Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_26755_v3 Cicer arietinum L. HOM05D008687 ORTHO05D010822 1.6e-21 105.1 52 100.0
TPR.G20504 Trifolium pratense HOM05D008687 ORTHO05D010822 1.6e-16 88.6 52 82.7
Psat4g160200 Pisum sativum HOM05D008687 ORTHO05D010822 2.2e-15 84.7 52 76.9
Lj3g0001832 Lotus japonicus HOM05D008687 ORTHO05D010822 8.5e-15 82.8 52 78.8
Phvul.010G111800 Phaseolus vulgaris HOM05D008687 ORTHO05D010822 1.9e-14 81.6 52 76.9
Lalb_Chr10g0100361 Lupinus albus HOM05D008687 ORTHO05D010822 1.6e-13 78.6 52 71.2
Lalb_Chr17g0342441 Lupinus albus HOM05D008687 ORTHO05D010822 1.6e-13 78.6 52 73.1
Glyma.07G057502 Glycine max HOM05D008687 ORTHO05D010822 2.1e-13 78.2 52 73.1
Glyma.16G026500 Glycine max HOM05D008687 ORTHO05D010822 4.7e-13 77.0 52 71.2
Manes.01G247900 Manihot esculenta HOM05D008687 ORTHO05D010822 8.8e-12 72.8 52 67.3
Manes.05G025100 Manihot esculenta HOM05D008687 ORTHO05D010822 7.5e-11 69.7 52 65.4
TAR374G0349 Trochodendron aralioides HOM05D008687 ORTHO05D010822 1.3e-10 68.9 52 65.4
CSS0023630 Camellia sinensis var. sinensis HOM05D008687 ORTHO05D010822 1.7e-10 68.6 52 65.4
Nn4g26235 Nelumbo nucifera HOM05D008687 ORTHO05D010822 2.8e-10 67.8 50 64.0
Solyc01g097020.4 Solanum lycopersicum HOM05D008687 ORTHO05D010822 6.3e-10 66.6 52 61.5
Hma1.2p1_0384F.1_g141170 Hydrangea macrophylla HOM05D008687 ORTHO05D010822 5.4e-09 63.5 52 57.7
Nitab4.5_0002247g0150 Nicotiana tabacum HOM05D008687 ORTHO05D010822 1.2e-08 62.4 39 69.2
CiPaw.01G073700 Carya illinoinensis HOM05D008687 ORTHO05D010822 2.0e-08 61.6 52 59.6
MD07G1146600 Malus domestica HOM05D008687 ORTHO05D010822 2.0e-08 61.6 43 67.4
Nitab4.5_0006420g0050 Nicotiana tabacum HOM05D008687 ORTHO05D010822 3.5e-08 60.8 43 60.5
Sc01g0002900 Simmondsia chinensis HOM05D008687 ORTHO05D010822 1.7e-07 58.5 52 53.8
MD01G1077100 Malus domestica HOM05D008687 ORTHO05D010822 2.2e-07 58.2 39 69.2
HanXRQChr06g0166891 Helianthus annuus HOM05D008687 ORTHO05D010822 2.9e-07 57.8 43 58.1
Medtr3g113880 Medicago truncatula HOM05D008687 ORTHO05D010822 2.9e-07 57.8 33 81.8
Migut.B01844 Erythranthe guttata HOM05D008687 ORTHO05D010822 8.5e-07 56.2 52 53.8
RcHm_v2.0_Chr1g0359021 Rosa chinensis HOM05D008687 ORTHO05D010822 8.5e-07 56.2 38 65.8
Gohir.A11G095700 Gossypium hirsutum HOM05D008687 ORTHO05D010822 2.5e-06 54.7 52 57.7
Gohir.D11G100600 Gossypium hirsutum HOM05D008687 ORTHO05D010822 2.5e-06 54.7 52 57.7
Gorai.007G106900 Gossypium raimondii HOM05D008687 ORTHO05D010822 2.5e-06 54.7 52 57.7
GSVIVG01027061001 Vitis vinifera HOM05D008687 ORTHO05D010822 2.5e-06 54.7 43 60.5
COL.COLO4_06317 Corchorus olitorius HOM05D008687 ORTHO05D010822 3.2e-06 54.3 52 55.8
Potri.014G095901 Populus trichocarpa HOM05D008687 ORTHO05D010822 7.2e-06 53.1 52 50.0
Prupe.2G184600 Prunus persica HOM05D008687 ORTHO05D010822 9.5e-06 52.8 34 64.7


User provided reference genes

Program Settings