Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_26645_v3 Cicer arietinum L. HOM05D007133 ORTHO05D008954 1.7e-42 175.6 90 100.0
Medtr0512s0010 Medicago truncatula HOM05D007133 ORTHO05D008954 4.7e-37 157.5 88 89.8
TPR.G30180 Trifolium pratense HOM05D007133 ORTHO05D008954 4.4e-35 151.0 88 87.5
Sc10g0000360 Simmondsia chinensis HOM05D007133 ORTHO05D008954 3.9e-31 137.9 86 79.1
arahy.Tifrunner.gnm1.ann1.1B9UE2 Arachis hypogaea HOM05D007133 ORTHO05D008954 1.5e-30 136.0 88 78.4
arahy.Tifrunner.gnm1.ann1.PZX0PK Arachis hypogaea HOM05D007133 ORTHO05D008954 9.5e-30 133.3 88 77.3
CiPaw.14G003100 Carya illinoinensis HOM05D007133 ORTHO05D008954 3.6e-29 131.3 88 72.7
Lalb_Chr04g0263851 Lupinus albus HOM05D007133 ORTHO05D008954 3.6e-29 131.3 88 79.5
Glyma.09G226900 Glycine max HOM05D007133 ORTHO05D008954 6.2e-29 130.6 84 78.6
Glyma.12G009900 Glycine max HOM05D007133 ORTHO05D008954 6.2e-29 130.6 84 78.6
Peaxi162Scf01270g00118 Petunia axillaris HOM05D007133 ORTHO05D008954 4.0e-28 127.9 88 73.9
Lalb_Chr25g0282521 Lupinus albus HOM05D007133 ORTHO05D008954 5.2e-28 127.5 88 75.0
Potri.009G056800 Populus trichocarpa HOM05D007133 ORTHO05D008954 1.2e-27 126.3 89 70.8
CSS0001581 Camellia sinensis var. sinensis HOM05D007133 ORTHO05D008954 1.5e-27 125.9 85 72.9
Gohir.A12G100700 Gossypium hirsutum HOM05D007133 ORTHO05D008954 2.6e-27 125.2 83 75.9
Gohir.D12G103551 Gossypium hirsutum HOM05D007133 ORTHO05D008954 2.6e-27 125.2 83 75.9
Gorai.008G112700 Gossypium raimondii HOM05D007133 ORTHO05D008954 2.6e-27 125.2 83 75.9
Oeu027371.1 Olea europaea HOM05D007133 ORTHO05D008954 2.6e-27 125.2 88 72.7
Lj3g0009786 Lotus japonicus HOM05D007133 ORTHO05D008954 3.4e-27 124.8 88 72.7
Phvul.011G010800 Phaseolus vulgaris HOM05D007133 ORTHO05D008954 3.4e-27 124.8 86 74.4
Dinv03122 Davidia involucrata HOM05D007133 ORTHO05D008954 4.4e-27 124.4 88 71.6
Dinv09308 Davidia involucrata HOM05D007133 ORTHO05D008954 4.4e-27 124.4 88 71.6
PGR031G3629 Punica granatum HOM05D007133 ORTHO05D008954 4.4e-27 124.4 88 71.6
Phvul.001G156100 Phaseolus vulgaris HOM05D007133 ORTHO05D008954 5.8e-27 124.0 86 74.4
Potri.001G262000 Populus trichocarpa HOM05D007133 ORTHO05D008954 5.8e-27 124.0 88 70.5
MD02G1300200 Malus domestica HOM05D007133 ORTHO05D008954 7.5e-27 123.6 86 69.8
Cc02_g28790 Coffea canephora HOM05D007133 ORTHO05D008954 9.9e-27 123.2 86 74.4
Nn7g36332 Nelumbo nucifera HOM05D007133 ORTHO05D008954 1.3e-26 122.9 88 70.5
Actinidia21538 Actinidia chinensis HOM05D007133 ORTHO05D008954 1.7e-26 122.5 88 70.5
Ciclev10033166m.g Citrus clementina HOM05D007133 ORTHO05D008954 1.7e-26 122.5 89 67.4
Duzib268G0834 Durio zibethinus HOM05D007133 ORTHO05D008954 1.7e-26 122.5 83 72.3
COL.COLO4_12337 Corchorus olitorius HOM05D007133 ORTHO05D008954 2.9e-26 121.7 89 68.5
Nitab4.5_0008942g0020 Nicotiana tabacum HOM05D007133 ORTHO05D008954 2.9e-26 121.7 88 71.6
Thecc.01G406600 Theobroma cacao HOM05D007133 ORTHO05D008954 2.9e-26 121.7 84 71.4
Prupe.2G024400 Prunus persica HOM05D007133 ORTHO05D008954 3.7e-26 121.3 90 66.7
vmacro21138 Vaccinium macrocarpon HOM05D007133 ORTHO05D008954 3.7e-26 121.3 88 69.3
EL10Ac2g04374 Beta vulgaris HOM05D007133 ORTHO05D008954 8.3e-26 120.2 86 70.9
Eucgr.G03322 Eucalyptus grandis HOM05D007133 ORTHO05D008954 8.3e-26 120.2 88 70.5
Manes.10G136200 Manihot esculenta HOM05D007133 ORTHO05D008954 8.3e-26 120.2 88 68.2
GSVIVG01032212001 Vitis vinifera HOM05D007133 ORTHO05D008954 8.3e-26 120.2 88 71.6
Sed0015487 Sechium edule HOM05D007133 ORTHO05D008954 1.1e-25 119.8 93 67.7
TWI09G1631 Tripterygium wilfordii HOM05D007133 ORTHO05D008954 1.1e-25 119.8 89 68.5
RcHm_v2.0_Chr1g0318451 Rosa chinensis HOM05D007133 ORTHO05D008954 1.4e-25 119.4 85 69.4
Ah.10g038590 Amaranthus hybridus HOM05D007133 ORTHO05D008954 1.9e-25 119.0 88 69.3
FvH4_7g01820 Fragaria vesca HOM05D007133 ORTHO05D008954 1.9e-25 119.0 88 68.2
FAN01G1667 Fragaria x ananassa HOM05D007133 ORTHO05D008954 1.9e-25 119.0 88 68.2
TWI53G1532 Tripterygium wilfordii HOM05D007133 ORTHO05D008954 1.9e-25 119.0 89 67.4
AUR62023097 Chenopodium quinoa HOM05D007133 ORTHO05D008954 2.4e-25 118.6 90 66.7
Hund26515 Selenicereus undatus HOM05D007133 ORTHO05D008954 2.4e-25 118.6 88 68.2
MD07G1024700 Malus domestica HOM05D007133 ORTHO05D008954 3.2e-25 118.2 84 69.0
Zm00001eb332910 Zea mays HOM05D007133 ORTHO05D008954 4.1e-25 117.9 85 69.4
CsaV3_7G030730 Cucumis sativus L. HOM05D007133 ORTHO05D008954 7.1e-25 117.1 89 66.3
THA.LOC104817576 Tarenaya hassleriana HOM05D007133 ORTHO05D008954 7.1e-25 117.1 89 66.3
Sabra09G0041600 Salix brachista HOM05D007133 ORTHO05D008954 9.2e-25 116.7 89 67.4
SGA_v2.0_scaffold5G02955 Striga asiatica HOM05D007133 ORTHO05D008954 2.1e-24 115.5 88 69.3
TAR633G1269 Trochodendron aralioides HOM05D007133 ORTHO05D008954 2.7e-24 115.2 88 69.3
CANSAT80G0888 Cannabis sativa HOM05D007133 ORTHO05D008954 6.0e-24 114.0 88 64.8
PSO063G0957 Papaver somniferum HOM05D007133 ORTHO05D008954 7.8e-24 113.6 90 65.6
PSO170G5856 Papaver somniferum HOM05D007133 ORTHO05D008954 1.3e-23 112.8 90 65.6
Migut.N01798 Erythranthe guttata HOM05D007133 ORTHO05D008954 2.3e-23 112.1 88 62.5
Lsat_1_v5_gn_1_104961 Lactuca sativa HOM05D007133 ORTHO05D008954 2.3e-23 112.1 90 64.4
ECA248G0684 Erigeron canadensis HOM05D007133 ORTHO05D008954 3.9e-23 111.3 77 68.8
HanXRQChr06g0179721 Helianthus annuus HOM05D007133 ORTHO05D008954 3.9e-23 111.3 83 66.3
Solyc01g087880.3 Solanum lycopersicum HOM05D007133 ORTHO05D008954 3.9e-23 111.3 94 66.0
Sopen01g034810 Solanum pennellii HOM05D007133 ORTHO05D008954 3.9e-23 111.3 94 66.0
Aa31LG10G7080 Aethionema arabicum HOM05D007133 ORTHO05D008954 1.5e-22 109.4 88 63.6
Atru.chr11.2512 Acer truncatum HOM05D007133 ORTHO05D008954 2.5e-22 108.6 77 72.7
MELO3C023583.2 Cucumis melo HOM05D007133 ORTHO05D008954 2.5e-22 108.6 103 57.3
Nitab4.5_0001244g0090 Nicotiana tabacum HOM05D007133 ORTHO05D008954 5.6e-22 107.5 114 55.3
PGSC0003DMG400006836 Solanum tuberosum HOM05D007133 ORTHO05D008954 5.6e-22 107.5 96 64.6
FAN10G0509 Fragaria x ananassa HOM05D007133 ORTHO05D008954 7.3e-22 107.1 86 61.6
SalBow6G3002 Salvia bowleyana HOM05D007133 ORTHO05D008954 9.5e-22 106.7 123 50.4
CDE08G1151 Ceratophyllum demersum HOM05D007133 ORTHO05D008954 1.6e-21 105.9 81 69.1
Aqoxy1G00141 Aquilegia oxysepala HOM05D007133 ORTHO05D008954 2.1e-21 105.5 90 65.6
ClCG09G004410 Citrullus lanatus HOM05D007133 ORTHO05D008954 2.8e-21 105.1 124 49.2
Carub.0005s1836 Capsella rubella HOM05D007133 ORTHO05D008954 4.7e-21 104.4 89 62.9
BcaC06g33378 Brassica carinata HOM05D007133 ORTHO05D008954 6.2e-21 104.0 89 59.6
BcaB01g00452 Brassica carinata HOM05D007133 ORTHO05D008954 8.1e-21 103.6 89 59.6
BcaC06g33021 Brassica carinata HOM05D007133 ORTHO05D008954 8.1e-21 103.6 89 59.6
C07p46740 Brassica napus HOM05D007133 ORTHO05D008954 8.1e-21 103.6 89 59.6
C08p27290 Brassica napus HOM05D007133 ORTHO05D008954 8.1e-21 103.6 89 59.6
BolC7t45192H Brassica oleracea HOM05D007133 ORTHO05D008954 8.1e-21 103.6 89 59.6
BolC8t50346H Brassica oleracea HOM05D007133 ORTHO05D008954 8.1e-21 103.6 89 59.6
A09p45100 Brassica napus HOM05D007133 ORTHO05D008954 1.4e-20 102.8 89 59.6
BraA09t39971Z Brassica rapa HOM05D007133 ORTHO05D008954 1.4e-20 102.8 89 59.6
BraA03t13967Z Brassica rapa HOM05D007133 ORTHO05D008954 1.8e-20 102.4 89 59.6
Thhalv10010861m.g Eutrema salsugineum HOM05D007133 ORTHO05D008954 1.8e-20 102.4 89 60.7
AL5G32580 Arabidopsis lyrata HOM05D007133 ORTHO05D008954 3.1e-20 101.7 89 61.8
AT3G52040 Arabidopsis thaliana HOM05D007133 ORTHO05D008954 3.1e-20 101.7 89 60.7
Eucgr.G03325 Eucalyptus grandis HOM05D007133 ORTHO05D008954 4.0e-20 101.3 82 63.4
Medtr4g101060 Medicago truncatula HOM05D007133 ORTHO05D008954 4.0e-20 101.3 62 79.0
A03p48620 Brassica napus HOM05D007133 ORTHO05D008954 1.2e-19 99.8 89 57.3
CARHR161670 Cardamine hirsuta HOM05D007133 ORTHO05D008954 2.0e-19 99.0 89 59.6
unitig_8.g3622 Utricularia gibba HOM05D007133 ORTHO05D008954 4.4e-19 97.8 73 65.8
Haze_03143 Corylus avellana HOM05D007133 ORTHO05D008954 7.6e-19 97.1 154 42.9
Haze_03146 Corylus avellana HOM05D007133 ORTHO05D008954 7.6e-19 97.1 154 42.9
Cc00_g19310 Coffea canephora HOM05D004771 ORTHO05D005565 1.4e-17 92.8 83 66.3
Psat7g197280 Pisum sativum HOM05D007133 ORTHO05D008954 4.6e-16 87.8 58 77.6
HPP92_001020 Vanilla planifolia HOM05D007133 ORTHO05D008954 8.7e-15 83.6 63 65.1
Dinv09304 Davidia involucrata HOM05D007133 ORTHO05D008954 3.3e-14 81.6 59 69.5
Mapoly0049s0103 Marchantia polymorpha HOM05D007133 ORTHO05D008954 3.6e-13 78.2 89 49.4
AagrBONN_evm.TU.Sc2ySwM_344.2738 Anthoceros agrestis HOM05D007133 ORTHO05D008954 8.1e-13 77.0 89 50.6
MBI19_g09240_MAGBIO Magnolia biondii HOM05D007133 ORTHO05D008954 8.1e-13 77.0 50 74.0
Os01g0271700 Oryza sativa ssp. japonica HOM05D007133 ORTHO05D008954 5.3e-12 74.3 48 72.9
Rhsim01G0126300 Rhododendron simsii HOM05D007133 ORTHO05D008954 9.0e-12 73.6 55 69.1
Duzib133G0944 Durio zibethinus HOM05D007133 ORTHO05D008954 1.2e-11 73.2 48 72.9
Pp3c9_17680 Physcomitrium patens HOM05D007133 ORTHO05D008954 1.2e-11 73.2 77 53.2
QL04p010011 Quercus lobata HOM05D007133 ORTHO05D008954 7.6e-11 70.5 48 70.8
Hma1.2p1_0685F.1_g203210 Hydrangea macrophylla HOM05D007133 ORTHO05D008954 1.7e-10 69.3 49 71.4
Cc00_g26940 Coffea canephora HOM05D007133 ORTHO05D008954 1.9e-09 65.9 54 72.2
Rhsim01G0126100 Rhododendron simsii HOM05D007133 ORTHO05D008954 3.0e-07 58.5 41 68.3


User provided reference genes

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