Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_26654_v3 Cicer arietinum L. HOM05D005679 ORTHO05D007228 7.1e-142 507.3 264 100.0
Psat6g080840 Pisum sativum HOM05D005679 ORTHO05D007228 2.5e-115 419.1 260 82.3
Medtr1g060300 Medicago truncatula HOM05D005679 ORTHO05D007228 2.8e-114 415.6 244 85.7
TPR.G31118 Trifolium pratense HOM05D005679 ORTHO05D007228 2.3e-108 396.0 256 77.7
Lj5g0006681 Lotus japonicus HOM05D005679 ORTHO05D007228 1.5e-102 376.7 259 76.1
arahy.Tifrunner.gnm1.ann1.J82H2E Arachis hypogaea HOM05D005679 ORTHO05D007228 8.2e-98 360.9 250 73.2
arahy.Tifrunner.gnm1.ann1.5KE53F Arachis hypogaea HOM05D005679 ORTHO05D007228 1.6e-96 356.7 237 74.7
Glyma.13G153052 Glycine max HOM05D005679 ORTHO05D007228 1.6e-96 356.7 250 73.2
Lalb_Chr21g0315771 Lupinus albus HOM05D005679 ORTHO05D007228 8.5e-95 350.9 261 72.4
Phvul.007G229100 Phaseolus vulgaris HOM05D005679 ORTHO05D007228 4.7e-93 345.1 241 73.0
VMungo0720G0655 Vigna mungo HOM05D005679 ORTHO05D007228 6.1e-93 344.7 241 72.6
Thecc.05G087100 Theobroma cacao HOM05D005679 ORTHO05D007228 1.4e-81 307.0 258 59.3
TAR633G0672 Trochodendron aralioides HOM05D005679 ORTHO05D007228 7.0e-81 304.7 244 59.8
Hma1.2p1_0536F.1_g174040 Hydrangea macrophylla HOM05D005679 ORTHO05D007228 2.7e-80 302.8 237 63.3
Duzib093G1300 Durio zibethinus HOM05D005679 ORTHO05D007228 4.5e-80 302.0 244 61.5
TWI77G0106 Tripterygium wilfordii HOM05D005679 ORTHO05D007228 5.9e-80 301.6 244 60.7
MD12G1023600 Malus domestica HOM05D005679 ORTHO05D007228 1.0e-79 300.8 237 61.6
Sabra06G0062900 Salix brachista HOM05D005679 ORTHO05D007228 3.8e-79 298.9 237 63.3
CANSAT80G1368 Cannabis sativa HOM05D005679 ORTHO05D007228 2.5e-78 296.2 241 60.6
COL.COLO4_29768 Corchorus olitorius HOM05D005679 ORTHO05D007228 4.3e-78 295.4 244 59.4
Gohir.D04G100800 Gossypium hirsutum HOM05D005679 ORTHO05D007228 1.2e-77 293.9 244 59.8
Potri.006G083300 Populus trichocarpa HOM05D005679 ORTHO05D007228 1.6e-77 293.5 241 61.0
Atru.chr8.1566 Acer truncatum HOM05D005679 ORTHO05D007228 2.1e-77 293.1 233 60.5
Gorai.009G404000 Gossypium raimondii HOM05D005679 ORTHO05D007228 3.6e-77 292.4 244 59.8
MELO3C009462.2 Cucumis melo HOM05D005679 ORTHO05D007228 8.0e-77 291.2 244 60.2
CiPaw.09G012600 Carya illinoinensis HOM05D005679 ORTHO05D007228 1.0e-76 290.8 241 60.2
QL07p039311 Quercus lobata HOM05D005679 ORTHO05D007228 1.0e-76 290.8 241 59.8
Eucgr.A01508 Eucalyptus grandis HOM05D005679 ORTHO05D007228 1.8e-76 290.0 245 62.0
MD14G1020800 Malus domestica HOM05D005679 ORTHO05D007228 3.0e-76 289.3 237 60.8
Glyma.10G071200 Glycine max HOM05D005679 ORTHO05D007228 5.2e-76 288.5 241 63.9
CsaV3_3G037160 Cucumis sativus L. HOM05D005679 ORTHO05D007228 8.9e-76 287.7 244 59.0
ClCG10G019090 Citrullus lanatus HOM05D005679 ORTHO05D007228 1.2e-75 287.3 244 59.8
RcHm_v2.0_Chr3g0472981 Rosa chinensis HOM05D005679 ORTHO05D007228 1.2e-75 287.3 241 61.0
Ciclev10012247m.g Citrus clementina HOM05D005679 ORTHO05D007228 2.6e-75 286.2 245 61.2
Dinv21221 Davidia involucrata HOM05D005679 ORTHO05D007228 2.6e-75 286.2 241 58.9
Rhsim03G0076400 Rhododendron simsii HOM05D005679 ORTHO05D007228 4.4e-75 285.4 244 58.6
Actinidia05440 Actinidia chinensis HOM05D005679 ORTHO05D007228 9.8e-75 284.3 241 59.8
TWI53G0317 Tripterygium wilfordii HOM05D005679 ORTHO05D007228 1.7e-74 283.5 248 58.1
GSVIVG01033827001 Vitis vinifera HOM05D005679 ORTHO05D007228 2.2e-74 283.1 239 59.0
Nn6g34939 Nelumbo nucifera HOM05D005679 ORTHO05D007228 3.7e-74 282.3 237 57.8
Gohir.A04G063700 Gossypium hirsutum HOM05D005679 ORTHO05D007228 6.4e-74 281.6 244 58.2
Sed0004661 Sechium edule HOM05D005679 ORTHO05D007228 1.4e-73 280.4 246 58.1
PGR004G0569 Punica granatum HOM05D005679 ORTHO05D007228 3.2e-73 279.3 244 59.0
FAN05G0675 Fragaria x ananassa HOM05D005679 ORTHO05D007228 4.1e-73 278.9 241 58.5
FAN05G4213 Fragaria x ananassa HOM05D005679 ORTHO05D007228 5.4e-73 278.5 241 58.5
FvH4_6g18450 Fragaria vesca HOM05D005679 ORTHO05D007228 4.6e-72 275.4 241 58.5
FAN14G3109 Fragaria x ananassa HOM05D005679 ORTHO05D007228 4.6e-72 275.4 241 58.5
Manes.09G056451 Manihot esculenta HOM05D005679 ORTHO05D007228 7.8e-72 274.6 253 58.1
Sp4g18530 Schrenkiella parvula HOM05D005679 ORTHO05D007228 1.0e-71 274.2 244 56.6
Migut.J01051 Erythranthe guttata HOM05D005679 ORTHO05D007228 3.0e-71 272.7 237 55.3
vmacro07401 Vaccinium macrocarpon HOM05D005679 ORTHO05D007228 3.0e-71 272.7 267 53.6
Haze_19592 Corylus avellana HOM05D005679 ORTHO05D007228 6.6e-71 271.6 245 60.0
Solyc09g009630.3 Solanum lycopersicum HOM05D005679 ORTHO05D007228 1.1e-70 270.8 237 59.1
Nitab4.5_0001725g0030 Nicotiana tabacum HOM05D005679 ORTHO05D007228 1.5e-70 270.4 245 58.4
TAR636G2700 Trochodendron aralioides HOM05D005679 ORTHO05D007228 1.5e-70 270.4 244 56.6
Sopen09g004390 Solanum pennellii HOM05D005679 ORTHO05D007228 5.6e-70 268.5 237 58.2
Aa31LG5G21440 Aethionema arabicum HOM05D005679 ORTHO05D007228 2.1e-69 266.5 248 58.1
Peaxi162Scf00040g01117 Petunia axillaris HOM05D005679 ORTHO05D007228 3.6e-69 265.8 237 57.8
MSTRG.5837 Avicennia marina HOM05D005679 ORTHO05D007228 4.7e-69 265.4 237 55.3
BcaB01g03852 Brassica carinata HOM05D005679 ORTHO05D007228 4.7e-69 265.4 241 58.9
Thhalv10016950m.g Eutrema salsugineum HOM05D005679 ORTHO05D007228 4.7e-69 265.4 245 56.7
AL4G32420 Arabidopsis lyrata HOM05D005679 ORTHO05D007228 1.8e-68 263.5 244 54.9
A03p20010 Brassica napus HOM05D005679 ORTHO05D007228 1.8e-68 263.5 237 57.8
BraA03t11252Z Brassica rapa HOM05D005679 ORTHO05D007228 1.8e-68 263.5 237 57.8
Carub.0004s1806 Capsella rubella HOM05D005679 ORTHO05D007228 1.8e-68 263.5 237 57.8
BolC3t14741H Brassica oleracea HOM05D005679 ORTHO05D007228 2.3e-68 263.1 238 57.6
Oeu047193.1 Olea europaea HOM05D005679 ORTHO05D007228 2.3e-68 263.1 237 55.7
PGSC0003DMG401002654 Solanum tuberosum HOM05D005679 ORTHO05D007228 3.1e-68 262.7 237 58.2
Sc02g0000910 Simmondsia chinensis HOM05D005679 ORTHO05D007228 4.0e-68 262.3 237 54.0
BcaC01g05669 Brassica carinata HOM05D005679 ORTHO05D007228 5.2e-68 261.9 238 57.6
THA.LOC104807091 Tarenaya hassleriana HOM05D005679 ORTHO05D007228 5.2e-68 261.9 240 56.7
C03p23450 Brassica napus HOM05D005679 ORTHO05D007228 6.8e-68 261.5 244 56.1
HanXRQChr10g0313901 Helianthus annuus HOM05D005679 ORTHO05D007228 6.8e-68 261.5 237 53.6
Lsat_1_v5_gn_1_48041 Lactuca sativa HOM05D005679 ORTHO05D007228 1.2e-67 260.8 239 53.1
PSO339G3946 Papaver somniferum HOM05D005679 ORTHO05D007228 1.2e-67 260.8 254 55.1
SGA_v2.0_scaffold13G06736 Striga asiatica HOM05D005679 ORTHO05D007228 9.8e-67 257.7 225 56.9
FAN02G2684 Fragaria x ananassa HOM05D005679 ORTHO05D007228 2.2e-66 256.5 250 54.8
Cc06_g05640 Coffea canephora HOM05D005679 ORTHO05D007228 2.9e-66 256.1 237 53.6
AT2G36305 Arabidopsis thaliana HOM05D005679 ORTHO05D007228 1.1e-65 254.2 244 52.9
Aqoxy4G02804 Aquilegia oxysepala HOM05D005679 ORTHO05D007228 1.4e-65 253.8 262 52.3
PSO384G2019 Papaver somniferum HOM05D005679 ORTHO05D007228 1.4e-65 253.8 254 52.8
Nitab4.5_0002400g0100 Nicotiana tabacum HOM05D005679 ORTHO05D007228 2.4e-65 253.1 253 54.2
HanXRQChr13g0424691 Helianthus annuus HOM05D005679 ORTHO05D007228 2.0e-64 250.0 225 54.2
HanXRQChr11g0340241 Helianthus annuus HOM05D005679 ORTHO05D007228 7.8e-64 248.1 246 52.4
SHI23954 Sapria himalayana HOM05D005679 ORTHO05D007228 1.3e-63 247.3 247 53.4
ECA248G1272 Erigeron canadensis HOM05D005679 ORTHO05D007228 2.3e-63 246.5 229 53.3
ATR0568G150 Amborella trichopoda HOM05D005679 ORTHO05D007228 3.0e-63 246.1 239 56.1
HPP92_006355 Vanilla planifolia HOM05D005679 ORTHO05D007228 5.8e-59 231.9 238 52.9
unitig_749.g14296 Utricularia gibba HOM05D005679 ORTHO05D007228 2.1e-56 223.4 245 48.2
Ah.08g210640 Amaranthus hybridus HOM05D005679 ORTHO05D007228 2.1e-53 213.4 238 48.3
EL10Ac7g16934 Beta vulgaris HOM05D005679 ORTHO05D007228 4.7e-53 212.2 238 47.1
CSS0002811 Camellia sinensis var. sinensis HOM05D005679 ORTHO05D007228 1.3e-50 204.1 161 63.4
Prupe.7G112900 Prunus persica HOM05D005679 ORTHO05D007228 2.2e-50 203.4 154 63.6
CARHR130580 Cardamine hirsuta HOM05D005679 ORTHO05D007228 2.1e-48 196.8 198 51.0
SEGI_36814 Sequoiadendron giganteum HOM05D005679 ORTHO05D007228 4.6e-48 195.7 225 48.0
CAN.G397.28 Capsicum annuum HOM05D005679 ORTHO05D007228 4.0e-44 182.6 154 60.4
HanXRQChr10g0313981 Helianthus annuus HOM05D005679 ORTHO05D007228 2.6e-43 179.9 189 47.6
Mapoly0066s0044 Marchantia polymorpha HOM05D005679 ORTHO05D007228 5.8e-43 178.7 254 42.5
Pp3c4_17190 Physcomitrium patens HOM05D005679 ORTHO05D007228 5.8e-43 178.7 246 41.5
HanXRQChr10g0314011 Helianthus annuus HOM05D005679 ORTHO05D007228 2.2e-42 176.8 162 53.1
Lj9A526G37 Lonicera japonica HOM05D005679 ORTHO05D007228 2.4e-41 173.3 296 37.8
Lj2A135T55 Lonicera japonica HOM05D005679 ORTHO05D007228 1.5e-38 164.1 182 50.5
Zm00001eb285910 Zea mays HOM05D005679 ORTHO05D007228 2.8e-37 159.8 195 47.2
SMO203G0038 Selaginella moellendorffii HOM05D005679 ORTHO05D007228 1.1e-36 157.9 254 37.8
HanXRQChr10g0314031 Helianthus annuus HOM05D005679 ORTHO05D007228 4.0e-36 156.0 141 53.9
HanXRQChr10g0313891 Helianthus annuus HOM05D005679 ORTHO05D007228 8.4e-34 148.3 161 49.1
Dinv31674 Davidia involucrata HOM05D005679 ORTHO05D007228 1.9e-33 147.1 249 39.0
SMO327G0022 Selaginella moellendorffii HOM05D005679 ORTHO05D007228 3.9e-31 139.4 233 38.2
Os05g0357700 Oryza sativa ssp. japonica HOM05D005679 ORTHO05D007228 6.6e-31 138.7 153 50.3
SalBow3G2040 Salvia bowleyana HOM05D005679 ORTHO05D007228 4.3e-30 136.0 154 46.1
AUR62028550 Chenopodium quinoa HOM05D005679 ORTHO05D007228 9.9e-27 124.8 83 66.3
CDE02G3258 Ceratophyllum demersum HOM05D005679 ORTHO05D007228 4.6e-24 115.9 83 62.7
CBR_g961 Chara braunii HOM05D005679 ORTHO05D007228 1.8e-23 114.0 161 36.6
AagrBONN_evm.TU.Sc2ySwM_228.1072 Anthoceros agrestis HOM05D005679 ORTHO05D007228 3.3e-22 109.8 113 49.6
AUR62028549 Chenopodium quinoa HOM05D005679 ORTHO05D007228 6.2e-21 105.5 169 38.5
AUR62033501 Chenopodium quinoa HOM05D005679 ORTHO05D007228 1.5e-19 100.9 181 37.6
AUR62033502 Chenopodium quinoa HOM05D005679 ORTHO05D007228 4.6e-16 89.4 123 43.9
Sed0012745 Sechium edule HOM05D005679 ORTHO05D007228 1.3e-15 87.8 141 40.4
Actinidia14313 Actinidia chinensis HOM05D005679 ORTHO05D007228 2.3e-15 87.0 204 32.4
Cre01.g042150 Chlamydomonas reinhardtii HOM05D005679 ORTHO05D007228 3.9e-15 86.3 89 47.2
HanXRQChr10g0313971 Helianthus annuus HOM05D005679 ORTHO05D007228 1.7e-10 70.9 100 42.0
MCO10G317 Micromonas commoda HOM05D005679 ORTHO05D007228 2.5e-09 67.0 89 42.7
arahy.Tifrunner.gnm1.ann1.7P1BGF Arachis hypogaea HOM05D005679 ORTHO05D003748 3.2e-09 66.6 37 78.4


User provided reference genes

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