Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_26672_v3 Cicer arietinum L. HOM05D004666 ORTHO05D005822 0.0e+00 1993.0 982 100.0
Ca_30723_v3 Cicer arietinum L. HOM05D004666 ORTHO05D005822 0.0e+00 1993.0 982 100.0
TPR.G35431 Trifolium pratense HOM05D004666 ORTHO05D005822 0.0e+00 1352.4 985 71.1
Medtr1g060580 Medicago truncatula HOM05D004666 ORTHO05D005822 0.0e+00 1286.9 1036 67.3
Psat6g082920 Pisum sativum HOM05D004666 ORTHO05D005822 0.0e+00 1238.0 1008 64.7
Lj5g0013478 Lotus japonicus HOM05D004666 ORTHO05D005822 0.0e+00 1201.4 1043 60.8
Glyma.10G068100 Glycine max HOM05D004666 ORTHO05D005822 0.0e+00 1164.1 1096 58.1
Phvul.011G176600 Phaseolus vulgaris HOM05D004666 ORTHO05D005822 0.0e+00 1120.1 1122 55.8
Lalb_Chr02g0155381 Lupinus albus HOM05D004666 ORTHO05D005822 0.0e+00 1112.8 1130 54.8
VMungo0720G2175 Vigna mungo HOM05D004666 ORTHO05D005822 0.0e+00 1108.6 1191 52.6
Phvul.007G229800 Phaseolus vulgaris HOM05D004666 ORTHO05D005822 0.0e+00 1106.3 1130 55.5
Lj5g0018797 Lotus japonicus HOM05D004666 ORTHO05D005822 0.0e+00 1102.4 1009 59.6
arahy.Tifrunner.gnm1.ann1.WFL2XE Arachis hypogaea HOM05D004666 ORTHO05D005822 1.4e-291 1006.5 980 55.7
arahy.Tifrunner.gnm1.ann1.G8H5C8 Arachis hypogaea HOM05D004666 ORTHO05D005822 2.5e-288 995.7 1013 54.8
arahy.Tifrunner.gnm1.ann1.T4KAXF Arachis hypogaea HOM05D004666 ORTHO05D005822 1.9e-285 986.1 1052 52.9
arahy.Tifrunner.gnm1.ann1.LSN657 Arachis hypogaea HOM05D004666 ORTHO05D005822 3.3e-269 932.2 1024 52.2
CiPaw.09G011000 Carya illinoinensis HOM05D004666 ORTHO05D005822 3.3e-224 782.7 1001 46.2
Cfa002067 Carpinus fangiana HOM05D004666 ORTHO05D005822 7.5e-221 771.5 1029 45.5
COL.COLO4_15658 Corchorus olitorius HOM05D004666 ORTHO05D005822 1.6e-218 763.8 1016 44.1
Dinv21227 Davidia involucrata HOM05D004666 ORTHO05D005822 2.0e-218 763.5 962 46.2
QL07p039593 Quercus lobata HOM05D004666 ORTHO05D005822 3.5e-218 762.7 968 45.6
Gohir.A07G200500 Gossypium hirsutum HOM05D004666 ORTHO05D005822 5.6e-208 728.8 982 43.1
Gorai.001G233200 Gossypium raimondii HOM05D004666 ORTHO05D005822 1.2e-207 727.6 981 43.1
Rhsim05G0022800 Rhododendron simsii HOM05D004666 ORTHO05D005822 6.4e-204 715.3 1008 43.8
Manes.13G012000 Manihot esculenta HOM05D004666 ORTHO05D005822 4.1e-203 712.6 968 43.6
FvH4_6g18260 Fragaria vesca HOM05D004666 ORTHO05D005822 5.1e-201 705.7 1050 41.5
Gohir.D07G206800 Gossypium hirsutum HOM05D004666 ORTHO05D005822 5.1e-201 705.7 982 42.2
TWI34G1071 Tripterygium wilfordii HOM05D004666 ORTHO05D005822 3.6e-199 699.5 949 43.4
MELO3C009457.2 Cucumis melo HOM05D004666 ORTHO05D005822 1.4e-198 697.6 946 43.9
Sed0022470 Sechium edule HOM05D004666 ORTHO05D005822 4.0e-198 696.0 945 44.7
GSVIVG01032069001 Vitis vinifera HOM05D004666 ORTHO05D005822 4.0e-198 696.0 936 44.3
Thecc.01G223300 Theobroma cacao HOM05D004666 ORTHO05D005822 3.4e-197 693.0 932 43.5
CANSAT54G2995 Cannabis sativa HOM05D004666 ORTHO05D005822 4.9e-196 689.1 949 43.0
RcHm_v2.0_Chr4g0409331 Rosa chinensis HOM05D004666 ORTHO05D005822 1.1e-195 688.0 1087 40.2
Potri.008G200900 Populus trichocarpa HOM05D004666 ORTHO05D005822 7.1e-195 685.3 994 42.1
CsaV3_3G037120 Cucumis sativus L. HOM05D004666 ORTHO05D005822 1.2e-194 684.5 946 42.7
TAR365G1212 Trochodendron aralioides HOM05D004666 ORTHO05D005822 2.7e-194 683.3 973 43.1
EL10Ac7g16949 Beta vulgaris HOM05D004666 ORTHO05D005822 7.8e-194 681.8 1013 41.3
MD09G1081300 Malus domestica HOM05D004666 ORTHO05D005822 6.6e-193 678.7 1001 41.3
Prupe.7G114200 Prunus persica HOM05D004666 ORTHO05D005822 3.3e-192 676.4 1074 40.5
MD12G1022600 Malus domestica HOM05D004666 ORTHO05D005822 9.6e-192 674.9 986 41.7
ClCG10G019140 Citrullus lanatus HOM05D004666 ORTHO05D005822 1.2e-186 657.9 940 42.2
Cc06_g05530 Coffea canephora HOM05D004666 ORTHO05D005822 1.6e-186 657.5 1012 40.8
Lj2C133G10 Lonicera japonica HOM05D004666 ORTHO05D005822 3.9e-185 652.9 1070 39.5
FvH4_7g02500 Fragaria vesca HOM05D004666 ORTHO05D005822 2.8e-183 646.7 1065 38.9
Hund26220 Selenicereus undatus HOM05D004666 ORTHO05D005822 1.2e-181 641.3 1119 39.1
vmacro17219 Vaccinium macrocarpon HOM05D004666 ORTHO05D005822 2.0e-181 640.6 1095 38.4
Nitab4.5_0000794g0050 Nicotiana tabacum HOM05D004666 ORTHO05D005822 4.9e-180 636.0 956 41.0
PSO384G1605 Papaver somniferum HOM05D004666 ORTHO05D005822 1.2e-178 631.3 1063 38.3
PSO425G0050 Papaver somniferum HOM05D004666 ORTHO05D005822 2.7e-178 630.2 1083 37.6
Sp1g17360 Schrenkiella parvula HOM05D004666 ORTHO05D005822 7.9e-178 628.6 918 41.4
Atru.chr8.1588 Acer truncatum HOM05D004666 ORTHO05D005822 1.3e-177 627.9 813 44.2
vmacro22687 Vaccinium macrocarpon HOM05D004666 ORTHO05D005822 3.0e-177 626.7 1104 37.1
BcaB03g12912 Brassica carinata HOM05D004666 ORTHO05D005822 5.6e-176 622.5 938 41.3
AT1G19485 Arabidopsis thaliana HOM05D004666 ORTHO05D005822 2.1e-175 620.5 915 41.0
DCAR_013376 Daucus carota HOM05D004666 ORTHO05D005822 2.1e-175 620.5 942 41.3
PGR142G0825 Punica granatum HOM05D004666 ORTHO05D005822 4.8e-175 619.4 952 41.2
Aqoxy3G00997 Aquilegia oxysepala HOM05D004666 ORTHO05D005822 6.2e-175 619.0 978 39.0
BolC8t49572H Brassica oleracea HOM05D004666 ORTHO05D005822 1.1e-174 618.2 932 41.0
CARHR020050 Cardamine hirsuta HOM05D004666 ORTHO05D005822 1.4e-174 617.8 927 41.0
Thhalv10006802m.g Eutrema salsugineum HOM05D004666 ORTHO05D005822 1.8e-174 617.5 939 40.5
Oeu040521.1 Olea europaea HOM05D004666 ORTHO05D005822 1.8e-174 617.5 908 41.3
A08p29790 Brassica napus HOM05D004666 ORTHO05D005822 2.4e-174 617.1 945 41.1
BraA08t34913Z Brassica rapa HOM05D004666 ORTHO05D005822 3.1e-174 616.7 945 41.1
A06p15660 Brassica napus HOM05D004666 ORTHO05D005822 9.0e-174 615.1 953 40.4
BraA06t24675Z Brassica rapa HOM05D004666 ORTHO05D005822 9.0e-174 615.1 953 40.4
C08p19490 Brassica napus HOM05D004666 ORTHO05D005822 1.5e-173 614.4 929 40.8
Carub.0001s1905 Capsella rubella HOM05D004666 ORTHO05D005822 2.6e-173 613.6 924 41.0
Ah.08g210700 Amaranthus hybridus HOM05D004666 ORTHO05D005822 1.0e-172 611.7 1052 37.2
C05p17890 Brassica napus HOM05D004666 ORTHO05D005822 2.2e-172 610.5 958 40.5
BolC5t30496H Brassica oleracea HOM05D004666 ORTHO05D005822 3.5e-170 603.2 950 40.0
Solyc09g009710.4 Solanum lycopersicum HOM05D004666 ORTHO05D005822 1.9e-168 597.4 1004 38.5
Sopen09g004490 Solanum pennellii HOM05D004666 ORTHO05D005822 2.5e-168 597.0 1001 38.5
AUR62033523 Chenopodium quinoa HOM05D004666 ORTHO05D005822 3.3e-168 596.7 1002 37.2
THA.LOC104827512 Tarenaya hassleriana HOM05D004666 ORTHO05D005822 7.4e-168 595.5 946 39.3
ECA248G3102 Erigeron canadensis HOM05D004666 ORTHO05D005822 2.2e-167 594.0 1060 37.3
TWI73G1120 Tripterygium wilfordii HOM05D004666 ORTHO05D005822 2.2e-167 594.0 942 40.4
Ciclev10011197m.g Citrus clementina HOM05D004666 ORTHO05D005822 2.8e-167 593.6 761 43.5
Aa31LG7G4140 Aethionema arabicum HOM05D004666 ORTHO05D005822 3.7e-167 593.2 939 38.9
FAN06G2408 Fragaria x ananassa HOM05D004666 ORTHO05D005822 3.1e-166 590.1 1062 37.3
Lsat_1_v5_gn_1_48480 Lactuca sativa HOM05D004666 ORTHO05D005822 1.5e-165 587.8 931 40.1
Sed0014063 Sechium edule HOM05D004666 ORTHO05D005822 1.7e-164 584.3 1098 36.5
HanXRQChr01g0029141 Helianthus annuus HOM05D004666 ORTHO05D005822 5.5e-163 579.3 974 38.7
FAN03G3209 Fragaria x ananassa HOM05D004666 ORTHO05D005822 1.6e-162 577.8 1104 35.7
Peaxi162Scf00015g00639 Petunia axillaris HOM05D004666 ORTHO05D005822 7.4e-160 568.9 957 39.5
Nitab4.5_0009916g0020 Nicotiana tabacum HOM05D004666 ORTHO05D005822 1.7e-159 567.8 945 39.8
AL1G32230 Arabidopsis lyrata HOM05D004666 ORTHO05D005822 2.6e-157 560.5 804 42.4
HPP92_015079 Vanilla planifolia HOM05D004666 ORTHO05D005822 1.1e-155 555.1 1192 34.4
FAN02G3237 Fragaria x ananassa HOM05D004666 ORTHO05D005822 2.5e-155 553.9 829 40.8
Haze_19573 Corylus avellana HOM05D004666 ORTHO05D005822 7.9e-154 548.9 754 45.5
ECA248G2596 Erigeron canadensis HOM05D004666 ORTHO05D005822 1.1e-152 545.0 1081 35.1
Sc02g0001000 Simmondsia chinensis HOM05D004666 ORTHO05D005822 1.5e-152 544.7 1015 35.7
SGA_v2.0_scaffold147G36363 Striga asiatica HOM05D004666 ORTHO05D005822 3.7e-151 540.0 914 38.2
RcHm_v2.0_Chr3g0472691 Rosa chinensis HOM05D004666 ORTHO05D005822 5.3e-150 536.2 636 46.2
MBI17_g35786_MAGBIO Magnolia biondii HOM05D004666 ORTHO05D005822 2.9e-148 530.4 919 37.4
Migut.J00966 Erythranthe guttata HOM05D004666 ORTHO05D005822 3.8e-148 530.0 937 36.9
SalBow3G3865 Salvia bowleyana HOM05D004666 ORTHO05D005822 1.4e-145 521.5 945 36.5
Duzib114G0569 Durio zibethinus HOM05D004666 ORTHO05D005822 1.2e-136 491.9 950 36.5
Peaxi162Scf00036g00125 Petunia axillaris HOM05D004666 ORTHO05D005822 4.4e-136 490.0 960 36.9
Nn2g14084 Nelumbo nucifera HOM05D004666 ORTHO05D005822 8.5e-132 475.7 718 39.7
FAN05G5602 Fragaria x ananassa HOM05D004666 ORTHO05D005822 2.8e-127 460.7 830 36.3
Potri.006G036601 Populus trichocarpa HOM05D004666 ORTHO05D005822 4.5e-125 453.4 655 43.1
Sabra08G0160300 Salix brachista HOM05D004666 ORTHO05D005822 1.6e-117 428.3 686 38.8
AUR62028568 Chenopodium quinoa HOM05D004666 ORTHO05D005822 5.6e-115 419.9 817 36.7
unitig_749.g14294 Utricularia gibba HOM05D004666 ORTHO05D005822 4.7e-114 416.8 929 32.8
CDE08G1659 Ceratophyllum demersum HOM05D004666 ORTHO05D005822 6.1e-114 416.4 923 31.3
Sabra12G0045300 Salix brachista HOM05D004666 ORTHO05D005822 1.7e-111 408.3 724 36.9
Zm00001eb147330 Zea mays HOM05D004666 ORTHO05D005822 3.9e-108 397.1 501 42.5
Eucgr.K02035 Eucalyptus grandis HOM05D004666 ORTHO05D005822 1.9e-102 378.3 282 61.7
Os01g0858000 Oryza sativa ssp. japonica HOM05D004666 ORTHO05D005822 8.3e-95 352.8 610 38.0
Pp3c1_31470 Physcomitrium patens HOM05D004666 ORTHO05D005822 3.4e-88 330.9 828 30.1
Mapoly0021s0027 Marchantia polymorpha HOM05D004666 ORTHO05D005822 3.8e-87 327.4 906 27.7
Cpa.g.sc5.49 Carica papaya HOM05D004666 ORTHO05D005822 1.5e-80 305.4 325 48.3
AagrBONN_evm.TU.Sc2ySwM_344.3422 Anthoceros agrestis HOM05D004666 ORTHO05D005822 3.2e-78 297.7 899 27.0
PGSC0003DMG400008959 Solanum tuberosum HOM05D004666 ORTHO05D005822 8.7e-76 289.7 633 34.1
Hma1.2p1_2087F.1_g313760 Hydrangea macrophylla HOM05D004666 ORTHO05D005822 1.3e-60 239.2 294 46.3
FAN05G4874 Fragaria x ananassa HOM05D004666 ORTHO05D005822 7.1e-54 216.9 493 34.1
Haze_16425 Corylus avellana HOM05D004666 ORTHO05D005822 5.7e-51 207.2 309 45.3
Rhsim09G0020300 Rhododendron simsii HOM05D004666 ORTHO05D005822 2.8e-50 204.9 588 30.8
FAN09G1276 Fragaria x ananassa HOM05D004666 ORTHO05D005822 1.3e-47 196.1 245 44.9
RcHm_v2.0_Chr3g0472701 Rosa chinensis HOM05D004666 ORTHO05D005822 1.7e-47 195.7 244 45.9
Cpa.g.c36918 Carica papaya HOM05D004666 ORTHO05D005822 5.0e-47 194.1 221 45.2
ATR0820G266 Amborella trichopoda HOM05D004666 ORTHO05D005822 4.3e-43 181.0 293 36.2
RhsimUnG0189100 Rhododendron simsii HOM05D004666 ORTHO05D005822 6.3e-42 177.2 218 46.3
CBR_g38478 Chara braunii HOM05D004666 ORTHO05D005822 1.1e-41 176.4 710 25.6
ATR0820G291 Amborella trichopoda HOM05D004666 ORTHO05D005822 1.1e-38 166.4 438 28.3
QL03p004438 Quercus lobata HOM05D004666 ORTHO05D005822 1.5e-35 156.0 262 39.7
FAN14G5421 Fragaria x ananassa HOM05D004666 ORTHO05D005822 2.0e-35 155.6 242 39.7
Hma1.2p1_0084F.1_g043500 Hydrangea macrophylla HOM05D004666 ORTHO05D005822 5.7e-35 154.1 380 34.2
Hma1.2p1_0084F.1_g043480 Hydrangea macrophylla HOM05D004666 ORTHO05D005822 1.3e-34 152.9 209 44.0
SEGI_09998 Sequoiadendron giganteum HOM05D004666 ORTHO05D005822 2.2e-34 152.1 131 56.5
Eucgr.L02043 Eucalyptus grandis HOM05D004666 ORTHO05D005822 6.3e-34 150.6 220 41.4
CDE08G0899 Ceratophyllum demersum HOM05D007279 ORTHO05D009212 5.0e-31 141.0 177 41.2
SHI23868 Sapria himalayana HOM05D004666 ORTHO05D005822 1.8e-25 122.5 214 40.2
Hma1.2p1_2087F.1_g313780 Hydrangea macrophylla HOM05D004666 ORTHO05D005822 7.0e-25 120.6 214 35.5
FAN10G4251 Fragaria x ananassa HOM05D004666 ORTHO05D005822 2.6e-24 118.6 547 25.8
QL03p004414 Quercus lobata HOM05D004666 ORTHO05D005822 3.5e-24 118.2 212 40.1
SEGI_32780 Sequoiadendron giganteum HOM05D004666 ORTHO05D005822 5.9e-24 117.5 211 37.9
arahy.Tifrunner.gnm1.ann1.AE8L4W Arachis hypogaea HOM05D004666 ORTHO05D005822 7.2e-22 110.5 140 43.6
CSS0049785 Camellia sinensis var. sinensis HOM05D004666 ORTHO05D005822 1.8e-20 105.9 119 50.4
CDE08G0815 Ceratophyllum demersum HOM05D004666 ORTHO05D005822 2.6e-19 102.1 186 36.0
Hma1.2p1_0084F.1_g043490 Hydrangea macrophylla HOM05D004666 ORTHO05D005822 2.4e-17 95.5 113 46.0
Sabra06G0024800 Salix brachista HOM05D004666 ORTHO05D005822 3.1e-17 95.1 214 32.7
Haze_16424 Corylus avellana HOM05D004666 ORTHO05D005822 3.6e-13 81.6 191 34.0
Os02g0307300 Oryza sativa ssp. japonica HOM05D004666 ORTHO05D005822 4.0e-12 78.2 189 29.1
VMungo0464G1806 Vigna mungo HOM05D009237 ORTHO05D010310 6.8e-12 77.4 60 61.7
QL04p079053 Quercus lobata HOM05D004666 ORTHO05D005822 3.1e-09 68.6 257 24.5
Sabra16G0037300 Salix brachista HOM05D004666 ORTHO05D017783 9.1e-09 67.0 48 60.4
Os07g0454400 Oryza sativa ssp. japonica HOM05D004666 ORTHO05D005822 1.6e-08 66.2 92 41.3
RcHm_v2.0_Chr7g0223981 Rosa chinensis HOM05D004666 ORTHO05D005822 1.1e-06 60.1 51 51.0


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