Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_26696_v3 Cicer arietinum L. HOM05D006302 ORTHO05D007960 0.0e+00 1634.4 845 100.0
Ca_23670_v3 Cicer arietinum L. HOM05D006302 ORTHO05D007960 0.0e+00 1561.6 834 97.8
TPR.G28992 Trifolium pratense HOM05D006302 ORTHO05D007960 0.0e+00 1351.3 837 84.3
Ca_22760_v3 Cicer arietinum L. HOM05D006302 ORTHO05D007960 0.0e+00 1335.5 671 100.0
Medtr4g016590 Medicago truncatula HOM05D006302 ORTHO05D007960 0.0e+00 1308.5 835 83.7
Ca_05032_v3 Cicer arietinum L. HOM05D006302 ORTHO05D007960 0.0e+00 1297.7 652 100.0
Psat1g124600 Pisum sativum HOM05D006302 ORTHO05D007960 0.0e+00 1295.8 837 81.5
Glyma.16G219200 Glycine max HOM05D006302 ORTHO05D007960 0.0e+00 1192.6 839 76.6
Lj2g0026336 Lotus japonicus HOM05D006302 ORTHO05D007960 0.0e+00 1168.7 842 75.8
Phvul.004G145200 Phaseolus vulgaris HOM05D006302 ORTHO05D007960 0.0e+00 1147.5 840 73.9
Lalb_Chr14g0370421 Lupinus albus HOM05D006302 ORTHO05D007960 0.0e+00 1117.4 840 70.1
VMungo0464G0980 Vigna mungo HOM05D006302 ORTHO05D007960 0.0e+00 1104.0 842 71.9
arahy.Tifrunner.gnm1.ann1.2W4JQ8 Arachis hypogaea HOM05D006302 ORTHO05D007960 0.0e+00 1078.5 855 70.3
arahy.Tifrunner.gnm1.ann1.YU9TRY Arachis hypogaea HOM05D006302 ORTHO05D007960 1.2e-307 1059.7 891 67.3
RcHm_v2.0_Chr7g0177661 Rosa chinensis HOM05D006302 ORTHO05D007960 1.7e-258 896.3 837 60.1
FAN13G0246 Fragaria x ananassa HOM05D006302 ORTHO05D007960 9.3e-252 874.0 817 59.5
QL10p033145 Quercus lobata HOM05D006302 ORTHO05D007960 1.1e-247 860.5 819 60.0
FAN04G1871 Fragaria x ananassa HOM05D006302 ORTHO05D007960 3.4e-246 855.5 836 58.4
TAR629G0371 Trochodendron aralioides HOM05D006302 ORTHO05D007960 5.8e-246 854.7 826 57.5
Prupe.5G239800 Prunus persica HOM05D006302 ORTHO05D007960 1.3e-245 853.6 845 57.5
TWI81G1078 Tripterygium wilfordii HOM05D006302 ORTHO05D007960 2.2e-245 852.8 846 56.3
FvH4_5g17940 Fragaria vesca HOM05D006302 ORTHO05D007960 2.9e-245 852.4 822 59.1
MD14G1242200 Malus domestica HOM05D006302 ORTHO05D007960 8.4e-245 850.9 832 57.7
FAN18G4444 Fragaria x ananassa HOM05D006302 ORTHO05D007960 3.2e-244 849.0 844 57.9
GSVIVG01012939001 Vitis vinifera HOM05D006302 ORTHO05D007960 4.6e-243 845.1 818 56.7
FAN08G1906 Fragaria x ananassa HOM05D006302 ORTHO05D007960 7.9e-243 844.3 822 59.0
CiPaw.15G150000 Carya illinoinensis HOM05D006302 ORTHO05D007960 7.4e-241 837.8 841 57.6
Dinv19314 Davidia involucrata HOM05D006302 ORTHO05D007960 7.4e-241 837.8 864 56.9
PGR083G1118 Punica granatum HOM05D006302 ORTHO05D007960 7.4e-241 837.8 828 57.6
ClCG01G014910 Citrullus lanatus HOM05D006302 ORTHO05D007960 2.1e-240 836.3 838 56.0
Haze_18958 Corylus avellana HOM05D006302 ORTHO05D007960 1.1e-239 833.9 910 55.6
Nn4g24592 Nelumbo nucifera HOM05D006302 ORTHO05D007960 4.9e-237 825.1 824 57.4
Sabra15G0027400 Salix brachista HOM05D006302 ORTHO05D007960 6.4e-237 824.7 847 54.9
Sed0020457 Sechium edule HOM05D006302 ORTHO05D007960 8.4e-237 824.3 841 55.8
MELO3C002158.2 Cucumis melo HOM05D006302 ORTHO05D007960 1.1e-236 823.9 837 55.4
Manes.06G000900 Manihot esculenta HOM05D006302 ORTHO05D007960 4.2e-236 822.0 837 57.2
CsaV3_1G007420 Cucumis sativus L. HOM05D006302 ORTHO05D007960 2.7e-235 819.3 837 54.8
Potri.015G033300 Populus trichocarpa HOM05D006302 ORTHO05D007960 2.7e-235 819.3 823 55.0
Gohir.D02G118900 Gossypium hirsutum HOM05D006302 ORTHO05D007960 1.0e-234 817.4 811 57.0
Gorai.005G134900 Gossypium raimondii HOM05D006302 ORTHO05D007960 6.7e-234 814.7 811 56.8
Thecc.03G067700 Theobroma cacao HOM05D006302 ORTHO05D007960 1.6e-232 810.1 832 54.3
Gohir.A03G090800 Gossypium hirsutum HOM05D006302 ORTHO05D007960 8.4e-229 797.7 812 56.4
CSS0040809 Camellia sinensis var. sinensis HOM05D006302 ORTHO05D007960 4.2e-228 795.4 707 59.1
Eucgr.H00592 Eucalyptus grandis HOM05D006302 ORTHO05D007960 7.1e-228 794.7 838 54.2
Ciclev10018592m.g Citrus clementina HOM05D006302 ORTHO05D007960 1.3e-226 790.4 832 55.2
Rhsim09G0028600 Rhododendron simsii HOM05D006302 ORTHO05D007960 1.8e-226 790.0 839 52.9
Atru.chr9.205 Acer truncatum HOM05D006302 ORTHO05D007960 6.7e-226 788.1 847 54.9
Duzib084G0934 Durio zibethinus HOM05D006302 ORTHO05D007960 6.7e-226 788.1 802 56.5
Sopen03g028860 Solanum pennellii HOM05D006302 ORTHO05D007960 1.1e-223 780.8 865 53.2
Solyc03g098160.3 Solanum lycopersicum HOM05D006302 ORTHO05D007960 3.8e-221 772.3 865 52.8
Actinidia34644 Actinidia chinensis HOM05D006302 ORTHO05D007960 1.0e-218 764.2 839 53.5
CSS0030577 Camellia sinensis var. sinensis HOM05D006302 ORTHO05D007960 1.8e-218 763.5 707 57.7
Cc04_g09070 Coffea canephora HOM05D006302 ORTHO05D007960 3.9e-218 762.3 848 52.4
CAN.G637.21 Capsicum annuum HOM05D006302 ORTHO05D007960 1.3e-216 757.3 841 53.4
Nitab4.5_0001180g0010 Nicotiana tabacum HOM05D006302 ORTHO05D007960 5.3e-215 751.9 857 52.9
MSTRG.23195 Avicennia marina HOM05D006302 ORTHO05D007960 3.4e-214 749.2 842 51.9
PSO063G0294 Papaver somniferum HOM05D006302 ORTHO05D007960 2.9e-213 746.1 822 54.1
THA.LOC104821822 Tarenaya hassleriana HOM05D006302 ORTHO05D007960 2.9e-213 746.1 815 53.5
vmacro22676 Vaccinium macrocarpon HOM05D006302 ORTHO05D007960 4.2e-212 742.3 904 48.9
Nitab4.5_0005200g0040 Nicotiana tabacum HOM05D006302 ORTHO05D007960 1.6e-211 740.3 832 53.4
Lj9C414G14 Lonicera japonica HOM05D006302 ORTHO05D007960 1.7e-208 730.3 656 59.5
DCAR_010206 Daucus carota HOM05D006302 ORTHO05D007960 2.8e-208 729.6 833 52.1
AUR62034018 Chenopodium quinoa HOM05D006302 ORTHO05D007960 1.1e-207 727.6 836 51.0
Sp3g15860 Schrenkiella parvula HOM05D006302 ORTHO05D007960 1.5e-206 723.8 822 51.7
Migut.O00235 Erythranthe guttata HOM05D006302 ORTHO05D007960 4.5e-206 722.2 825 51.8
AL3G30880 Arabidopsis lyrata HOM05D006302 ORTHO05D007960 1.7e-205 720.3 813 52.0
Carub.0003s1747 Capsella rubella HOM05D006302 ORTHO05D007960 5.5e-204 715.3 819 51.5
Thhalv10019937m.g Eutrema salsugineum HOM05D006302 ORTHO05D007960 5.5e-204 715.3 818 50.1
SalBow5G5149 Salvia bowleyana HOM05D006302 ORTHO05D007960 2.3e-202 709.9 708 54.1
SalBow5G5312 Salvia bowleyana HOM05D006302 ORTHO05D007960 2.3e-202 709.9 708 54.1
HanXRQChr01g0002621 Helianthus annuus HOM05D006302 ORTHO05D007960 5.2e-202 708.8 831 51.0
ECA238G1211 Erigeron canadensis HOM05D006302 ORTHO05D007960 6.3e-200 701.8 707 53.9
Lsat_1_v5_gn_2_15380 Lactuca sativa HOM05D006302 ORTHO05D007960 8.2e-200 701.4 825 50.5
AT3G17740 Arabidopsis thaliana HOM05D006302 ORTHO05D007960 1.1e-199 701.0 808 50.4
Peaxi162Scf00171g00631 Petunia axillaris HOM05D006302 ORTHO05D007960 5.3e-199 698.7 852 49.8
C05p48650 Brassica napus HOM05D006302 ORTHO05D007960 2.0e-198 696.8 823 50.4
BolC5t33600H Brassica oleracea HOM05D006302 ORTHO05D007960 2.0e-198 696.8 823 50.4
Aa31LG8G4630 Aethionema arabicum HOM05D006302 ORTHO05D007960 1.0e-197 694.5 844 49.2
BcaC05g28760 Brassica carinata HOM05D006302 ORTHO05D007960 8.0e-195 684.9 827 50.4
SGA_v2.0_scaffold90G27777 Striga asiatica HOM05D006302 ORTHO05D007960 2.4e-191 673.3 873 48.1
Oeu060652.1 Olea europaea HOM05D006302 ORTHO05D007960 3.1e-191 672.9 833 48.7
EL10Ac8g19491 Beta vulgaris HOM05D006302 ORTHO05D007960 1.2e-190 671.0 837 50.9
AT3G17712 Arabidopsis thaliana HOM05D006302 ORTHO05D007960 5.9e-190 668.7 784 49.7
CDE07G1110 Ceratophyllum demersum HOM05D006302 ORTHO05D007960 1.1e-188 664.5 822 48.5
SHI19119 Sapria himalayana HOM05D006302 ORTHO05D007960 1.9e-188 663.7 837 48.1
COL.COLO4_09239 Corchorus olitorius HOM05D006302 ORTHO05D007960 1.2e-185 654.4 682 52.3
A05p32110 Brassica napus HOM05D006302 ORTHO05D007960 8.3e-184 648.3 664 54.1
ATR0598G116 Amborella trichopoda HOM05D006302 ORTHO05D007960 4.1e-183 646.0 813 47.8
HPP92_002770 Vanilla planifolia HOM05D006302 ORTHO05D007960 1.1e-180 637.9 824 47.5
Zm00001eb256430 Zea mays HOM05D006302 ORTHO05D007960 1.1e-180 637.9 837 44.7
BraA05t22040Z Brassica rapa HOM05D006302 ORTHO05D007960 3.1e-175 619.8 825 46.2
Os02g0772500 Oryza sativa ssp. japonica HOM05D006302 ORTHO05D007960 1.3e-173 614.4 809 46.6
Cpa.g.sc7.123 Carica papaya HOM05D006302 ORTHO05D007960 8.9e-170 601.7 492 63.8
SEGI_33145 Sequoiadendron giganteum HOM05D006302 ORTHO05D007960 3.7e-152 543.1 825 42.1
unitig_22.g5442 Utricularia gibba HOM05D006302 ORTHO05D007960 1.9e-127 461.1 822 37.2
Glyma.09G169600 Glycine max HOM05D006302 ORTHO05D007960 1.9e-116 424.5 302 71.9
AagrBONN_evm.TU.Sc2ySwM_362.1719 Anthoceros agrestis HOM05D006302 ORTHO05D007960 9.6e-116 422.2 704 38.2
C05p48600 Brassica napus HOM05D006302 ORTHO05D007960 6.5e-112 409.5 432 53.7
SMO340G0100 Selaginella moellendorffii HOM05D006302 ORTHO05D007960 5.1e-109 399.8 800 35.1
CARHR093080 Cardamine hirsuta HOM05D006302 ORTHO05D007960 2.4e-106 391.0 394 54.6
Pp3c9_1610 Physcomitrium patens HOM05D006302 ORTHO05D007960 1.2e-102 378.6 860 34.7
Pp3c9_1614 Physcomitrium patens HOM05D006302 ORTHO05D007960 1.2e-102 378.6 860 34.7
Sc10g0008940 Simmondsia chinensis HOM05D006302 ORTHO05D007960 6.7e-101 372.9 399 50.4
Sc10g0008950 Simmondsia chinensis HOM05D006302 ORTHO05D007960 7.4e-100 369.4 414 52.9
Mapoly0172s0015 Marchantia polymorpha HOM05D006302 ORTHO05D007960 2.8e-99 367.5 627 36.2
CBR_g4862 Chara braunii HOM05D006302 ORTHO05D007960 2.0e-76 291.6 650 30.2
Cre13.g589650 Chlamydomonas reinhardtii HOM05D006302 ORTHO05D007960 2.1e-25 122.1 499 24.8
CAN.G852.1 Capsicum annuum HOM05D006302 ORTHO05D007960 3.4e-12 78.2 99 45.5
Actinidia04194 Actinidia chinensis HOM05D006302 ORTHO05D007960 3.0e-08 65.1 70 48.6
Medtr6g074790 Medicago truncatula HOM05D006302 ORTHO05D007960 9.6e-07 60.1 46 67.4


User provided reference genes

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