Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_26612_v3 Cicer arietinum L. HOM05D004846 ORTHO05D005630 6.4e-100 367.5 191 100.0
TPR.G9064 Trifolium pratense HOM05D004846 ORTHO05D005630 1.8e-46 189.9 241 50.2
Psat3g169160 Pisum sativum HOM05D004846 ORTHO05D005630 7.6e-45 184.5 241 50.2
Medtr7g037280 Medicago truncatula HOM05D004846 ORTHO05D005630 1.4e-43 180.3 241 49.0
Glyma.16G063300 Glycine max HOM05D004846 ORTHO05D005630 1.8e-41 173.3 241 47.3
Phvul.008G148206 Phaseolus vulgaris HOM05D004846 ORTHO05D005630 5.1e-41 171.8 241 46.9
Glyma.19G082100 Glycine max HOM05D004846 ORTHO05D005630 8.7e-41 171.0 241 46.9
Lj1g0007607 Lotus japonicus HOM05D004846 ORTHO05D005630 7.4e-40 167.9 241 45.6
Lalb_Chr24g0403411 Lupinus albus HOM05D004846 ORTHO05D005630 7.4e-40 167.9 241 46.9
VMungo1127G0826 Vigna mungo HOM05D004846 ORTHO05D005630 8.2e-39 164.5 241 45.2
arahy.Tifrunner.gnm1.ann1.EI4BFE Arachis hypogaea HOM05D004846 ORTHO05D005630 4.1e-38 162.2 241 44.4
arahy.Tifrunner.gnm1.ann1.QFX8QT Arachis hypogaea HOM05D004846 ORTHO05D005630 4.1e-38 162.2 241 44.4
Ca_30652_v3 Cicer arietinum L. HOM05D004846 ORTHO05D005630 2.0e-32 143.3 80 90.0
CANSAT64G0871 Cannabis sativa HOM05D004846 ORTHO05D005630 2.8e-31 139.4 239 38.1
Atru.chr6.2483 Acer truncatum HOM05D004846 ORTHO05D005630 3.1e-30 136.0 241 38.6
TAR371G0224 Trochodendron aralioides HOM05D004846 ORTHO05D005630 1.5e-29 133.7 241 37.3
CiPaw.03G050100 Carya illinoinensis HOM05D004846 ORTHO05D005630 4.5e-29 132.1 241 37.3
PSO210G2938 Papaver somniferum HOM05D004846 ORTHO05D005630 1.3e-28 130.6 241 35.7
Sed0008655 Sechium edule HOM05D004846 ORTHO05D005630 1.3e-28 130.6 241 36.5
Dinv25698 Davidia involucrata HOM05D004846 ORTHO05D005630 5.0e-28 128.6 240 36.2
MD17G1018500 Malus domestica HOM05D004846 ORTHO05D005630 6.5e-28 128.3 242 36.4
PSO210G2073 Papaver somniferum HOM05D004846 ORTHO05D005630 6.5e-28 128.3 235 36.2
MBI15_g38527_MAGBIO Magnolia biondii HOM05D004846 ORTHO05D005630 1.4e-27 127.1 264 34.5
Sed0014062 Sechium edule HOM05D004846 ORTHO05D005630 1.4e-27 127.1 242 34.7
Sc09g0010530 Simmondsia chinensis HOM05D004846 ORTHO05D005630 2.5e-27 126.3 241 36.9
Manes.15G092600 Manihot esculenta HOM05D004846 ORTHO05D005630 4.2e-27 125.6 241 35.7
GSVIVG01027213001 Vitis vinifera HOM05D004846 ORTHO05D005630 2.1e-26 123.2 241 35.7
Prupe.3G299200 Prunus persica HOM05D004846 ORTHO05D005630 3.6e-26 122.5 241 35.3
MD09G1017700 Malus domestica HOM05D004846 ORTHO05D005630 4.7e-26 122.1 242 34.7
Cfa007283 Carpinus fangiana HOM05D004846 ORTHO05D005630 6.1e-26 121.7 241 34.9
FAN02G3962 Fragaria x ananassa HOM05D004846 ORTHO05D005630 1.0e-25 120.9 241 35.7
QL02p072992 Quercus lobata HOM05D004846 ORTHO05D005630 1.0e-25 120.9 241 35.7
Dinv00597 Davidia involucrata HOM05D004846 ORTHO05D005630 1.8e-25 120.2 240 34.2
Haze_14810 Corylus avellana HOM05D004846 ORTHO05D005630 2.3e-25 119.8 242 34.7
FvH4_6g52480 Fragaria vesca HOM05D004846 ORTHO05D005630 3.0e-25 119.4 241 35.3
FAN05G3122 Fragaria x ananassa HOM05D004846 ORTHO05D005630 3.0e-25 119.4 241 34.9
FAN14G2722 Fragaria x ananassa HOM05D004846 ORTHO05D005630 3.0e-25 119.4 241 35.3
Potri.001G338000 Populus trichocarpa HOM05D004846 ORTHO05D005630 8.8e-25 117.9 240 34.6
Sabra16G0218700 Salix brachista HOM05D004846 ORTHO05D005630 8.8e-25 117.9 240 34.6
ATR0751G144 Amborella trichopoda HOM05D004846 ORTHO05D005630 1.1e-24 117.5 242 33.9
Lsat_1_v5_gn_5_21981 Lactuca sativa HOM05D004846 ORTHO05D005630 3.3e-24 115.9 241 32.4
ClCG05G017040 Citrullus lanatus HOM05D004846 ORTHO05D005630 4.4e-24 115.5 241 33.6
CsaV3_3G046520 Cucumis sativus L. HOM05D004846 ORTHO05D005630 5.7e-24 115.2 241 33.2
CSS0030635 Camellia sinensis var. sinensis HOM05D004846 ORTHO05D005630 9.7e-24 114.4 241 33.6
Ciclev10014098m.g Citrus clementina HOM05D004846 ORTHO05D005630 9.7e-24 114.4 241 35.7
HanXRQChr07g0193151 Helianthus annuus HOM05D004846 ORTHO05D005630 9.7e-24 114.4 241 33.6
THA.LOC104805347 Tarenaya hassleriana HOM05D004846 ORTHO05D005630 1.7e-23 113.6 241 34.9
TWI15G0720 Tripterygium wilfordii HOM05D004846 ORTHO05D005630 1.7e-23 113.6 248 34.7
Actinidia05946 Actinidia chinensis HOM05D004846 ORTHO05D005630 2.2e-23 113.2 241 33.6
RcHm_v2.0_Chr2g0174121 Rosa chinensis HOM05D004846 ORTHO05D005630 2.2e-23 113.2 241 34.0
Cpa.g.sc130.45 Carica papaya HOM05D004846 ORTHO05D005630 3.7e-23 112.5 223 36.3
MELO3C003688.2 Cucumis melo HOM05D004846 ORTHO05D005630 8.2e-23 111.3 241 32.4
Nitab4.5_0001863g0210 Nicotiana tabacum HOM05D004846 ORTHO05D005630 1.1e-22 110.9 240 32.9
HPP92_021915 Vanilla planifolia HOM05D004846 ORTHO05D005630 1.1e-22 110.9 180 35.6
A06p41290 Brassica napus HOM05D004846 ORTHO05D005630 1.8e-22 110.2 240 33.8
BraA06t27054Z Brassica rapa HOM05D004846 ORTHO05D005630 1.8e-22 110.2 240 33.8
ECA233G5463 Erigeron canadensis HOM05D004846 ORTHO05D005630 4.1e-22 109.0 241 32.0
PGSC0003DMG403020229 Solanum tuberosum HOM05D004846 ORTHO05D005630 9.1e-22 107.8 240 32.9
EL10Ac2g04126 Beta vulgaris HOM05D004846 ORTHO05D005630 1.6e-21 107.1 241 32.0
Cc07_g00370 Coffea canephora HOM05D004846 ORTHO05D005630 2.0e-21 106.7 234 33.8
AUR62012470 Chenopodium quinoa HOM05D004846 ORTHO05D005630 2.6e-21 106.3 242 31.8
Rhsim10G0011500 Rhododendron simsii HOM05D004846 ORTHO05D005630 5.9e-21 105.1 255 31.8
Sopen02g038410 Solanum pennellii HOM05D004846 ORTHO05D005630 7.7e-21 104.8 240 32.5
Hund19592 Selenicereus undatus HOM05D004846 ORTHO05D005630 1.0e-20 104.4 241 32.8
Nn7g36106 Nelumbo nucifera HOM05D004846 ORTHO05D005630 1.3e-20 104.0 83 62.7
BcaC06g33832 Brassica carinata HOM05D004846 ORTHO05D005630 1.7e-20 103.6 240 32.1
C07p36370 Brassica napus HOM05D004846 ORTHO05D005630 1.7e-20 103.6 240 32.1
BolC7t44153H Brassica oleracea HOM05D004846 ORTHO05D005630 1.7e-20 103.6 240 32.1
Solyc02g093770.3 Solanum lycopersicum HOM05D004846 ORTHO05D005630 1.7e-20 103.6 240 32.5
Ah.10g035510 Amaranthus hybridus HOM05D004846 ORTHO05D005630 2.9e-20 102.8 242 32.2
Eucgr.J02281 Eucalyptus grandis HOM05D004846 ORTHO05D005630 2.9e-20 102.8 245 32.7
Lj3C906G17 Lonicera japonica HOM05D004846 ORTHO05D005630 2.9e-20 102.8 243 30.5
Sp2g16490 Schrenkiella parvula HOM05D004846 ORTHO05D005630 3.8e-20 102.4 240 30.8
Carub.0005s0560 Capsella rubella HOM05D004846 ORTHO05D005630 6.5e-20 101.7 240 31.7
Aa31LG2G5360 Aethionema arabicum HOM05D004846 ORTHO05D005630 1.1e-19 100.9 240 31.2
BolC2t11469H Brassica oleracea HOM05D004846 ORTHO05D005630 1.5e-19 100.5 222 34.2
Peaxi162Scf00420g00255 Petunia axillaris HOM05D004846 ORTHO05D005630 1.5e-19 100.5 231 32.9
SGA_v2.0_scaffold66G22277 Striga asiatica HOM05D004846 ORTHO05D005630 1.9e-19 100.1 241 28.6
AUR62031596 Chenopodium quinoa HOM05D004846 ORTHO05D005630 2.5e-19 99.8 242 30.6
Thhalv10003555m.g Eutrema salsugineum HOM05D004846 ORTHO05D005630 2.5e-19 99.8 240 30.4
DCAR_013672 Daucus carota HOM05D004846 ORTHO05D005630 3.2e-19 99.4 240 32.9
C02p54070 Brassica napus HOM05D004846 ORTHO05D005630 4.2e-19 99.0 240 32.1
CAN.G473.55 Capsicum annuum HOM05D004846 ORTHO05D005630 5.5e-19 98.6 240 31.7
Duzib187G0011 Durio zibethinus HOM05D004846 ORTHO05D005630 1.2e-18 97.4 240 33.3
SGA_v2.0_scaffold135G34938 Striga asiatica HOM05D004846 ORTHO05D005630 1.2e-18 97.4 241 28.2
Thecc.04G024900 Theobroma cacao HOM05D004846 ORTHO05D005630 1.6e-18 97.1 240 32.9
HanXRQChr02g0054051 Helianthus annuus HOM05D004846 ORTHO05D005630 3.6e-18 95.9 81 54.3
SEGI_08787 Sequoiadendron giganteum HOM05D004846 ORTHO05D005630 8.0e-18 94.7 82 56.1
Hma1.2p1_0279F.1_g112220 Hydrangea macrophylla HOM05D004846 ORTHO05D005630 1.8e-17 93.6 204 32.4
CDE01G0149 Ceratophyllum demersum HOM05D004846 ORTHO05D005630 4.0e-17 92.4 242 29.8
Migut.H00055 Erythranthe guttata HOM05D004846 ORTHO05D005630 4.0e-17 92.4 241 28.6
BraA02t08536Z Brassica rapa HOM05D004846 ORTHO05D005630 6.7e-17 91.7 80 56.2
SalBow2G2965 Salvia bowleyana HOM05D004846 ORTHO05D005630 6.7e-17 91.7 241 28.2
A02p35330 Brassica napus HOM05D004846 ORTHO05D005630 8.8e-17 91.3 79 57.0
Gohir.D10G085400 Gossypium hirsutum HOM05D004846 ORTHO05D005630 8.8e-17 91.3 240 32.1
AT3G27325 Arabidopsis thaliana HOM05D004846 ORTHO05D005630 2.0e-16 90.1 240 30.0
Gohir.A09G032800 Gossypium hirsutum HOM05D004846 ORTHO05D005630 2.0e-16 90.1 241 29.0
CSS0012369 Camellia sinensis var. sinensis HOM05D003267 ORTHO05D005630 2.6e-16 89.7 83 54.2
CSS0025976 Camellia sinensis var. sinensis HOM05D003267 ORTHO05D005630 2.6e-16 89.7 83 54.2
CSS0029627 Camellia sinensis var. sinensis HOM05D003267 ORTHO05D005630 2.6e-16 89.7 83 54.2
CSS0035603 Camellia sinensis var. sinensis HOM05D003267 ORTHO05D005630 2.6e-16 89.7 83 54.2
CARHR040910 Cardamine hirsuta HOM05D004846 ORTHO05D005630 2.6e-16 89.7 212 30.7
COL.COLO4_29272 Corchorus olitorius HOM05D004846 ORTHO05D005630 4.4e-16 89.0 240 30.8
BcaC06g31008 Brassica carinata HOM05D004846 ORTHO05D005630 5.7e-16 88.6 79 54.4
CSS0003755 Camellia sinensis var. sinensis HOM05D003267 ORTHO05D005630 7.5e-16 88.2 83 53.0
Gohir.D09G032800 Gossypium hirsutum HOM05D004846 ORTHO05D005630 7.5e-16 88.2 245 30.6
Gorai.006G037800 Gossypium raimondii HOM05D004846 ORTHO05D005630 7.5e-16 88.2 245 30.6
CSS0050182 Camellia sinensis var. sinensis HOM05D003267 ORTHO05D005630 1.3e-15 87.4 83 53.0
CDE02G2253 Ceratophyllum demersum HOM05D004846 ORTHO05D005630 1.3e-15 87.4 85 51.8
FAN09G4064 Fragaria x ananassa HOM05D004846 ORTHO05D005630 1.3e-15 87.4 80 52.5
Gorai.011G093300 Gossypium raimondii HOM05D004846 ORTHO05D005630 1.3e-15 87.4 240 31.2
PGR083G2372 Punica granatum HOM05D004846 ORTHO05D005630 1.3e-15 87.4 79 55.7
Gohir.A10G160700 Gossypium hirsutum HOM05D004846 ORTHO05D005630 1.7e-15 87.0 240 30.8
vmacro05920 Vaccinium macrocarpon HOM05D004846 ORTHO05D005630 2.2e-15 86.7 204 32.4
AL5G16590 Arabidopsis lyrata HOM05D004846 ORTHO05D005630 4.8e-15 85.5 240 30.0
Os09g0266400 Oryza sativa ssp. japonica HOM05D004846 ORTHO05D005630 3.1e-14 82.8 237 28.7
PGSC0003DMG402020229 Solanum tuberosum HOM05D004846 ORTHO05D005630 7.0e-14 81.6 79 49.4
Oeu062399.1 Olea europaea HOM05D004846 ORTHO05D005630 1.6e-13 80.5 80 50.0
Mapoly0133s0025 Marchantia polymorpha HOM05D004846 ORTHO05D005630 2.0e-13 80.1 240 23.8
Zm00001eb308720 Zea mays HOM05D004846 ORTHO05D005630 1.3e-12 77.4 237 27.4
Pp3c3_36830 Physcomitrium patens HOM05D004846 ORTHO05D005630 2.2e-12 76.6 241 26.6
MSTRG.24063 Avicennia marina HOM05D004846 ORTHO05D005630 6.5e-12 75.1 238 27.3
Pp3c14_5780 Physcomitrium patens HOM05D004846 ORTHO05D005630 8.5e-12 74.7 242 28.5
Pp3c12_23520 Physcomitrium patens HOM05D004846 ORTHO05D005630 3.6e-10 69.3 240 25.4
unitig_1.g29345 Utricularia gibba HOM05D004846 ORTHO05D005630 1.0e-09 67.8 87 40.2
unitig_747.g22069 Utricularia gibba HOM05D004846 ORTHO05D005630 1.0e-09 67.8 87 40.2
SMO119G0307 Selaginella moellendorffii HOM05D004846 ORTHO05D005630 1.8e-09 67.0 79 44.3
AagrBONN_evm.TU.Sc2ySwM_228.569 Anthoceros agrestis HOM05D004846 ORTHO05D005630 8.8e-09 64.7 239 24.7


User provided reference genes

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