Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_26677_v3 Cicer arietinum L. HOM05D004435 ORTHO05D005103 2.6e-39 164.9 78 100.0
Ca_23520_v3 Cicer arietinum L. HOM05D004435 ORTHO05D005103 2.1e-33 145.2 75 90.7
Glyma.07G054500 Glycine max HOM05D004435 ORTHO05D005103 5.2e-32 140.6 75 89.3
Lalb_Chr10g0100641 Lupinus albus HOM05D004435 ORTHO05D005103 5.2e-32 140.6 75 89.3
Psat4g214760 Pisum sativum HOM05D004435 ORTHO05D005103 6.8e-32 140.2 75 88.0
Medtr8g027425 Medicago truncatula HOM05D004435 ORTHO05D005103 2.0e-31 138.7 75 88.0
Phvul.010G115000 Phaseolus vulgaris HOM05D004435 ORTHO05D005103 2.6e-31 138.3 75 88.0
TPR.G20238 Trifolium pratense HOM05D004435 ORTHO05D005103 2.6e-31 138.3 75 88.0
VMungo0331G1532 Vigna mungo HOM05D004435 ORTHO05D005103 3.4e-31 137.9 75 86.7
Nn1g00298 Nelumbo nucifera HOM05D004435 ORTHO05D005103 2.2e-30 135.2 74 83.8
arahy.Tifrunner.gnm1.ann1.VXNL4X Arachis hypogaea HOM05D004435 ORTHO05D005103 2.8e-30 134.8 75 85.3
arahy.Tifrunner.gnm1.ann1.Y0VUSY Arachis hypogaea HOM05D004435 ORTHO05D005103 2.8e-30 134.8 75 85.3
Ciclev10018429m.g Citrus clementina HOM05D004435 ORTHO05D005103 2.8e-30 134.8 75 85.3
CiPaw.01G077800 Carya illinoinensis HOM05D004435 ORTHO05D005103 3.7e-30 134.4 75 82.7
Sabra02G0140000 Salix brachista HOM05D004435 ORTHO05D005103 4.8e-30 134.0 75 82.7
FAN03G2945 Fragaria x ananassa HOM05D004435 ORTHO05D005103 6.3e-30 133.7 75 84.0
FAN06G0620 Fragaria x ananassa HOM05D004435 ORTHO05D005103 6.3e-30 133.7 75 84.0
FAN06G2443 Fragaria x ananassa HOM05D004435 ORTHO05D005103 6.3e-30 133.7 75 84.0
FAN10G0386 Fragaria x ananassa HOM05D004435 ORTHO05D005103 6.3e-30 133.7 75 84.0
FAN10G3841 Fragaria x ananassa HOM05D004435 ORTHO05D005103 6.3e-30 133.7 75 84.0
RcHm_v2.0_Chr1g0360111 Rosa chinensis HOM05D004435 ORTHO05D005103 6.3e-30 133.7 75 84.0
Actinidia20252 Actinidia chinensis HOM05D004435 ORTHO05D005103 8.3e-30 133.3 75 84.0
Potri.002G173300 Populus trichocarpa HOM05D004435 ORTHO05D005103 1.1e-29 132.9 75 81.3
Atru.chr5.694 Acer truncatum HOM05D004435 ORTHO05D005103 1.4e-29 132.5 75 84.0
Lj3g0005802 Lotus japonicus HOM05D004435 ORTHO05D005103 1.4e-29 132.5 75 84.0
GSVIVG01027171001 Vitis vinifera HOM05D004435 ORTHO05D005103 1.4e-29 132.5 75 82.7
MD01G1083800 Malus domestica HOM05D004435 ORTHO05D005103 1.8e-29 132.1 75 82.7
Manes.01G244500 Manihot esculenta HOM05D004435 ORTHO05D005103 1.8e-29 132.1 75 82.7
Prupe.2G190800 Prunus persica HOM05D004435 ORTHO05D005103 1.8e-29 132.1 75 82.7
FvH4_7g16880 Fragaria vesca HOM05D004435 ORTHO05D005103 2.4e-29 131.7 75 82.7
DCAR_008666 Daucus carota HOM05D004435 ORTHO05D005103 4.1e-29 131.0 75 78.7
DCAR_008667 Daucus carota HOM05D004435 ORTHO05D005103 4.1e-29 131.0 75 78.7
Rhsim07G0003000 Rhododendron simsii HOM05D004435 ORTHO05D005103 4.1e-29 131.0 75 81.3
COL.COLO4_06228 Corchorus olitorius HOM05D004435 ORTHO05D005103 5.4e-29 130.6 74 82.4
CANSAT56G0169 Cannabis sativa HOM05D004435 ORTHO05D005103 7.0e-29 130.2 74 82.4
ClCG05G000720 Citrullus lanatus HOM05D004435 ORTHO05D005103 7.0e-29 130.2 74 81.1
MELO3C006012.2 Cucumis melo HOM05D004435 ORTHO05D005103 7.0e-29 130.2 74 81.1
CsaV3_3G007940 Cucumis sativus L. HOM05D004435 ORTHO05D005103 7.0e-29 130.2 74 81.1
Duzib133G0905 Durio zibethinus HOM05D004435 ORTHO05D005103 7.0e-29 130.2 74 82.4
PSO135G0708 Papaver somniferum HOM05D004435 ORTHO05D005103 7.0e-29 130.2 75 76.0
PSO384G1989 Papaver somniferum HOM05D004435 ORTHO05D005103 7.0e-29 130.2 75 76.0
Thecc.01G340200 Theobroma cacao HOM05D004435 ORTHO05D005103 7.0e-29 130.2 74 82.4
Peaxi162Scf00345g00125 Petunia axillaris HOM05D004435 ORTHO05D005103 1.6e-28 129.0 75 78.7
MBI06_g44136_MAGBIO Magnolia biondii HOM05D004435 ORTHO05D005103 2.0e-28 128.6 75 81.3
MBI06_g46370_MAGBIO Magnolia biondii HOM05D004435 ORTHO05D005103 2.0e-28 128.6 75 81.3
ATR0605G027 Amborella trichopoda HOM05D004435 ORTHO05D005103 5.9e-28 127.1 74 79.7
Nitab4.5_0001763g0010 Nicotiana tabacum HOM05D004435 ORTHO05D005103 5.9e-28 127.1 75 78.7
Solyc01g096110.3 Solanum lycopersicum HOM05D004435 ORTHO05D005103 5.9e-28 127.1 75 78.7
Sopen01g039830 Solanum pennellii HOM05D004435 ORTHO05D005103 5.9e-28 127.1 75 78.7
Hma1.2p1_0101F.1_g049290 Hydrangea macrophylla HOM05D004435 ORTHO05D005103 7.7e-28 126.7 74 81.1
Nitab4.5_0007244g0020 Nicotiana tabacum HOM05D004435 ORTHO05D005103 7.7e-28 126.7 75 77.3
CSS0028718 Camellia sinensis var. sinensis HOM05D004435 ORTHO05D005103 1.0e-27 126.3 75 78.7
Cc02_g39580 Coffea canephora HOM05D004435 ORTHO05D005103 1.0e-27 126.3 75 78.7
Dinv34221 Davidia involucrata HOM05D004435 ORTHO05D005103 1.0e-27 126.3 70 81.4
vmacro04283 Vaccinium macrocarpon HOM05D004435 ORTHO05D005103 1.0e-27 126.3 75 78.7
Gohir.D11G102800 Gossypium hirsutum HOM05D004435 ORTHO05D005103 1.7e-27 125.6 74 81.1
Gorai.007G109900 Gossypium raimondii HOM05D004435 ORTHO05D005103 1.7e-27 125.6 74 81.1
Lsat_1_v5_gn_4_33701 Lactuca sativa HOM05D004435 ORTHO05D005103 1.7e-27 125.6 75 80.0
Sed0001978 Sechium edule HOM05D004435 ORTHO05D005103 1.7e-27 125.6 74 79.7
Lj7A498G38 Lonicera japonica HOM05D004435 ORTHO05D005103 2.2e-27 125.2 75 77.3
QL08p045721 Quercus lobata HOM05D004435 ORTHO05D005103 2.2e-27 125.2 75 78.7
Aqoxy1G03073 Aquilegia oxysepala HOM05D004435 ORTHO05D005103 2.9e-27 124.8 75 76.0
CAN.G1415.18 Capsicum annuum HOM05D004435 ORTHO05D005103 2.9e-27 124.8 75 77.3
Gohir.A11G098100 Gossypium hirsutum HOM05D004435 ORTHO05D005103 3.8e-27 124.4 74 79.7
Os01g0551900 Oryza sativa ssp. japonica HOM05D004435 ORTHO05D005103 6.5e-27 123.6 75 76.0
Cfa003785 Carpinus fangiana HOM05D004435 ORTHO05D005103 8.5e-27 123.2 75 78.7
Migut.B01890 Erythranthe guttata HOM05D004435 ORTHO05D005103 8.5e-27 123.2 75 74.7
SMO203G0146 Selaginella moellendorffii HOM05D004435 ORTHO05D005103 8.5e-27 123.2 74 75.7
ECA234G2843 Erigeron canadensis HOM05D004435 ORTHO05D005103 1.1e-26 122.9 75 78.7
C04p01360 Brassica napus HOM05D004435 ORTHO05D005103 1.5e-26 122.5 75 78.7
BolC4t21789H Brassica oleracea HOM05D004435 ORTHO05D005103 1.5e-26 122.5 75 78.7
BraA05t19122Z Brassica rapa HOM05D004435 ORTHO05D005103 1.5e-26 122.5 75 78.7
Atru.chr5.691 Acer truncatum HOM05D004435 ORTHO05D005103 1.9e-26 122.1 68 82.4
THA.LOC104802083 Tarenaya hassleriana HOM05D004435 ORTHO05D005103 1.9e-26 122.1 74 79.7
Thhalv10001279m.g Eutrema salsugineum HOM05D004435 ORTHO05D005103 2.5e-26 121.7 75 77.3
HanXRQChr17g0563351 Helianthus annuus HOM05D004435 ORTHO05D005103 3.2e-26 121.3 75 77.3
Aa31LG1G27940 Aethionema arabicum HOM05D004435 ORTHO05D005103 7.2e-26 120.2 75 76.0
A05p01210 Brassica napus HOM05D004435 ORTHO05D005103 7.2e-26 120.2 75 77.3
Carub.0004s2928 Capsella rubella HOM05D004435 ORTHO05D005103 7.2e-26 120.2 75 76.0
Eucgr.E00041 Eucalyptus grandis HOM05D004435 ORTHO05D005103 7.2e-26 120.2 75 76.0
Sc01g0002520 Simmondsia chinensis HOM05D004435 ORTHO05D005103 7.2e-26 120.2 70 80.0
TWI14G0481 Tripterygium wilfordii HOM05D004435 ORTHO05D005103 7.2e-26 120.2 74 78.4
TAR374G0936 Trochodendron aralioides HOM05D004435 ORTHO05D005103 7.2e-26 120.2 68 82.4
AL4G45990 Arabidopsis lyrata HOM05D004435 ORTHO05D005103 2.1e-25 118.6 75 76.0
AT2G46560 Arabidopsis thaliana HOM05D004435 ORTHO05D005103 2.7e-25 118.2 75 74.7
CARHR141900 Cardamine hirsuta HOM05D004435 ORTHO05D005103 2.7e-25 118.2 75 76.0
Sp4g28610 Schrenkiella parvula HOM05D004435 ORTHO05D005103 2.7e-25 118.2 75 76.0
Hund27186 Selenicereus undatus HOM05D004435 ORTHO05D005103 2.7e-25 118.2 73 75.3
Zm00001eb356500 Zea mays HOM05D004435 ORTHO05D005103 4.7e-25 117.5 75 72.0
PGR044G1747 Punica granatum HOM05D004435 ORTHO05D005103 3.0e-24 114.8 75 69.3
BcaC02g12673 Brassica carinata HOM05D004435 ORTHO05D005103 4.0e-24 114.4 68 80.9
Ah.05g179380 Amaranthus hybridus HOM05D004435 ORTHO05D005103 1.2e-23 112.8 75 72.0
SEGI_02021 Sequoiadendron giganteum HOM05D004435 ORTHO05D005103 1.5e-23 112.5 67 76.1
EL10Ac1g00244 Beta vulgaris HOM05D004435 ORTHO05D005103 2.6e-23 111.7 75 69.3
AagrBONN_evm.TU.Sc2ySwM_228.2861 Anthoceros agrestis HOM05D004435 ORTHO05D005103 5.7e-23 110.5 74 67.6
SGA_v2.0_scaffold5G03029 Striga asiatica HOM05D004435 ORTHO05D005103 2.2e-22 108.6 75 65.3
CDE10G1324 Ceratophyllum demersum HOM05D004435 ORTHO05D005103 2.4e-21 105.1 75 66.7
Pp3c3_34200 Physcomitrium patens HOM05D004435 ORTHO05D005103 7.0e-21 103.6 74 62.2
Haze_15676 Corylus avellana HOM05D004435 ORTHO05D005103 4.5e-20 100.9 56 83.9
HPP92_020189 Vanilla planifolia HOM05D004435 ORTHO05D005103 7.7e-20 100.1 74 62.2
AUR62004511 Chenopodium quinoa HOM05D004435 ORTHO05D005103 5.0e-19 97.4 72 61.1
unitig_736.g22808 Utricularia gibba HOM05D004435 ORTHO05D005103 5.7e-15 84.0 65 58.5
Actinidia20096 Actinidia chinensis HOM05D004435 ORTHO05D005103 2.9e-14 81.6 55 69.1


User provided reference genes

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