3 562 70.8
arahy.Tifrunner.gnm1.ann1.HXNP43 Arachis hypogaea HOM05D006127 ORTHO05D007465 1.1e-210 736.9 555 71.0
Cfa016302 Carpinus fangiana HOM05D006127 ORTHO05D007465 1.1e-194 683.7 547 66.4
Ciclev10004691m.g Citrus clementina HOM05D006127 ORTHO05D007465 4.0e-192 675.2 555 63.6
QL09p012458 Quercus lobata HOM05D006127 ORTHO05D007465 6.3e-190 667.9 550 65.3
Sabra17G0124200 Salix brachista HOM05D006127 ORTHO05D007465 4.1e-189 665.2 566 63.3
COL.COLO4_30292 Corchorus olitorius HOM05D006127 ORTHO05D007465 5.4e-189 664.8 567 63.0
Potri.017G148900 Populus trichocarpa HOM05D006127 ORTHO05D007465 1.6e-188 663.3 562 63.5
Thecc.03G186000 Theobroma cacao HOM05D006127 ORTHO05D007465 2.7e-188 662.5 563 63.6
Gohir.D11G229300 Gossypium hirsutum HOM05D006127 ORTHO05D007465 4.5e-188 661.8 563 63.6
Gorai.003G069400 Gossypium raimondii HOM05D006127 ORTHO05D007465 2.9e-187 659.1 564 63.3
Prupe.2G302400 Prunus persica HOM05D006127 ORTHO05D007465 2.9e-187 659.1 552 63.6
Gohir.A11G225200 Gossypium hirsutum HOM05D006127 ORTHO05D007465 1.5e-186 656.8 564 63.1
MD07G1280200 Malus domestica HOM05D006127 ORTHO05D007465 2.1e-185 652.9 551 62.8
CSS0002355 Camellia sinensis var. sinensis HOM05D006127 ORTHO05D007465 4.7e-185 651.7 563 62.9
Manes.06G153500 Manihot esculenta HOM05D006127 ORTHO05D007465 4.7e-185 651.7 504 66.3
Dinv35267 Davidia involucrata HOM05D006127 ORTHO05D007465 3.0e-184 649.0 560 62.0
Atru.chr1.338 Acer truncatum HOM05D006127 ORTHO05D007465 1.2e-183 647.1 514 65.8
CiPaw.06G004100 Carya illinoinensis HOM05D006127 ORTHO05D007465 2.6e-183 646.0 538 64.7
CSS0021566 Camellia sinensis var. sinensis HOM05D006127 ORTHO05D007465 5.7e-183 644.8 567 62.3
Potri.004G072100 Populus trichocarpa HOM05D006127 ORTHO05D007465 3.2e-181 639.0 504 68.1
Actinidia34165 Actinidia chinensis HOM05D006127 ORTHO05D007465 7.0e-181 637.9 567 61.4
MD01G1210100 Malus domestica HOM05D006127 ORTHO05D007465 2.7e-180 636.0 444 71.4
Nitab4.5_0000472g0230 Nicotiana tabacum HOM05D006127 ORTHO05D007465 7.8e-180 634.4 475 68.4
Psat0s2186g0040 Pisum sativum HOM05D006127 ORTHO05D007465 1.8e-176 623.2 374 85.6
TWI23G0320 Tripterygium wilfordii HOM05D006127 ORTHO05D007465 1.8e-176 623.2 563 59.9
PGSC0003DMG400009503 Solanum tuberosum HOM05D006127 ORTHO05D007465 2.3e-176 622.9 469 67.6
MSTRG.8699 Avicennia marina HOM05D006127 ORTHO05D007465 6.8e-176 621.3 568 58.6
RcHm_v2.0_Chr1g0378611 Rosa chinensis HOM05D006127 ORTHO05D007465 1.2e-175 620.5 521 64.1
CAN.G236.3 Capsicum annuum HOM05D006127 ORTHO05D007465 1.5e-175 620.2 469 67.6
Sabra04G0047500 Salix brachista HOM05D006127 ORTHO05D007465 3.4e-175 619.0 613 57.4
PGR044G2596 Punica granatum HOM05D006127 ORTHO05D007465 5.8e-175 618.2 559 60.6
Solyc03g007620.3 Solanum lycopersicum HOM05D006127 ORTHO05D007465 7.5e-175 617.8 469 67.0
Nitab4.5_0001331g0020 Nicotiana tabacum HOM05D006127 ORTHO05D007465 1.7e-174 616.7 478 66.1
Sopen03g003570 Solanum pennellii HOM05D006127 ORTHO05D007465 1.7e-174 616.7 469 67.0
Peaxi162Scf00444g00314 Petunia axillaris HOM05D006127 ORTHO05D007465 8.3e-174 614.4 467 67.5
Dinv28380 Davidia involucrata HOM05D006127 ORTHO05D007465 3.2e-173 612.5 572 59.8
CiPaw.05G261300 Carya illinoinensis HOM05D006127 ORTHO05D007465 4.6e-172 608.6 432 70.6
THA.LOC104818243 Tarenaya hassleriana HOM05D006127 ORTHO05D007465 6.0e-172 608.2 514 63.4
HanXRQChr00c0486g0575011 Helianthus annuus HOM05D006127 ORTHO05D007465 1.0e-171 607.4 548 58.0
TAR374G0777 Trochodendron aralioides HOM05D006127 ORTHO05D007465 6.6e-171 604.7 470 65.7
Haze_00059 Corylus avellana HOM05D006127 ORTHO05D007465 3.3e-170 602.4 547 60.9
FAN10G2357 Fragaria x ananassa HOM05D006127 ORTHO05D007465 5.6e-170 601.7 483 65.8
FAN03G2078 Fragaria x ananassa HOM05D006127 ORTHO05D007465 1.6e-169 600.1 511 64.0
Eucgr.A02719 Eucalyptus grandis HOM05D006127 ORTHO05D007465 2.1e-169 599.7 562 57.5
FAN06G1782 Fragaria x ananassa HOM05D006127 ORTHO05D007465 2.1e-169 599.7 511 64.4
FAN06G3350 Fragaria x ananassa HOM05D006127 ORTHO05D007465 2.1e-169 599.7 511 64.4
CsaV3_5G001020 Cucumis sativus L. HOM05D006127 ORTHO05D007465 4.7e-169 598.6 560 58.6
FAN10G0315 Fragaria x ananassa HOM05D006127 ORTHO05D007465 4.7e-169 598.6 483 65.6
Thhalv10003967m.g Eutrema salsugineum HOM05D006127 ORTHO05D007465 1.1e-168 597.4 550 58.4
FAN03G3352 Fragaria x ananassa HOM05D006127 ORTHO05D007465 1.4e-168 597.0 511 63.6
Lj1A1007G54 Lonicera japonica HOM05D006127 ORTHO05D007465 1.4e-168 597.0 490 62.7
AT5G62650 Arabidopsis thaliana HOM05D006127 ORTHO05D007465 3.1e-168 595.9 547 58.9
ClCG01G000890 Citrullus lanatus HOM05D006127 ORTHO05D007465 3.1e-168 595.9 558 59.5
MELO3C005842.2 Cucumis melo HOM05D006127 ORTHO05D007465 8.9e-168 594.3 559 58.7
AL8G39630 Arabidopsis lyrata HOM05D006127 ORTHO05D007465 1.5e-167 593.6 547 58.7
Gohir.D09G177600 Gossypium hirsutum HOM05D006127 ORTHO05D007465 5.8e-167 591.7 540 58.9
Gorai.006G199600 Gossypium raimondii HOM05D006127 ORTHO05D007465 5.8e-167 591.7 540 59.6
TPR.G9177 Trifolium pratense HOM05D006127 ORTHO05D007465 2.2e-166 589.7 366 83.1
Carub.0008s2341 Capsella rubella HOM05D006127 ORTHO05D007465 4.9e-166 588.6 538 58.0
Aa31LG11G990 Aethionema arabicum HOM05D006127 ORTHO05D007465 6.4e-166 588.2 552 59.1
Sp2g25830 Schrenkiella parvula HOM05D006127 ORTHO05D007465 1.4e-165 587.0 550 58.0
Cc02_g02250 Coffea canephora HOM05D006127 ORTHO05D007465 1.7e-163 580.1 437 65.9
ECA232G4568 Erigeron canadensis HOM05D006127 ORTHO05D007465 3.9e-163 578.9 466 62.2
PSO266G0017 Papaver somniferum HOM05D006127 ORTHO05D007465 5.1e-163 578.6 468 62.6
Sed0008008 Sechium edule HOM05D006127 ORTHO05D007465 6.6e-163 578.2 559 56.4
A06p29390 Brassica napus HOM05D006127 ORTHO05D007465 1.1e-162 577.4 544 57.2
PSO478G4852 Papaver somniferum HOM05D006127 ORTHO05D007465 1.9e-162 576.6 572 54.7
BraA06t25889Z Brassica rapa HOM05D006127 ORTHO05D007465 3.3e-162 575.9 544 57.0
Migut.F00277 Erythranthe guttata HOM05D006127 ORTHO05D007465 3.3e-162 575.9 520 58.5
CARHR276460 Cardamine hirsuta HOM05D006127 ORTHO05D007465 4.3e-162 575.5 537 57.9
BcaC01g02503 Brassica carinata HOM05D006127 ORTHO05D007465 3.6e-161 572.4 544 56.8
Aqoxy7G00200 Aquilegia oxysepala HOM05D006127 ORTHO05D007465 1.1e-160 570.9 469 63.5
Gohir.A09G182900 Gossypium hirsutum HOM05D006127 ORTHO05D007465 1.1e-160 570.9 522 60.0
BolC3t18667H Brassica oleracea HOM05D006127 ORTHO05D007465 6.8e-160 568.2 543 56.2
C03p64120 Brassica napus HOM05D006127 ORTHO05D007465 1.2e-159 567.4 542 56.3
Sc13g0009280 Simmondsia chinensis HOM05D006127 ORTHO05D007465 5.8e-159 565.1 463 62.2
HanXRQChr15g0494171 Helianthus annuus HOM05D006127 ORTHO05D007465 3.2e-157 559.3 533 56.3
Lsat_1_v5_gn_9_56840 Lactuca sativa HOM05D006127 ORTHO05D007465 3.2e-157 559.3 559 57.2
EL10Ac3g05405 Beta vulgaris HOM05D006127 ORTHO05D007465 4.1e-157 558.9 561 56.1
BcaB02g09667 Brassica carinata HOM05D006127 ORTHO05D007465 1.6e-156 557.0 547 56.5
AUR62031438 Chenopodium quinoa HOM05D006127 ORTHO05D007465 6.6e-155 551.6 462 61.9
Nn6g32416 Nelumbo nucifera HOM05D006127 ORTHO05D007465 7.3e-154 548.1 587 53.3
GSVIVG01028824001 Vitis vinifera HOM05D006127 ORTHO05D007465 1.6e-153 547.0 439 64.5
DCAR_008898 Daucus carota HOM05D006127 ORTHO05D007465 8.9e-152 541.2 544 54.6
Oeu003330.1 Olea europaea HOM05D006127 ORTHO05D007465 2.0e-151 540.0 419 64.9
SGA_v2.0_scaffold60G21123 Striga asiatica HOM05D006127 ORTHO05D007465 9.9e-151 537.7 559 53.1
unitig_747.g21859 Utricularia gibba HOM05D006127 ORTHO05D007465 5.4e-149 531.9 531 55.4
Cpa.g.sc107.127 Carica papaya HOM05D006127 ORTHO05D007465 3.0e-147 526.2 435 63.7
vmacro06616 Vaccinium macrocarpon HOM05D006127 ORTHO05D007465 2.5e-146 523.1 536 55.6
Rhsim03G0192200 Rhododendron simsii HOM05D006127 ORTHO05D007465 2.0e-143 513.5 545 55.6
ATR0721G168 Amborella trichopoda HOM05D006127 ORTHO05D007465 6.4e-142 508.4 495 56.6
Ah.07g206460 Amaranthus hybridus HOM05D006127 ORTHO05D007465 8.4e-142 508.1 553 53.0
Hund04798 Selenicereus undatus HOM05D006127 ORTHO05D007465 4.2e-141 505.8 677 45.9
CDE04G3725 Ceratophyllum demersum HOM05D006127 ORTHO05D007465 4.6e-140 502.3 518 51.9
Zm00001eb119480 Zea mays HOM05D006127 ORTHO05D007465 1.3e-137 494.2 508 53.7
AUR62021102 Chenopodium quinoa HOM05D006127 ORTHO05D007465 7.1e-133 478.4 464 55.6
HPP92_008801 Vanilla planifolia HOM05D006127 ORTHO05D007465 1.6e-132 477.2 525 50.5
FvH4_7g30450 Fragaria vesca HOM05D006127 ORTHO05D007465 2.7e-132 476.5 351 71.5
VMungo0464G0768 Vigna mungo HOM05D006127 ORTHO05D007465 1.8e-131 473.8 312 79.5
Ah.13g069260 Amaranthus hybridus HOM05D006127 ORTHO05D007465 3.1e-128 463.0 413 58.6
Oeu027861.1 Olea europaea HOM05D006127 ORTHO05D007465 7.2e-101 372.1 418 49.3
HPP92_005266 Vanilla planifolia HOM05D006127 ORTHO05D007465 7.9e-100 368.6 376 53.2
BcaB02g09671 Brassica carinata HOM05D006127 ORTHO05D007465 1.4e-96 357.8 475 46.1
Nn1g01683 Nelumbo nucifera HOM05D006127 ORTHO05D007465 3.5e-95 353.2 591 39.8
CDE03G0317 Ceratophyllum demersum HOM05D006127 ORTHO05D007465 1.4e-91 341.3 235 65.5
SGA_v2.0_scaffold192G40622 Striga asiatica HOM05D006127 ORTHO05D007465 4.4e-90 336.3 259 64.9
TPR.G27774 Trifolium pratense HOM05D006127 ORTHO05D007465 5.7e-74 282.7 172 80.8
Mapoly0009s0032 Marchantia polymorpha HOM05D006127 ORTHO05D007465 8.6e-70 268.9 473 36.6
FAN01G1207 Fragaria x ananassa HOM05D006127 ORTHO05D007465 1.1e-69 268.5 228 65.4
AagrBONN_evm.TU.Sc2ySwM_368.2100 Anthoceros agrestis HOM05D006127 ORTHO05D007465 4.3e-69 266.5 550 36.0
Os01g0225300 Oryza sativa ssp. japonica HOM05D006127 ORTHO05D007465 3.5e-63 246.9 285 50.2
arahy.Tifrunner.gnm1.ann1.KML1I1 Arachis hypogaea HOM05D006127 ORTHO05D007465 2.5e-61 240.7 248 56.0
Pp3c17_22580 Physcomitrium patens HOM05D006127 ORTHO05D007465 1.7e-57 228.0 363 36.4
SEGI_03634 Sequoiadendron giganteum HOM05D006127 ORTHO05D007465 1.5e-34 151.8 120 56.7
AL8G39600 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 2.6e-34 151.0 95 75.8
Cfa002216 Carpinus fangiana HOM05D006127 ORTHO05D007465 4.9e-33 146.7 238 42.0
SMO266G0103 Selaginella moellendorffii HOM05D006127 ORTHO05D007465 1.4e-32 145.2 218 33.5
TPR.G9175 Trifolium pratense HOM05D006127 ORTHO05D007465 1.8e-27 128.3 80 80.0
COL.COLO4_36023 Corchorus olitorius HOM05D006127 ORTHO05D161883 3.9e-22 110.5 62 80.6
Ah.13g069250 Amaranthus hybridus HOM05D006127 ORTHO05D007465 1.4e-16 92.0 149 47.0
SEGI_25179 Sequoiadendron giganteum HOM05D006127 ORTHO05D007465 2.5e-13 81.3 65 58.5
Aqoxy1G04253 Aquilegia oxysepala HOM05D006127 ORTHO05D078839 7.9e-07 59.7 49 63.3


User provided reference genes

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