Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_26636_v3 Cicer arietinum L. HOM05D006245 ORTHO05D007260 2.4e-187 658.7 338 100.0
Psat6g093400 Pisum sativum HOM05D006245 ORTHO05D007260 8.7e-68 261.5 194 72.2
Medtr1g050502 Medicago truncatula HOM05D006245 ORTHO05D007260 1.4e-57 227.6 203 63.5
TPR.G10624 Trifolium pratense HOM05D006245 ORTHO05D007260 1.9e-54 217.2 206 64.6
Lj5g0002209 Lotus japonicus HOM05D006245 ORTHO05D007260 6.3e-50 202.2 193 63.7
arahy.Tifrunner.gnm1.ann1.9KRV5K Arachis hypogaea HOM05D006245 ORTHO05D007260 9.1e-49 198.4 207 58.0
Phvul.007G247600 Phaseolus vulgaris HOM05D006245 ORTHO05D007260 2.2e-47 193.7 216 56.0
Glyma.02G161100 Glycine max HOM05D006245 ORTHO05D007260 1.4e-46 191.0 215 56.7
VMungo0720G1847 Vigna mungo HOM05D006245 ORTHO05D007260 1.4e-46 191.0 338 42.0
arahy.Tifrunner.gnm1.ann1.ZHJ1I0 Arachis hypogaea HOM05D006245 ORTHO05D007260 1.9e-46 190.7 207 57.0
Lalb_Chr19g0129191 Lupinus albus HOM05D006245 ORTHO05D007260 2.6e-43 180.3 214 55.6
CSS0018800 Camellia sinensis var. sinensis HOM05D006245 ORTHO05D007260 1.0e-28 131.7 356 37.4
MD06G1002100 Malus domestica HOM05D006245 ORTHO05D007260 4.4e-27 126.3 187 48.1
Actinidia15551 Actinidia chinensis HOM05D006245 ORTHO05D007260 5.7e-27 125.9 232 44.0
QL02p016022 Quercus lobata HOM05D006245 ORTHO05D007260 7.5e-27 125.6 222 42.3
Prupe.5G003000 Prunus persica HOM05D006245 ORTHO05D007260 2.8e-26 123.6 237 39.7
Ciclev10002005m.g Citrus clementina HOM05D006245 ORTHO05D007260 4.8e-26 122.9 222 39.6
Gorai.009G309200 Gossypium raimondii HOM05D006245 ORTHO05D007260 4.8e-26 122.9 208 43.8
Gorai.012G007100 Gossypium raimondii HOM05D006245 ORTHO05D007260 4.8e-26 122.9 221 43.0
Nn6g31596 Nelumbo nucifera HOM05D006245 ORTHO05D007260 6.3e-26 122.5 248 41.1
Gohir.D04G005900 Gossypium hirsutum HOM05D006245 ORTHO05D007260 8.2e-26 122.1 221 43.0
vmacro21743 Vaccinium macrocarpon HOM05D006245 ORTHO05D007260 8.2e-26 122.1 232 42.2
Dinv05508 Davidia involucrata HOM05D006245 ORTHO05D007260 1.1e-25 121.7 220 42.3
Gohir.D05G292800 Gossypium hirsutum HOM05D006245 ORTHO05D007260 1.1e-25 121.7 208 43.3
Peaxi162Scf00385g00068 Petunia axillaris HOM05D006245 ORTHO05D007260 1.1e-25 121.7 325 35.4
CiPaw.07G131600 Carya illinoinensis HOM05D006245 ORTHO05D007260 1.4e-25 121.3 214 44.4
Haze_22875 Corylus avellana HOM05D006245 ORTHO05D007260 1.8e-25 120.9 226 41.6
CANSAT11G2487 Cannabis sativa HOM05D006245 ORTHO05D007260 3.1e-25 120.2 219 44.7
RcHm_v2.0_Chr7g0217321 Rosa chinensis HOM05D006245 ORTHO05D007260 4.1e-25 119.8 164 48.8
Sed0007375 Sechium edule HOM05D006245 ORTHO05D007260 5.3e-25 119.4 272 39.0
Rhsim06G0001900 Rhododendron simsii HOM05D006245 ORTHO05D007260 1.6e-24 117.9 267 36.7
Manes.18G005000 Manihot esculenta HOM05D006245 ORTHO05D007260 2.7e-24 117.1 225 40.9
Manes.18G001000 Manihot esculenta HOM05D006245 ORTHO05D007260 4.5e-24 116.3 225 40.0
Duzib114G1035 Durio zibethinus HOM05D006245 ORTHO05D007260 5.9e-24 115.9 193 40.9
Gohir.A05G291700 Gossypium hirsutum HOM05D006245 ORTHO05D007260 7.7e-24 115.5 206 40.8
Migut.N02994 Erythranthe guttata HOM05D006245 ORTHO05D007260 1.3e-23 114.8 255 36.9
PGSC0003DMG400010008 Solanum tuberosum HOM05D006245 ORTHO05D007260 1.3e-23 114.8 185 44.3
AUR62035186 Chenopodium quinoa HOM05D006245 ORTHO05D007260 1.7e-23 114.4 240 40.4
Sopen04g036530 Solanum pennellii HOM05D006245 ORTHO05D007260 1.7e-23 114.4 177 46.3
GSVIVG01013443001 Vitis vinifera HOM05D006245 ORTHO05D007260 1.7e-23 114.4 92 68.5
Solyc04g082890.3 Solanum lycopersicum HOM05D006245 ORTHO05D007260 2.9e-23 113.6 177 46.3
CAN.G1330.24 Capsicum annuum HOM05D006245 ORTHO05D007260 6.5e-23 112.5 176 43.8
Sc02g0009330 Simmondsia chinensis HOM05D006245 ORTHO05D007260 6.5e-23 112.5 243 39.5
Cpa.g.sc438.4 Carica papaya HOM05D006245 ORTHO05D007260 8.5e-23 112.1 218 41.3
Cfa014151 Carpinus fangiana HOM05D006245 ORTHO05D007260 8.5e-23 112.1 227 40.5
Migut.O00838 Erythranthe guttata HOM05D006245 ORTHO05D007260 1.1e-22 111.7 242 38.4
Sabra05G0199800 Salix brachista HOM05D006245 ORTHO05D007260 1.1e-22 111.7 231 38.5
AUR62041341 Chenopodium quinoa HOM05D006245 ORTHO05D007260 1.5e-22 111.3 234 39.3
PGR083G2384 Punica granatum HOM05D006245 ORTHO05D007260 1.5e-22 111.3 206 39.3
MSTRG.24524 Avicennia marina HOM05D006245 ORTHO05D007260 1.9e-22 110.9 192 41.7
FvH4_5g26440 Fragaria vesca HOM05D006245 ORTHO05D007260 1.9e-22 110.9 178 45.5
FAN08G3087 Fragaria x ananassa HOM05D006245 ORTHO05D007260 1.9e-22 110.9 178 45.5
FAN13G0213 Fragaria x ananassa HOM05D006245 ORTHO05D007260 1.9e-22 110.9 178 45.5
FAN18G3272 Fragaria x ananassa HOM05D006245 ORTHO05D007260 1.9e-22 110.9 178 45.5
FAN04G2011 Fragaria x ananassa HOM05D006245 ORTHO05D007260 2.5e-22 110.5 182 44.0
CsaV3_4G037700 Cucumis sativus L. HOM05D006245 ORTHO05D007260 3.2e-22 110.2 114 61.4
Oeu042496.1 Olea europaea HOM05D006245 ORTHO05D007260 3.2e-22 110.2 357 32.2
ClCG11G019110 Citrullus lanatus HOM05D006245 ORTHO05D007260 4.2e-22 109.8 115 60.0
TWI56G0455 Tripterygium wilfordii HOM05D006245 ORTHO05D007260 4.2e-22 109.8 169 47.3
DCAR_017622 Daucus carota HOM05D006245 ORTHO05D007260 5.5e-22 109.4 90 72.2
Lsat_1_v5_gn_2_3181 Lactuca sativa HOM05D006245 ORTHO05D007260 5.5e-22 109.4 215 40.0
TAR381G0633 Trochodendron aralioides HOM05D006245 ORTHO05D007260 5.5e-22 109.4 226 40.3
MELO3C017064.2 Cucumis melo HOM05D006245 ORTHO05D007260 9.4e-22 108.6 95 67.4
SalBow6G6430 Salvia bowleyana HOM05D006245 ORTHO05D007260 1.2e-21 108.2 255 38.0
Potri.005G257900 Populus trichocarpa HOM05D006245 ORTHO05D007260 1.6e-21 107.8 238 37.0
Thecc.08G098200 Theobroma cacao HOM05D006245 ORTHO05D007260 1.6e-21 107.8 228 37.7
Duzib106G1614 Durio zibethinus HOM05D006245 ORTHO05D007260 2.1e-21 107.5 169 44.4
Eucgr.F01824 Eucalyptus grandis HOM05D006245 ORTHO05D007260 2.1e-21 107.5 215 40.9
SGA_v2.0_scaffold220G42616 Striga asiatica HOM05D006245 ORTHO05D007260 2.1e-21 107.5 258 35.3
Aqoxy6G03039 Aquilegia oxysepala HOM05D006245 ORTHO05D007260 1.4e-20 104.8 92 66.3
EL10Ac1g01844 Beta vulgaris HOM05D006245 ORTHO05D007260 1.4e-20 104.8 182 42.3
Atru.chr13.34 Acer truncatum HOM05D006245 ORTHO05D007260 1.8e-20 104.4 90 66.7
MSTRG.22076 Avicennia marina HOM05D006245 ORTHO05D007260 1.8e-20 104.4 127 51.2
Os06g0622700 Oryza sativa ssp. japonica HOM05D006245 ORTHO05D007260 1.8e-20 104.4 174 42.5
PSO541G3542 Papaver somniferum HOM05D006245 ORTHO05D007260 1.8e-20 104.4 92 67.4
Hund01813 Selenicereus undatus HOM05D006245 ORTHO05D007260 3.0e-20 103.6 269 36.1
Cc10_g00180 Coffea canephora HOM05D006245 ORTHO05D007260 5.2e-20 102.8 188 43.6
ECA248G0813 Erigeron canadensis HOM05D004589 ORTHO05D005848 5.2e-20 102.8 101 62.4
PSO675G9277 Papaver somniferum HOM05D006245 ORTHO05D007260 2.0e-19 100.9 252 37.3
Aa31LG6G10010 Aethionema arabicum HOM05D006245 ORTHO05D007260 3.4e-19 100.1 93 63.4
Cpa.g.c24967.6 Carica papaya HOM05D006245 ORTHO05D007260 4.4e-19 99.8 170 44.7
Ah.11g042230 Amaranthus hybridus HOM05D006245 ORTHO05D007260 5.7e-19 99.4 87 63.2
PGR031G1027 Punica granatum HOM05D006245 ORTHO05D007260 9.8e-19 98.6 210 39.5
A08p07630 Brassica napus HOM05D006245 ORTHO05D007260 1.7e-18 97.8 92 59.8
BraA08t32777Z Brassica rapa HOM05D006245 ORTHO05D007260 1.7e-18 97.8 92 59.8
BcaC07g37450 Brassica carinata HOM05D006245 ORTHO05D007260 2.8e-18 97.1 92 59.8
C08p09220 Brassica napus HOM05D006245 ORTHO05D007260 2.8e-18 97.1 92 59.8
BolC8t47771H Brassica oleracea HOM05D006245 ORTHO05D007260 2.8e-18 97.1 92 59.8
TWI36G0521 Tripterygium wilfordii HOM05D006245 ORTHO05D007260 2.8e-18 97.1 83 68.7
BcaB04g17767 Brassica carinata HOM05D006245 ORTHO05D007260 4.8e-18 96.3 92 59.8
Eucgr.F03612 Eucalyptus grandis HOM05D006245 ORTHO05D007260 6.3e-18 95.9 226 35.8
Gorai.004G097700 Gossypium raimondii HOM05D006245 ORTHO05D007260 6.3e-18 95.9 157 38.2
Thhalv10004635m.g Eutrema salsugineum HOM05D006245 ORTHO05D007260 8.3e-18 95.5 92 58.7
Sp1g32200 Schrenkiella parvula HOM05D006245 ORTHO05D007260 1.4e-17 94.7 92 58.7
COL.COLO4_03408 Corchorus olitorius HOM05D006245 ORTHO05D007260 1.8e-17 94.4 83 67.5
HanXRQChr14g0427941 Helianthus annuus HOM05D006245 ORTHO05D007260 2.4e-17 94.0 134 51.5
Zm00001eb388050 Zea mays HOM05D006245 ORTHO05D007260 3.1e-17 93.6 155 42.6
DCAR_009857 Daucus carota HOM05D006245 ORTHO05D007260 1.2e-16 91.7 96 59.4
Eucgr.L02193 Eucalyptus grandis HOM05D006245 ORTHO05D007260 1.2e-16 91.7 141 47.5
CARHR035240 Cardamine hirsuta HOM05D006245 ORTHO05D007260 1.6e-16 91.3 196 39.3
CiPaw.08G078200 Carya illinoinensis HOM05D006245 ORTHO05D007260 2.7e-16 90.5 222 37.8
ATR0605G375 Amborella trichopoda HOM05D006245 ORTHO05D007260 7.7e-16 89.0 100 56.0
Gorai.006G220700 Gossypium raimondii HOM05D006245 ORTHO05D007260 7.7e-16 89.0 61 70.5
unitig_8.g4814 Utricularia gibba HOM05D006245 ORTHO05D007260 1.7e-15 87.8 211 35.1
unitig_578.g16243 Utricularia gibba HOM05D006245 ORTHO05D007260 5.0e-15 86.3 164 41.5
Eucgr.G02751 Eucalyptus grandis HOM05D006245 ORTHO05D007260 1.1e-14 85.1 73 61.6
THA.LOC104813184 Tarenaya hassleriana HOM05D006245 ORTHO05D007260 1.5e-14 84.7 84 60.7
AL1G51480 Arabidopsis lyrata HOM05D006245 ORTHO05D007260 1.9e-14 84.3 237 35.9
CDE05G2672 Ceratophyllum demersum HOM05D006245 ORTHO05D007260 2.5e-14 84.0 158 39.9
MBI04_g42540_MAGBIO Magnolia biondii HOM05D006245 ORTHO05D007260 2.5e-14 84.0 235 30.2
AT1G42990 Arabidopsis thaliana HOM05D006245 ORTHO05D007260 7.2e-14 82.4 226 36.7
HPP92_003836 Vanilla planifolia HOM05D006245 ORTHO05D007260 2.1e-13 80.9 166 39.2
Carub.0001s3439 Capsella rubella HOM05D006245 ORTHO05D007260 2.8e-13 80.5 87 57.5
Gohir.D08G092150 Gossypium hirsutum HOM05D006245 ORTHO05D007260 4.7e-13 79.7 50 76.0
Eucgr.F02193 Eucalyptus grandis HOM05D006245 ORTHO05D007260 2.3e-12 77.4 67 64.2
AUR62043321 Chenopodium quinoa HOM05D006245 ORTHO05D007260 1.5e-11 74.7 58 69.0
Gohir.A05G409532 Gossypium hirsutum HOM05D006245 ORTHO05D007260 2.2e-10 70.9 85 56.5
TPR.G31603 Trifolium pratense HOM05D006245 ORTHO05D007260 3.7e-10 70.1 51 78.4
Nitab4.5_0000464g0100 Nicotiana tabacum HOM05D006245 ORTHO05D007260 1.6e-08 64.7 70 57.1
AUR62033078 Chenopodium quinoa HOM05D000408 ORTHO05D001664 2.9e-07 60.5 50 68.0
Actinidia17088 Actinidia chinensis HOM05D001218 ORTHO05D004088 5.6e-06 56.2 48 68.8


User provided reference genes

Program Settings