Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_26709_v3 Cicer arietinum L. HOM05D010881 ORTHO05D026827 0.0e+00 1470.7 724 100.0
SGA_v2.0_scaffold255G45501 Striga asiatica HOM05D010881 ORTHO05D026827 6.5e-36 156.8 84 86.9
Peaxi162Scf00508g00001 Petunia axillaris HOM05D007877 ORTHO05D009957 1.5e-32 145.6 96 79.2
AL3G44360 Arabidopsis lyrata HOM05D010881 ORTHO05D026827 7.4e-32 143.3 79 86.1
TPR.G7850 Trifolium pratense HOM05D008490 ORTHO05D010725 2.0e-29 135.2 102 72.5
Lalb_Chr00c29g0408181 Lupinus albus HOM05D007877 ORTHO05D009957 6.1e-26 123.6 61 96.7
Lalb_Chr22g0358751 Lupinus albus HOM05D007877 ORTHO05D009957 6.1e-26 123.6 61 96.7
TPR.G17000 Trifolium pratense HOM05D007877 ORTHO05D009957 6.1e-26 123.6 61 96.7
RcHm_v2.0_MTg0499111 Rosa chinensis HOM05D007877 ORTHO05D009957 2.3e-25 121.7 61 95.1
LjContig00315g0025322 Lotus japonicus HOM05D007877 ORTHO05D009957 3.0e-25 121.3 61 95.1
Cfa023045 Carpinus fangiana HOM05D010881 ORTHO05D028448 3.3e-24 117.9 69 85.5
Dinv06684 Davidia involucrata HOM05D010881 ORTHO05D014572 3.3e-24 117.9 73 79.5
CANSAT16G0008 Cannabis sativa HOM05D007877 ORTHO05D009957 5.7e-24 117.1 61 93.4
Lj2P1225T96 Lonicera japonica HOM05D007877 ORTHO05D009957 5.7e-24 117.1 61 93.4
CsaV3_UNG208000 Cucumis sativus L. HOM05D007877 ORTHO05D009957 1.3e-23 115.9 61 91.8
Solyc00g500168.1 Solanum lycopersicum HOM05D007877 ORTHO05D009957 3.7e-23 114.4 61 90.2
Solyc00g500346.1 Solanum lycopersicum HOM05D007877 ORTHO05D009957 3.7e-23 114.4 61 90.2
Solyc00g500357.1 Solanum lycopersicum HOM05D007877 ORTHO05D009957 3.7e-23 114.4 61 90.2
Gohir.A01G022475 Gossypium hirsutum HOM05D007877 ORTHO05D009957 4.8e-23 114.0 61 90.2
CDE02G4325 Ceratophyllum demersum HOM05D010881 ORTHO05D028448 3.1e-22 111.3 70 78.6
Zm00001eb436210 Zea mays HOM05D007877 ORTHO05D009957 3.1e-22 111.3 61 88.5
Zm00001eb436260 Zea mays HOM05D007877 ORTHO05D009957 3.1e-22 111.3 61 88.5
Zm00001eb436450 Zea mays HOM05D007877 ORTHO05D009957 3.1e-22 111.3 61 88.5
Zm00001eb436490 Zea mays HOM05D007877 ORTHO05D009957 3.1e-22 111.3 61 88.5
Zm00001eb441030 Zea mays HOM05D007877 ORTHO05D009957 3.1e-22 111.3 61 88.5
HanXRQChr00c0055g0571431 Helianthus annuus HOM05D007877 ORTHO05D009957 4.1e-22 110.9 61 91.8
HanXRQMTg0579501 Helianthus annuus HOM05D007877 ORTHO05D009957 4.1e-22 110.9 61 91.8
CARHR282940 Cardamine hirsuta HOM05D007877 ORTHO05D009957 1.5e-21 109.0 61 85.2
Gorai.001G166700 Gossypium raimondii HOM05D007877 ORTHO05D009957 1.5e-21 109.0 57 91.2
Aa31csc239G30 Aethionema arabicum HOM05D007877 ORTHO05D009957 2.0e-21 108.6 61 83.6
CDE02G1629 Ceratophyllum demersum HOM05D010881 ORTHO05D028448 2.0e-21 108.6 69 78.3
ATMG00570 Arabidopsis thaliana HOM05D007877 ORTHO05D009957 1.3e-20 105.9 61 83.6
AUR62042354 Chenopodium quinoa HOM05D000743 ORTHO05D000580 2.2e-20 105.1 58 87.9
AUR62043788 Chenopodium quinoa HOM05D000743 ORTHO05D000580 2.2e-20 105.1 58 87.9
AUR62043917 Chenopodium quinoa HOM05D000743 ORTHO05D000580 2.2e-20 105.1 58 87.9
Nitab4.5_0015438g0010 Nicotiana tabacum HOM05D007877 ORTHO05D009957 8.5e-20 103.2 53 92.5
Thhalv10015628m.g Eutrema salsugineum HOM05D007877 ORTHO05D009957 6.1e-18 97.1 57 80.7
CAN.G266.9 Capsicum annuum HOM05D010881 ORTHO05D028448 1.0e-17 96.3 70 72.9
CDE02G3985 Ceratophyllum demersum HOM05D008490 ORTHO05D010725 1.0e-17 96.3 85 62.4
Solyc05g023960.1 Solanum lycopersicum HOM05D007877 ORTHO05D009957 1.4e-17 95.9 61 73.8
DCAR_032450 Daucus carota HOM05D007877 ORTHO05D009957 2.3e-17 95.1 49 89.8
Oeu056428.1 Olea europaea HOM05D010881 ORTHO05D026827 5.2e-17 94.0 79 65.8
Ca_17162_v3 Cicer arietinum L. HOM05D000743 ORTHO05D000580 1.7e-15 89.0 43 90.7
Nitab4.5_0000172g2240 Nicotiana tabacum HOM05D007877 ORTHO05D009957 6.3e-15 87.0 49 83.7
PSO541G3164 Papaver somniferum HOM05D007877 ORTHO05D009957 1.4e-14 85.9 84 58.3
SGA_v2.0_scaffold255G45499 Striga asiatica HOM05D001560 ORTHO05D010994 1.8e-14 85.5 97 53.6
SHI24736 Sapria himalayana HOM05D007877 ORTHO05D009957 5.3e-14 84.0 120 42.5
PSO133G0099 Papaver somniferum HOM05D007877 ORTHO05D009957 9.1e-14 83.2 66 63.6
unitig_87.g27953 Utricularia gibba HOM05D008490 ORTHO05D010725 9.1e-14 83.2 46 87.0
PSO384G0556 Papaver somniferum HOM05D007877 ORTHO05D009957 1.7e-12 79.0 61 65.6
Sc11g0004340 Simmondsia chinensis HOM05D008490 ORTHO05D010725 1.5e-11 75.9 40 90.0
Solyc10g062060.1 Solanum lycopersicum HOM05D007877 ORTHO05D009957 5.5e-11 73.9 53 67.9
Phvul.005G124700 Phaseolus vulgaris HOM05D007877 ORTHO05D009957 9.4e-11 73.2 35 97.1
Lsat_1_v5_gn_9_45601 Lactuca sativa HOM05D007877 ORTHO05D009957 3.6e-10 71.2 40 82.5
SHI32359 Sapria himalayana HOM05D007877 ORTHO05D009957 4.0e-09 67.8 96 47.9
Sc14g0003240 Simmondsia chinensis HOM05D008490 ORTHO05D010725 4.0e-09 67.8 38 86.8
SHI48166 Sapria himalayana HOM05D007877 ORTHO05D009957 3.3e-08 64.7 40 72.5
A04p09500 Brassica napus HOM05D008490 ORTHO05D010725 9.7e-08 63.2 38 81.6
Nitab4.5_0000866g0160 Nicotiana tabacum HOM05D008490 ORTHO05D010725 9.7e-08 63.2 47 70.2
C05p52630 Brassica napus HOM05D008490 ORTHO05D010725 1.8e-06 58.9 30 93.3
Actinidia34838 Actinidia chinensis HOM05D008490 ORTHO05D010725 2.4e-06 58.5 38 78.9
Nitab4.5_0001681g0060 Nicotiana tabacum HOM05D007877 ORTHO05D009957 4.1e-06 57.8 30 86.7
Solyc00g500237.1 Solanum lycopersicum HOM05D007877 ORTHO05D009957 7.0e-06 57.0 29 89.7
C04p19590 Brassica napus HOM05D007877 ORTHO05D009957 9.1e-06 56.6 30 86.7


User provided reference genes

Program Settings