Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_26588_v3 Cicer arietinum L. HOM05D002941 ORTHO05D007802 7.0e-60 233.8 121 100.0
Medtr6g092630 Medicago truncatula HOM05D002941 ORTHO05D007802 1.2e-22 110.2 201 39.8
Lj2g0002582 Lotus japonicus HOM05D002941 ORTHO05D007802 1.3e-21 106.7 202 39.1
TPR.G35490 Trifolium pratense HOM05D002941 ORTHO05D007802 1.3e-21 106.7 201 40.3
Ca_25620_v3 Cicer arietinum L. HOM05D002941 ORTHO05D007802 1.1e-20 103.6 57 91.2
Dinv42310 Davidia involucrata HOM05D002941 ORTHO05D007802 1.4e-20 103.2 57 87.7
Lalb_Chr24g0393791 Lupinus albus HOM05D002941 ORTHO05D007802 2.4e-20 102.4 57 89.5
PGR142G3357 Punica granatum HOM05D002941 ORTHO05D007802 2.4e-20 102.4 57 87.7
CSS0039563 Camellia sinensis var. sinensis HOM05D002941 ORTHO05D007802 3.2e-20 102.1 60 83.3
Duzib187G0758 Durio zibethinus HOM05D002941 ORTHO05D007802 3.2e-20 102.1 57 87.7
Sc14g0000760 Simmondsia chinensis HOM05D002941 ORTHO05D007802 3.2e-20 102.1 58 84.5
arahy.Tifrunner.gnm1.ann1.DY3U4J Arachis hypogaea HOM05D002941 ORTHO05D007802 4.1e-20 101.7 91 64.8
arahy.Tifrunner.gnm1.ann1.W9L9K2 Arachis hypogaea HOM05D002941 ORTHO05D007802 4.1e-20 101.7 91 64.8
Prupe.7G211700 Prunus persica HOM05D002941 ORTHO05D007802 5.4e-20 101.3 91 63.7
Ah.01g022630 Amaranthus hybridus HOM05D000128 ORTHO05D000059 7.0e-20 100.9 57 86.0
AUR62010087 Chenopodium quinoa HOM05D000128 ORTHO05D000059 7.0e-20 100.9 57 86.0
AUR62013083 Chenopodium quinoa HOM05D000128 ORTHO05D000059 7.0e-20 100.9 57 86.0
Rhsim05G0022400 Rhododendron simsii HOM05D002941 ORTHO05D007802 7.0e-20 100.9 57 86.0
Thecc.09G091200 Theobroma cacao HOM05D002941 ORTHO05D007802 7.0e-20 100.9 57 86.0
Aa31LG2G20930 Aethionema arabicum HOM05D002941 ORTHO05D007802 1.2e-19 100.1 59 83.1
ClCG11G001810 Citrullus lanatus HOM05D002941 ORTHO05D007802 1.2e-19 100.1 57 84.2
MELO3C004620.2 Cucumis melo HOM05D002941 ORTHO05D007802 1.2e-19 100.1 57 84.2
QL02p062882 Quercus lobata HOM05D002941 ORTHO05D007802 1.2e-19 100.1 60 78.3
Sed0001210 Sechium edule HOM05D002941 ORTHO05D007802 1.2e-19 100.1 57 84.2
GSVIVG01015217001 Vitis vinifera HOM05D002941 ORTHO05D007802 1.2e-19 100.1 57 86.0
CSS0033517 Camellia sinensis var. sinensis HOM05D002941 ORTHO05D007802 1.6e-19 99.8 57 84.2
CSS0046192 Camellia sinensis var. sinensis HOM05D002941 ORTHO05D007802 1.6e-19 99.8 57 84.2
CsaV3_2G001520 Cucumis sativus L. HOM05D002941 ORTHO05D007802 1.6e-19 99.8 57 84.2
MBI01_g01251_MAGBIO Magnolia biondii HOM05D002941 ORTHO05D007802 1.6e-19 99.8 57 82.5
VMungo0464G0681 Vigna mungo HOM05D002941 ORTHO05D007802 1.6e-19 99.8 91 63.7
BolC7t46171H Brassica oleracea HOM05D002941 ORTHO05D007802 2.0e-19 99.4 57 84.2
C07p56950 Brassica napus HOM05D002941 ORTHO05D007802 2.7e-19 99.0 57 82.5
Thhalv10025782m.g Eutrema salsugineum HOM05D002941 ORTHO05D007802 2.7e-19 99.0 57 82.5
Os01g0712600 Oryza sativa ssp. japonica HOM05D002941 ORTHO05D007802 2.7e-19 99.0 57 84.2
TAR626G1518 Trochodendron aralioides HOM05D002941 ORTHO05D007802 2.7e-19 99.0 57 84.2
vmacro17223 Vaccinium macrocarpon HOM05D002941 ORTHO05D007802 2.7e-19 99.0 57 84.2
COL.COLO4_18214 Corchorus olitorius HOM05D002941 ORTHO05D007802 3.5e-19 98.6 57 86.0
Psat1g050240 Pisum sativum HOM05D002941 ORTHO05D007802 3.5e-19 98.6 57 82.5
Zm00001eb361350 Zea mays HOM05D002941 ORTHO05D007802 3.5e-19 98.6 59 81.4
BcaNung00480 Brassica carinata HOM05D002941 ORTHO05D007802 4.6e-19 98.2 57 84.2
Cc06_g11270 Coffea canephora HOM05D002941 ORTHO05D007802 4.6e-19 98.2 57 82.5
Glyma.01G002902 Glycine max HOM05D002941 ORTHO05D007802 4.6e-19 98.2 57 86.0
EL10Ac9g21433 Beta vulgaris HOM05D002941 ORTHO05D007802 7.8e-19 97.4 57 82.5
Cpa.g.sc885.1 Carica papaya HOM05D002941 ORTHO05D007802 7.8e-19 97.4 57 82.5
Cfa003102 Carpinus fangiana HOM05D002941 ORTHO05D007802 7.8e-19 97.4 91 62.6
Haze_25898 Corylus avellana HOM05D002941 ORTHO05D007802 7.8e-19 97.4 91 62.6
FvH4_1g07220 Fragaria vesca HOM05D002941 ORTHO05D007802 7.8e-19 97.4 92 59.8
AL7G22790 Arabidopsis lyrata HOM05D002941 ORTHO05D007802 1.0e-18 97.1 57 80.7
Carub.0007s1097 Capsella rubella HOM05D002941 ORTHO05D007802 1.0e-18 97.1 57 80.7
ECA236G2030 Erigeron canadensis HOM05D002941 ORTHO05D007802 1.0e-18 97.1 59 79.7
FAN26G2201 Fragaria x ananassa HOM05D002941 ORTHO05D007802 1.0e-18 97.1 91 60.4
FAN26G2531 Fragaria x ananassa HOM05D002941 ORTHO05D007802 1.0e-18 97.1 91 60.4
FAN28G1853 Fragaria x ananassa HOM05D002941 ORTHO05D007802 1.0e-18 97.1 91 60.4
Manes.03G032700 Manihot esculenta HOM05D002941 ORTHO05D007802 1.0e-18 97.1 57 82.5
Sp7g27410 Schrenkiella parvula HOM05D002941 ORTHO05D007802 1.0e-18 97.1 59 78.0
C07p56990 Brassica napus HOM05D002941 ORTHO05D007802 1.3e-18 96.7 57 82.5
Gohir.D06G070400 Gossypium hirsutum HOM05D002941 ORTHO05D007802 1.3e-18 96.7 57 84.2
Gorai.010G082100 Gossypium raimondii HOM05D002941 ORTHO05D007802 1.3e-18 96.7 57 84.2
HanXRQChr04g0126271 Helianthus annuus HOM05D002941 ORTHO05D007802 1.3e-18 96.7 59 78.0
PSO063G2718 Papaver somniferum HOM05D002941 ORTHO05D007802 1.3e-18 96.7 57 80.7
PSO832G3360 Papaver somniferum HOM05D002941 ORTHO05D007802 1.3e-18 96.7 57 80.7
Hund00041 Selenicereus undatus HOM05D002941 ORTHO05D007802 1.3e-18 96.7 57 80.7
THA.LOC104803985 Tarenaya hassleriana HOM05D002941 ORTHO05D007802 1.3e-18 96.7 57 80.7
Atru.BG.1.p Acer truncatum HOM05D002941 ORTHO05D007802 1.7e-18 96.3 57 82.5
A03p58970 Brassica napus HOM05D002941 ORTHO05D007802 1.7e-18 96.3 57 82.5
BraA03t14957Z Brassica rapa HOM05D002941 ORTHO05D007802 1.7e-18 96.3 57 82.5
Eucgr.C00903 Eucalyptus grandis HOM05D002941 ORTHO05D007802 1.7e-18 96.3 57 80.7
Lsat_1_v5_gn_8_87601 Lactuca sativa HOM05D002941 ORTHO05D007802 1.7e-18 96.3 59 78.0
MD15G1205400 Malus domestica HOM05D002941 ORTHO05D007802 1.7e-18 96.3 91 62.6
Actinidia39722 Actinidia chinensis HOM05D002941 ORTHO05D007802 2.3e-18 95.9 57 82.5
Migut.J00598 Erythranthe guttata HOM05D002941 ORTHO05D007802 2.3e-18 95.9 57 80.7
AT4G29590 Arabidopsis thaliana HOM05D002941 ORTHO05D007802 3.0e-18 95.5 57 80.7
MSTRG.19522 Avicennia marina HOM05D002941 ORTHO05D007802 3.0e-18 95.5 57 80.7
FAN23G2602 Fragaria x ananassa HOM05D002941 ORTHO05D007802 3.0e-18 95.5 91 59.3
RcHm_v2.0_Chr2g0093121 Rosa chinensis HOM05D002941 ORTHO05D007802 3.0e-18 95.5 91 59.3
SGA_v2.0_scaffold10G05226 Striga asiatica HOM05D002941 ORTHO05D007802 3.0e-18 95.5 57 80.7
CARHR237420 Cardamine hirsuta HOM05D002941 ORTHO05D007802 3.9e-18 95.1 57 80.7
DCAR_024684 Daucus carota HOM05D002941 ORTHO05D007802 3.9e-18 95.1 57 80.7
Oeu034044.1 Olea europaea HOM05D002941 ORTHO05D007802 3.9e-18 95.1 57 80.7
Phvul.004G171000 Phaseolus vulgaris HOM05D002941 ORTHO05D007802 3.9e-18 95.1 91 62.6
TWI34G1831 Tripterygium wilfordii HOM05D002941 ORTHO05D007802 3.9e-18 95.1 57 80.7
Nn6g35443 Nelumbo nucifera HOM05D002941 ORTHO05D007802 5.0e-18 94.7 57 82.5
Nitab4.5_0010434g0020 Nicotiana tabacum HOM05D002941 ORTHO05D007802 5.0e-18 94.7 57 82.5
ATR0987G003 Amborella trichopoda HOM05D002941 ORTHO05D007802 6.6e-18 94.4 57 80.7
Peaxi162Scf00221g01113 Petunia axillaris HOM05D002941 ORTHO05D007802 6.6e-18 94.4 57 82.5
Pp3c3_17950 Physcomitrium patens HOM05D002941 ORTHO05D007802 6.6e-18 94.4 59 72.9
CAN.G52.1 Capsicum annuum HOM05D002941 ORTHO05D007802 8.6e-18 94.0 57 78.9
Lj4C308T6 Lonicera japonica HOM05D002941 ORTHO05D007802 8.6e-18 94.0 57 77.2
Nitab4.5_0010222g0020 Nicotiana tabacum HOM05D002941 ORTHO05D007802 8.6e-18 94.0 57 80.7
PGSC0003DMG400003266 Solanum tuberosum HOM05D002941 ORTHO05D007802 8.6e-18 94.0 57 80.7
CiPaw.04G151200 Carya illinoinensis HOM05D002941 ORTHO05D007802 1.1e-17 93.6 57 80.7
Ciclev10008994m.g Citrus clementina HOM05D002941 ORTHO05D007802 1.1e-17 93.6 91 58.2
Glyma.07G129200 Glycine max HOM05D002941 ORTHO05D007802 1.1e-17 93.6 57 84.2
Hma1.2p1_0798F.1_g219710 Hydrangea macrophylla HOM05D002941 ORTHO05D007802 1.1e-17 93.6 57 77.2
Aqoxy7G01242 Aquilegia oxysepala HOM05D002941 ORTHO05D007802 1.5e-17 93.2 57 80.7
Potri.006G150500 Populus trichocarpa HOM05D002941 ORTHO05D007802 1.9e-17 92.8 57 77.2
Sabra06G0119200 Salix brachista HOM05D002941 ORTHO05D007802 1.9e-17 92.8 57 78.9
SalBow6G6088 Salvia bowleyana HOM05D002941 ORTHO05D007802 1.9e-17 92.8 57 77.2
HPP92_009131 Vanilla planifolia HOM05D002941 ORTHO05D007802 1.9e-17 92.8 57 78.9
HPP92_009134 Vanilla planifolia HOM05D002941 ORTHO05D007802 1.9e-17 92.8 57 78.9
FAN19G2976 Fragaria x ananassa HOM05D002941 ORTHO05D007802 2.5e-17 92.4 91 58.2
Sopen07g013800 Solanum pennellii HOM05D002941 ORTHO05D007802 5.6e-17 91.3 57 78.9
Solyc07g025520.3 Solanum lycopersicum HOM05D002941 ORTHO05D007802 9.5e-17 90.5 57 78.9
unitig_27.g24729 Utricularia gibba HOM05D002941 ORTHO05D007802 1.2e-16 90.1 57 75.4
SMO141G0088 Selaginella moellendorffii HOM05D002941 ORTHO05D007802 2.1e-16 89.4 57 71.9
FvH4_2g04400 Fragaria vesca HOM05D002941 ORTHO05D007802 4.7e-16 88.2 96 55.2
Nn8g38897 Nelumbo nucifera HOM05D002941 ORTHO05D007802 8.1e-16 87.4 53 79.2
AagrBONN_evm.TU.Sc2ySwM_228.3900 Anthoceros agrestis HOM05D002941 ORTHO05D007802 1.1e-15 87.0 57 73.7
Mapoly0119s0034 Marchantia polymorpha HOM05D002941 ORTHO05D007802 1.4e-15 86.7 57 68.4
MCO03G392 Micromonas commoda HOM05D002941 ORTHO05D007802 3.1e-15 85.5 57 64.9
Cre06.g278236 Chlamydomonas reinhardtii HOM05D002941 ORTHO05D007802 2.0e-14 82.8 56 67.9
PRCOL_00006451 Prasinoderma coloniale HOM05D002941 ORTHO05D007802 1.7e-13 79.7 57 64.9
PRCOL_00001733 Prasinoderma coloniale HOM05D002941 ORTHO05D007802 6.4e-13 77.8 54 66.7
Actinidia29795 Actinidia chinensis HOM05D002941 ORTHO05D007802 3.2e-12 75.5 58 69.0
MD02G1076700 Malus domestica HOM05D002941 ORTHO05D007802 7.3e-09 64.3 35 88.6
PRCOL_00004756 Prasinoderma coloniale HOM05D002941 ORTHO05D009287 3.4e-06 55.5 51 52.9
Lj1g0007362 Lotus japonicus HOM05D002941 ORTHO05D007802 9.9e-06 53.9 92 39.1


User provided reference genes

Program Settings