Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_26337_v3 Cicer arietinum L. HOM05D002956 ORTHO05D009000 1.9e-156 555.8 282 100.0
Medtr3g437110 Medicago truncatula HOM05D002956 ORTHO05D009000 4.8e-120 434.9 275 81.8
TPR.G11887 Trifolium pratense HOM05D002956 ORTHO05D009000 5.7e-105 384.8 239 81.6
Lalb_Chr15g0078501 Lupinus albus HOM05D002956 ORTHO05D009000 5.0e-101 371.7 294 68.7
Glyma.08G154600 Glycine max HOM05D002956 ORTHO05D009000 2.5e-100 369.4 298 66.4
Phvul.005G020500 Phaseolus vulgaris HOM05D002956 ORTHO05D009000 5.2e-98 361.7 281 68.0
Lj6g0021242 Lotus japonicus HOM05D002956 ORTHO05D009000 8.2e-96 354.4 276 68.1
Glyma.15G273500 Glycine max HOM05D002956 ORTHO05D009000 1.4e-95 353.6 296 65.9
VMungo1080G0193 Vigna mungo HOM05D002956 ORTHO05D009000 1.2e-94 350.5 281 66.9
arahy.Tifrunner.gnm1.ann1.NKUQ81 Arachis hypogaea HOM05D002956 ORTHO05D009000 8.0e-83 311.2 286 60.5
arahy.Tifrunner.gnm1.ann1.UED96S Arachis hypogaea HOM05D002956 ORTHO05D009000 4.9e-80 302.0 286 59.4
Dinv04582 Davidia involucrata HOM05D000102 ORTHO05D000138 1.6e-78 297.0 266 59.4
CSS0047298 Camellia sinensis var. sinensis HOM05D002956 ORTHO05D009000 2.7e-78 296.2 263 59.7
Potri.009G068300 Populus trichocarpa HOM05D002956 ORTHO05D009000 1.4e-74 283.9 285 53.3
Atru.chr3.2859 Acer truncatum HOM05D002956 ORTHO05D009000 6.8e-74 281.6 276 53.6
TAR633G2508 Trochodendron aralioides HOM05D002956 ORTHO05D009000 6.8e-74 281.6 199 71.4
QL01p016676 Quercus lobata HOM05D002956 ORTHO05D009000 1.2e-73 280.8 280 56.1
Aqoxy2G00440 Aquilegia oxysepala HOM05D002956 ORTHO05D009000 3.4e-73 279.3 243 62.1
Cfa009899 Carpinus fangiana HOM05D002956 ORTHO05D009000 3.4e-73 279.3 268 57.1
CANSAT54G2237 Cannabis sativa HOM05D002956 ORTHO05D009000 1.7e-72 276.9 212 65.6
Actinidia06979 Actinidia chinensis HOM05D002956 ORTHO05D009000 2.9e-72 276.2 274 55.1
Hma1.2p1_0460F.1_g157580 Hydrangea macrophylla HOM05D002956 ORTHO05D009000 2.9e-72 276.2 268 55.6
Manes.02G137000 Manihot esculenta HOM05D002956 ORTHO05D009000 1.1e-71 274.2 211 64.5
Thecc.09G246200 Theobroma cacao HOM05D002956 ORTHO05D009000 7.0e-71 271.6 260 57.7
Cpa.g.sc34.182 Carica papaya HOM05D002956 ORTHO05D009000 3.5e-70 269.2 266 56.8
MD00G1134800 Malus domestica HOM05D002956 ORTHO05D009000 4.6e-70 268.9 254 59.1
PSO339G4249 Papaver somniferum HOM05D002956 ORTHO05D009000 5.9e-70 268.5 213 65.7
MBI19_g19212_MAGBIO Magnolia biondii HOM05D002956 ORTHO05D009000 7.8e-70 268.1 200 68.0
PSO384G3893 Papaver somniferum HOM05D002956 ORTHO05D009000 7.8e-70 268.1 202 66.8
RcHm_v2.0_Chr5g0050271 Rosa chinensis HOM05D002956 ORTHO05D009000 1.0e-69 267.7 257 56.4
AUR62000215 Chenopodium quinoa HOM05D002956 ORTHO05D009000 1.7e-69 266.9 257 58.4
Sabra09G0051400 Salix brachista HOM05D002956 ORTHO05D009000 2.9e-69 266.2 263 54.8
CsaV3_6G038840 Cucumis sativus L. HOM05D002956 ORTHO05D009000 1.1e-68 264.2 248 56.0
MD00G1148000 Malus domestica HOM05D002956 ORTHO05D009000 1.1e-68 264.2 273 54.2
GSVIVG01037339001 Vitis vinifera HOM05D002956 ORTHO05D009000 1.1e-68 264.2 163 76.1
FAN27G0310 Fragaria x ananassa HOM05D002956 ORTHO05D009000 1.9e-68 263.5 240 57.5
PGR102G2739 Punica granatum HOM05D002956 ORTHO05D009000 1.9e-68 263.5 263 56.7
CDE08G0764 Ceratophyllum demersum HOM05D002956 ORTHO05D009000 3.3e-68 262.7 257 54.5
FvH4_2g35650 Fragaria vesca HOM05D002956 ORTHO05D009000 3.3e-68 262.7 242 57.4
MELO3C014549.2 Cucumis melo HOM05D002956 ORTHO05D009000 5.6e-68 261.9 273 53.8
FAN22G1360 Fragaria x ananassa HOM05D002956 ORTHO05D009000 5.6e-68 261.9 240 57.5
AUR62006560 Chenopodium quinoa HOM05D002956 ORTHO05D009000 7.3e-68 261.5 252 57.1
Cc01_g06260 Coffea canephora HOM05D002956 ORTHO05D009000 7.3e-68 261.5 277 52.7
TWI31G1447 Tripterygium wilfordii HOM05D002956 ORTHO05D009000 9.5e-68 261.2 266 53.8
Duzib150G0064 Durio zibethinus HOM05D002956 ORTHO05D009000 1.6e-67 260.4 263 54.8
FAN20G2737 Fragaria x ananassa HOM05D002956 ORTHO05D009000 1.6e-67 260.4 245 56.3
ATR0307G004 Amborella trichopoda HOM05D002956 ORTHO05D009000 2.1e-67 260.0 206 62.1
Ciclev10016188m.g Citrus clementina HOM05D002956 ORTHO05D009000 2.8e-67 259.6 195 64.1
Aa31LG5G8950 Aethionema arabicum HOM05D002956 ORTHO05D009000 8.0e-67 258.1 274 52.6
MSTRG.17638 Avicennia marina HOM05D002956 ORTHO05D009000 1.8e-66 256.9 225 60.4
unitig_8.g3652 Utricularia gibba HOM05D002956 ORTHO05D009000 3.1e-66 256.1 276 50.7
Ah.06g194750 Amaranthus hybridus HOM05D002956 ORTHO05D009000 4.0e-66 255.8 265 54.3
EL10Ac4g10093 Beta vulgaris HOM05D002956 ORTHO05D009000 4.0e-66 255.8 276 51.4
Sc16g0010930 Simmondsia chinensis HOM05D002956 ORTHO05D009000 4.0e-66 255.8 267 55.8
Eucgr.B03751 Eucalyptus grandis HOM05D002956 ORTHO05D009000 1.2e-65 254.2 198 66.2
HPP92_025063 Vanilla planifolia HOM05D002956 ORTHO05D009000 3.4e-65 252.7 208 63.5
FAN15G3287 Fragaria x ananassa HOM05D002956 ORTHO05D009000 4.4e-65 252.3 245 55.5
Gohir.A05G073600 Gossypium hirsutum HOM05D002956 ORTHO05D009000 5.8e-65 251.9 251 55.0
Migut.N02380 Erythranthe guttata HOM05D002956 ORTHO05D009000 9.8e-65 251.1 219 62.1
Migut.D00676 Erythranthe guttata HOM05D002956 ORTHO05D009000 1.7e-64 250.4 194 63.9
Gohir.D05G076500 Gossypium hirsutum HOM05D002956 ORTHO05D009000 1.7e-64 250.4 251 54.6
Gorai.009G077800 Gossypium raimondii HOM05D002956 ORTHO05D009000 1.7e-64 250.4 251 54.6
Lsat_1_v5_gn_5_63121 Lactuca sativa HOM05D002956 ORTHO05D009000 3.7e-64 249.2 223 58.3
Haze_23260 Corylus avellana HOM05D002956 ORTHO05D009000 8.3e-64 248.1 337 46.9
HanXRQChr12g0380431 Helianthus annuus HOM05D002956 ORTHO05D009000 1.4e-63 247.3 195 62.1
Oeu027216.2 Olea europaea HOM05D002956 ORTHO05D009000 2.4e-63 246.5 202 61.9
Solyc01g008700.4 Solanum lycopersicum HOM05D002956 ORTHO05D009000 3.2e-63 246.1 265 52.5
THA.LOC104826457 Tarenaya hassleriana HOM05D002956 ORTHO05D009000 9.2e-63 244.6 262 51.1
SGA_v2.0_scaffold29G12222 Striga asiatica HOM05D002956 ORTHO05D009000 2.7e-62 243.0 200 63.0
Sopen01g004220 Solanum pennellii HOM05D002956 ORTHO05D009000 6.0e-62 241.9 262 52.3
BcaC01g04913 Brassica carinata HOM05D002956 ORTHO05D008031 1.0e-61 241.1 225 56.9
BolC3t15559H Brassica oleracea HOM05D002956 ORTHO05D008031 1.0e-61 241.1 225 56.9
ECA233G2896 Erigeron canadensis HOM05D000003 ORTHO05D009000 1.0e-61 241.1 175 66.9
PGSC0003DMG400004431 Solanum tuberosum HOM05D002956 ORTHO05D009000 1.3e-61 240.7 220 58.6
C03p32170 Brassica napus HOM05D002956 ORTHO05D008031 3.0e-61 239.6 225 56.4
DCAR_006895 Daucus carota HOM05D002956 ORTHO05D009000 8.6e-61 238.0 246 54.5
SalBow6G2483 Salvia bowleyana HOM05D002956 ORTHO05D009000 1.5e-60 237.3 221 57.5
Thhalv10002070m.g Eutrema salsugineum HOM05D002956 ORTHO05D009000 1.9e-60 236.9 233 55.8
A03p26830 Brassica napus HOM05D002956 ORTHO05D008031 2.5e-60 236.5 228 54.8
BraA03t11895Z Brassica rapa HOM05D002956 ORTHO05D008031 2.5e-60 236.5 220 56.4
BcaB01g03033 Brassica carinata HOM05D002956 ORTHO05D008031 4.3e-60 235.7 227 55.5
Psat5g240480 Pisum sativum HOM05D002956 ORTHO05D009000 4.3e-60 235.7 176 72.2
Peaxi162Scf00032g02025 Petunia axillaris HOM05D002956 ORTHO05D009000 7.3e-60 235.0 253 53.0
Thhalv10002099m.g Eutrema salsugineum HOM05D002956 ORTHO05D009000 2.1e-59 233.4 178 65.7
Carub.0004s0731 Capsella rubella HOM05D002956 ORTHO05D009000 1.8e-58 230.3 246 52.0
AL4G20050 Arabidopsis lyrata HOM05D002956 ORTHO05D009000 3.4e-57 226.1 243 51.0
Nitab4.5_0000390g0150 Nicotiana tabacum HOM05D002956 ORTHO05D009000 1.2e-54 217.6 195 57.4
Rhsim13G0206200 Rhododendron simsii HOM05D002956 ORTHO05D009000 1.5e-52 210.7 414 37.0
AT2G26840 Arabidopsis thaliana HOM05D002956 ORTHO05D009000 4.0e-50 202.6 296 41.2
ClCG02G022720 Citrullus lanatus HOM05D002956 ORTHO05D009000 2.0e-49 200.3 262 50.0
Zm00001eb128680 Zea mays HOM05D002956 ORTHO05D009000 2.6e-49 199.9 197 52.8
Sp4g08630 Schrenkiella parvula HOM05D002956 ORTHO05D009000 7.6e-49 198.4 200 52.0
Os01g0268900 Oryza sativa ssp. japonica HOM05D002956 ORTHO05D009000 9.9e-49 198.0 197 54.3
Mapoly0206s0003 Marchantia polymorpha HOM05D002956 ORTHO05D009000 4.1e-47 192.6 158 57.0
Pp3c23_20070 Physcomitrium patens HOM05D002956 ORTHO05D009000 2.5e-44 183.3 187 49.2
CBR_g32285 Chara braunii HOM05D002956 ORTHO05D009000 2.1e-43 180.3 158 54.4
Nn7g36832 Nelumbo nucifera HOM05D002956 ORTHO05D009000 3.1e-42 176.4 284 41.9
SMO367G0391 Selaginella moellendorffii HOM05D002956 ORTHO05D009000 1.2e-41 174.5 205 45.4
Duzib168G2273 Durio zibethinus HOM05D002956 ORTHO05D009000 1.7e-40 170.6 163 54.6
CiPaw.14G111100 Carya illinoinensis HOM05D002956 ORTHO05D009000 1.1e-39 167.9 196 49.5
COL.COLO4_07383 Corchorus olitorius HOM05D002956 ORTHO05D009000 9.0e-34 148.3 267 41.6
AL5G21910 Arabidopsis lyrata HOM05D002956 ORTHO05D009000 9.9e-33 144.8 200 40.5
Psat5g184640 Pisum sativum HOM05D002956 ORTHO05D009000 3.8e-32 142.9 115 70.4
Nitab4.5_0006687g0020 Nicotiana tabacum HOM05D002956 ORTHO05D009000 7.9e-30 135.2 83 75.9
AagrBONN_evm.TU.Sc2ySwM_228.3484 Anthoceros agrestis HOM05D002956 ORTHO05D009000 1.6e-27 127.5 124 54.8
CiPaw.13G148600 Carya illinoinensis HOM05D002956 ORTHO05D009000 6.9e-26 122.1 182 44.0
MCO16G644 Micromonas commoda HOM05D002956 ORTHO05D009000 3.8e-24 116.3 159 41.5
Sed0027603 Sechium edule HOM05D002956 ORTHO05D009000 2.4e-23 113.6 157 44.6
Nitab4.5_0006687g0010 Nicotiana tabacum HOM05D002956 ORTHO05D000001 9.3e-23 111.7 183 38.3
Prupe.4G260500 Prunus persica HOM05D002956 ORTHO05D009000 2.7e-22 110.2 105 54.3
AT3G43910 Arabidopsis thaliana HOM05D002956 ORTHO05D009000 6.0e-22 109.0 167 39.5
CARHR119020 Cardamine hirsuta HOM05D002956 ORTHO05D009000 1.5e-17 94.4 152 40.1
Cre04.g218000 Chlamydomonas reinhardtii HOM05D002956 ORTHO05D009000 3.1e-10 70.1 99 40.4
CARHR035850 Cardamine hirsuta HOM05D002956 ORTHO05D009000 4.5e-09 66.2 76 53.9
PRCOL_00003518 Prasinoderma coloniale HOM05D002956 ORTHO05D009000 1.7e-08 64.3 61 55.7
CARHR035860 Cardamine hirsuta HOM05D002956 ORTHO05D009000 1.1e-07 61.6 66 42.4


User provided reference genes

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