Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_26327_v3 Cicer arietinum L. HOM05D005159 ORTHO05D006237 1.1e-132 476.9 289 100.0
Medtr4g051625 Medicago truncatula HOM05D005159 ORTHO05D006237 1.1e-84 317.4 378 57.4
TPR.G37714 Trifolium pratense HOM05D005159 ORTHO05D006237 1.3e-83 313.9 293 61.8
Phvul.008G006700 Phaseolus vulgaris HOM05D005159 ORTHO05D006237 1.5e-81 307.0 290 62.1
Glyma.07G204700 Glycine max HOM05D005159 ORTHO05D006237 5.0e-80 302.0 294 61.6
Ca_13657_v3 Cicer arietinum L. HOM05D005159 ORTHO05D006237 2.5e-79 299.7 213 76.1
Psat7g186040 Pisum sativum HOM05D002527 ORTHO05D002865 9.4e-79 297.7 321 55.8
Medtr8g085800 Medicago truncatula HOM05D005159 ORTHO05D006237 1.4e-74 283.9 335 53.1
VMungo1383G3720 Vigna mungo HOM05D005159 ORTHO05D006237 9.4e-71 271.2 292 54.5
Lj6g0020881 Lotus japonicus HOM05D005159 ORTHO05D006237 1.2e-70 270.8 292 60.3
TPR.G28602 Trifolium pratense HOM05D005159 ORTHO05D006237 2.1e-70 270.0 183 75.4
arahy.Tifrunner.gnm1.ann1.MEN3PN Arachis hypogaea HOM05D005159 ORTHO05D006237 2.6e-68 263.1 290 59.0
Phvul.001G061500 Phaseolus vulgaris HOM05D005159 ORTHO05D006237 1.1e-66 257.7 290 57.2
arahy.Tifrunner.gnm1.ann1.VE7QKQ Arachis hypogaea HOM05D005159 ORTHO05D006237 6.5e-64 248.4 290 54.8
Medtr1g090650 Medicago truncatula HOM05D005159 ORTHO05D006237 7.5e-60 235.0 172 72.7
GSVIVG01036491001 Vitis vinifera HOM05D005159 ORTHO05D006237 7.0e-58 228.4 213 54.9
Psat6g166480 Pisum sativum HOM05D005159 ORTHO05D006237 9.1e-58 228.0 167 74.9
Ciclev10012260m.g Citrus clementina HOM05D005159 ORTHO05D006237 1.2e-57 227.6 181 63.0
Potri.017G108700 Populus trichocarpa HOM05D005159 ORTHO05D006237 1.6e-57 227.3 210 59.0
Prupe.3G244000 Prunus persica HOM05D005159 ORTHO05D006237 1.6e-57 227.3 151 72.8
CANSAT21G0179 Cannabis sativa HOM05D005159 ORTHO05D006237 2.0e-57 226.9 165 69.7
Sabra04G0075100 Salix brachista HOM05D005159 ORTHO05D006237 5.9e-57 225.3 220 56.4
Lalb_Chr18g0059201 Lupinus albus HOM05D005159 ORTHO05D006237 1.7e-56 223.8 219 58.4
Dinv33896 Davidia involucrata HOM05D005159 ORTHO05D006237 2.9e-56 223.0 165 69.7
Manes.01G106500 Manihot esculenta HOM05D005159 ORTHO05D006237 2.9e-56 223.0 220 55.9
Lju237A1T66 Lonicera japonica HOM05D005159 ORTHO05D006237 1.5e-55 220.7 158 69.6
TWI32G0838 Tripterygium wilfordii HOM05D005159 ORTHO05D006237 1.5e-55 220.7 221 57.0
Glyma.13G171200 Glycine max HOM05D005159 ORTHO05D006237 2.5e-55 219.9 134 80.6
Cpa.g.sc70.15 Carica papaya HOM05D005159 ORTHO05D006237 4.2e-55 219.2 222 55.0
Sopen03g009860 Solanum pennellii HOM05D005159 ORTHO05D006237 4.2e-55 219.2 161 67.7
PGSC0003DMG400018775 Solanum tuberosum HOM05D005159 ORTHO05D006237 5.5e-55 218.8 161 67.7
SGA_v2.0_scaffold10G05141 Striga asiatica HOM05D005159 ORTHO05D006237 5.5e-55 218.8 217 54.4
Eucgr.I02096 Eucalyptus grandis HOM05D005159 ORTHO05D006237 7.2e-55 218.4 193 61.1
Migut.K00872 Erythranthe guttata HOM05D005159 ORTHO05D006237 9.4e-55 218.0 163 67.5
MSTRG.15424 Avicennia marina HOM05D005159 ORTHO05D006237 1.6e-54 217.2 184 62.5
Peaxi162Scf00479g00439 Petunia axillaris HOM05D005159 ORTHO05D006237 1.6e-54 217.2 184 63.0
CAN.G497.25 Capsicum annuum HOM05D005159 ORTHO05D006237 2.1e-54 216.9 159 67.3
Potri.004G106900 Populus trichocarpa HOM05D005159 ORTHO05D006237 3.6e-54 216.1 214 56.1
PGSC0003DMG400010100 Solanum tuberosum HOM05D005159 ORTHO05D006237 4.7e-54 215.7 161 66.5
CsaV3_5G013180 Cucumis sativus L. HOM05D005159 ORTHO05D006237 6.1e-54 215.3 186 59.7
Sed0024356 Sechium edule HOM05D005159 ORTHO05D006237 6.1e-54 215.3 211 54.5
MELO3C020033.2 Cucumis melo HOM05D005159 ORTHO05D006237 8.0e-54 214.9 186 59.7
Sed0002827 Sechium edule HOM05D005159 ORTHO05D006237 1.0e-53 214.5 180 61.1
Solyc03g046350.3 Solanum lycopersicum HOM05D005159 ORTHO05D006237 2.3e-53 213.4 215 53.0
THA.LOC104805544 Tarenaya hassleriana HOM05D005159 ORTHO05D006237 2.3e-53 213.4 189 60.8
Peaxi162Scf01056g00019 Petunia axillaris HOM05D005159 ORTHO05D006237 6.8e-53 211.8 159 65.4
PGR004G1892 Punica granatum HOM05D005159 ORTHO05D006237 6.8e-53 211.8 168 62.5
MD09G1079700 Malus domestica HOM05D005159 ORTHO05D006237 8.8e-53 211.5 152 71.1
MD17G1070200 Malus domestica HOM05D005159 ORTHO05D006237 1.2e-52 211.1 152 70.4
Solyc02g089600.3 Solanum lycopersicum HOM05D005159 ORTHO05D006237 2.0e-52 210.3 159 66.0
Nn1g09575 Nelumbo nucifera HOM05D005159 ORTHO05D006237 3.4e-52 209.5 179 62.0
Nitab4.5_0001982g0030 Nicotiana tabacum HOM05D005159 ORTHO05D006237 5.7e-52 208.8 182 58.8
DCAR_026285 Daucus carota HOM05D005159 ORTHO05D006237 9.8e-52 208.0 154 68.2
Gohir.A13G118100 Gossypium hirsutum HOM05D005159 ORTHO05D006237 1.3e-51 207.6 198 59.6
Gorai.013G136600 Gossypium raimondii HOM05D005159 ORTHO05D006237 1.3e-51 207.6 204 57.8
Cc08_g12050 Coffea canephora HOM05D005159 ORTHO05D006237 1.7e-51 207.2 157 63.7
Nitab4.5_0006224g0050 Nicotiana tabacum HOM05D005159 ORTHO05D006237 2.2e-51 206.8 172 62.2
Gohir.D13G121900 Gossypium hirsutum HOM05D005159 ORTHO05D006237 2.8e-51 206.5 204 57.8
Thecc.04G145900 Theobroma cacao HOM05D005159 ORTHO05D006237 3.7e-51 206.1 158 65.2
Actinidia18107 Actinidia chinensis HOM05D005159 ORTHO05D006237 4.8e-51 205.7 186 59.1
ClCG11G001130 Citrullus lanatus HOM05D005159 ORTHO05D006237 4.8e-51 205.7 186 57.0
Hund27686 Selenicereus undatus HOM05D005159 ORTHO05D006237 4.8e-51 205.7 217 54.4
Hund27687 Selenicereus undatus HOM05D005159 ORTHO05D006237 4.8e-51 205.7 217 54.4
SalBow1G7987 Salvia bowleyana HOM05D005159 ORTHO05D006237 1.1e-50 204.5 215 53.0
Aa31LG9G16930 Aethionema arabicum HOM05D005159 ORTHO05D006237 1.4e-50 204.1 214 54.7
MBI15_g18197_MAGBIO Magnolia biondii HOM05D005159 ORTHO05D006237 1.8e-50 203.8 197 55.3
Duzib211G0079 Durio zibethinus HOM05D005159 ORTHO05D006237 3.1e-50 203.0 179 60.9
CDE01G0131 Ceratophyllum demersum HOM05D005159 ORTHO05D006237 5.4e-50 202.2 176 58.5
BcaB06g27239 Brassica carinata HOM05D005159 ORTHO05D006237 9.1e-50 201.4 209 53.6
Sc10g0001500 Simmondsia chinensis HOM05D005159 ORTHO05D006237 1.2e-49 201.1 196 55.1
Oeu062202.1 Olea europaea HOM05D005159 ORTHO05D006237 1.6e-49 200.7 145 66.9
BcaC02g09665 Brassica carinata HOM05D005159 ORTHO05D006237 2.0e-49 200.3 150 65.3
C04p45340 Brassica napus HOM05D005159 ORTHO05D006237 2.0e-49 200.3 150 65.3
BolC4t26116H Brassica oleracea HOM05D005159 ORTHO05D006237 2.0e-49 200.3 150 65.3
BraA04t16828Z Brassica rapa HOM05D005159 ORTHO05D006237 2.0e-49 200.3 150 65.3
AL7G51700 Arabidopsis lyrata HOM05D005159 ORTHO05D006237 3.5e-49 199.5 199 55.3
A04p11610 Brassica napus HOM05D005159 ORTHO05D006237 5.9e-49 198.7 151 64.2
unitig_61.g26382 Utricularia gibba HOM05D005159 ORTHO05D006237 5.9e-49 198.7 144 67.4
FvH4_6g45790 Fragaria vesca HOM05D005159 ORTHO05D006237 1.3e-48 197.6 162 61.1
FAN09G0042 Fragaria x ananassa HOM05D005159 ORTHO05D006237 1.3e-48 197.6 162 61.1
CiPaw.03G007500 Carya illinoinensis HOM05D005159 ORTHO05D006237 1.7e-48 197.2 211 54.0
PSO017G6426 Papaver somniferum HOM05D005159 ORTHO05D006237 2.3e-48 196.8 154 63.6
AT5G38720 Arabidopsis thaliana HOM05D005159 ORTHO05D006237 3.8e-48 196.1 200 52.0
Sp7g03200 Schrenkiella parvula HOM05D005159 ORTHO05D006237 3.8e-48 196.1 213 49.3
Thhalv10028147m.g Eutrema salsugineum HOM05D005159 ORTHO05D006237 6.6e-48 195.3 212 54.2
Atru.chr11.1725 Acer truncatum HOM05D005159 ORTHO05D006237 1.5e-47 194.1 132 70.5
Carub.0007s3714 Capsella rubella HOM05D005159 ORTHO05D006237 1.9e-47 193.7 161 59.0
MBI15_g38433_MAGBIO Magnolia biondii HOM05D005159 ORTHO05D006237 1.9e-47 193.7 197 53.3
PSO478G0642 Papaver somniferum HOM05D005159 ORTHO05D006237 4.2e-47 192.6 156 62.8
Actinidia36292 Actinidia chinensis HOM05D005159 ORTHO05D006237 9.5e-47 191.4 132 70.5
ECA240G3626 Erigeron canadensis HOM05D005159 ORTHO05D006237 8.0e-46 188.3 171 59.1
QL02p054338 Quercus lobata HOM05D005159 ORTHO05D006237 8.0e-46 188.3 163 60.1
HPP92_015315 Vanilla planifolia HOM05D005159 ORTHO05D006237 8.0e-46 188.3 200 51.0
CDE02G0002 Ceratophyllum demersum HOM05D005159 ORTHO05D006237 2.3e-45 186.8 134 67.2
AUR62016605 Chenopodium quinoa HOM05D005159 ORTHO05D006237 4.0e-45 186.0 195 52.8
Ah.08g217340 Amaranthus hybridus HOM05D005159 ORTHO05D006237 1.2e-44 184.5 154 59.7
Rhsim08G0081100 Rhododendron simsii HOM05D005159 ORTHO05D006237 1.5e-44 184.1 180 60.0
EL10Ac7g16490 Beta vulgaris HOM05D005159 ORTHO05D006237 2.0e-44 183.7 203 50.7
HanXRQChr03g0078031 Helianthus annuus HOM05D005159 ORTHO05D006237 2.0e-44 183.7 173 56.1
Aqoxy3G00614 Aquilegia oxysepala HOM05D005159 ORTHO05D006237 2.6e-44 183.3 183 57.9
FAN02G2008 Fragaria x ananassa HOM05D005159 ORTHO05D006237 2.6e-44 183.3 141 63.8
C06p18340 Brassica napus HOM05D005159 ORTHO05D006237 3.4e-44 183.0 211 51.2
BolC6t37046H Brassica oleracea HOM05D005159 ORTHO05D006237 3.4e-44 183.0 211 51.2
FAN05G5180 Fragaria x ananassa HOM05D005159 ORTHO05D006237 7.5e-44 181.8 165 57.6
RcHm_v2.0_Chr2g0163971 Rosa chinensis HOM05D005159 ORTHO05D006237 9.8e-44 181.4 135 65.2
Ah.15g094970 Amaranthus hybridus HOM05D005159 ORTHO05D006237 1.4e-42 177.6 196 50.5
Lsat_1_v5_gn_8_24161 Lactuca sativa HOM05D005159 ORTHO05D006237 7.0e-42 175.3 166 56.0
CSS0007706 Camellia sinensis var. sinensis HOM05D005159 ORTHO05D006237 9.2e-42 174.9 155 59.4
CSS0044288 Camellia sinensis var. sinensis HOM05D005159 ORTHO05D006237 9.2e-42 174.9 155 59.4
Os02g0728700 Oryza sativa ssp. japonica HOM05D005159 ORTHO05D006237 9.2e-42 174.9 205 48.8
TAR371G0967 Trochodendron aralioides HOM05D005159 ORTHO05D006237 9.2e-42 174.9 162 56.8
CSS0013880 Camellia sinensis var. sinensis HOM05D005159 ORTHO05D006237 1.2e-41 174.5 153 59.5
vmacro18090 Vaccinium macrocarpon HOM05D005159 ORTHO05D006237 2.9e-40 169.9 184 57.6
Sopen02g034320 Solanum pennellii HOM05D005159 ORTHO05D006237 3.9e-40 169.5 199 48.7
AUR62011452 Chenopodium quinoa HOM05D005159 ORTHO05D006237 7.3e-39 165.2 252 41.3
ATR0691G244 Amborella trichopoda HOM05D005159 ORTHO05D006237 9.5e-39 164.9 150 56.0
BcaC08g44401 Brassica carinata HOM05D005159 ORTHO05D006237 1.2e-38 164.5 136 63.2
Zm00001eb253420 Zea mays HOM05D005159 ORTHO05D006237 1.6e-38 164.1 219 44.7
SEGI_21798 Sequoiadendron giganteum HOM05D005159 ORTHO05D006237 6.1e-38 162.2 132 62.1
AUR62026768 Chenopodium quinoa HOM05D005159 ORTHO05D006237 1.8e-37 160.6 131 60.3
Nn8g41096 Nelumbo nucifera HOM05D005159 ORTHO05D006237 2.3e-37 160.2 178 51.7
arahy.Tifrunner.gnm1.ann1.3J3UL0 Arachis hypogaea HOM05D005159 ORTHO05D006237 3.1e-37 159.8 136 62.5
COL.COLO4_37042 Corchorus olitorius HOM05D005159 ORTHO05D006237 6.8e-37 158.7 154 53.2
TAR629G0318 Trochodendron aralioides HOM05D005159 ORTHO05D006237 6.8e-37 158.7 163 54.6
CSS0028445 Camellia sinensis var. sinensis HOM05D005159 ORTHO05D006237 2.3e-32 143.7 153 53.6
Haze_14082 Corylus avellana HOM05D005159 ORTHO05D006237 2.3e-32 143.7 237 38.4
CARHR291790 Cardamine hirsuta HOM05D005159 ORTHO05D006237 1.2e-30 137.9 144 52.1
Mapoly0058s0026 Marchantia polymorpha HOM05D005159 ORTHO05D006237 1.4e-29 134.4 134 48.5
Pp3c10_24110 Physcomitrium patens HOM05D005159 ORTHO05D006237 3.1e-29 133.3 137 51.8
FAN14G1445 Fragaria x ananassa HOM05D005159 ORTHO05D006237 2.0e-28 130.6 100 66.0
TAR629G0746 Trochodendron aralioides HOM05D005159 ORTHO05D006237 3.2e-26 123.2 124 51.6
SMO196G0176 Selaginella moellendorffii HOM05D005159 ORTHO05D006237 7.1e-26 122.1 153 44.4
Lj7A7T32 Lonicera japonica HOM05D005159 ORTHO05D006237 2.7e-25 120.2 179 39.1
AUR62013504 Chenopodium quinoa HOM05D000258 ORTHO05D006237 1.5e-20 104.4 88 58.0
CBR_g4867 Chara braunii HOM05D005159 ORTHO05D006237 7.6e-20 102.1 137 42.3
SMO234G0023 Selaginella moellendorffii HOM05D005159 ORTHO05D006237 2.4e-18 97.1 106 45.3
Medtr8g085830 Medicago truncatula HOM05D005159 ORTHO05D006237 4.1e-18 96.3 100 58.0
MCO13G254 Micromonas commoda HOM05D005159 ORTHO05D006237 2.1e-17 94.0 133 37.6
arahy.Tifrunner.gnm1.ann1.YDKP0V Arachis hypogaea HOM05D005159 ORTHO05D006237 3.6e-14 83.2 81 55.6
AagrBONN_evm.TU.Sc2ySwM_369.363 Anthoceros agrestis HOM05D005159 ORTHO05D006237 4.7e-14 82.8 169 34.9
Cre01.g052200 Chlamydomonas reinhardtii HOM05D005159 ORTHO05D006237 5.8e-12 75.9 140 35.7
QL06p007211 Quercus lobata HOM05D005159 ORTHO05D006237 5.8e-12 75.9 57 63.2
Oeu062205.1 Olea europaea HOM05D005159 ORTHO05D006237 1.4e-10 71.2 83 45.8
CBR_g52693 Chara braunii HOM05D005159 ORTHO05D006237 4.2e-10 69.7 136 30.9


User provided reference genes

Program Settings