Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_26314_v3 Cicer arietinum L. HOM05D005261 ORTHO05D006180 1.1e-178 629.8 311 100.0
TPR.G16249 Trifolium pratense HOM05D005261 ORTHO05D006180 1.7e-163 579.3 324 89.2
Medtr2g460880 Medicago truncatula HOM05D005261 ORTHO05D006180 2.2e-158 562.4 305 90.5
Psat5g135960 Pisum sativum HOM05D005261 ORTHO05D006180 3.5e-156 555.1 322 86.3
VMungo1309G2277 Vigna mungo HOM05D005261 ORTHO05D006180 1.4e-152 543.1 306 86.9
Phvul.009G027100 Phaseolus vulgaris HOM05D005261 ORTHO05D006180 4.0e-152 541.6 304 87.2
Glyma.04G107300 Glycine max HOM05D005261 ORTHO05D006180 4.2e-149 531.6 304 85.5
Lj1g0011675 Lotus japonicus HOM05D005261 ORTHO05D006180 4.2e-149 531.6 304 87.5
Glyma.06G107100 Glycine max HOM05D005261 ORTHO05D006180 1.6e-145 519.6 304 84.2
arahy.Tifrunner.gnm1.ann1.S5D643 Arachis hypogaea HOM05D005261 ORTHO05D006180 8.1e-137 490.7 302 82.1
arahy.Tifrunner.gnm1.ann1.232HHD Arachis hypogaea HOM05D005261 ORTHO05D006180 2.6e-135 485.7 302 81.8
Gorai.010G045400 Gossypium raimondii HOM05D005261 ORTHO05D006180 2.6e-135 485.7 314 75.8
Gohir.D06G040600 Gossypium hirsutum HOM05D005261 ORTHO05D006180 1.3e-134 483.4 318 75.2
Manes.02G212400 Manihot esculenta HOM05D005261 ORTHO05D006180 1.1e-133 480.3 323 74.6
Sed0017821 Sechium edule HOM05D005261 ORTHO05D006180 1.2e-132 476.9 312 76.6
Duzib093G0733 Durio zibethinus HOM05D005261 ORTHO05D006180 2.7e-132 475.7 315 73.7
Prupe.1G509000 Prunus persica HOM05D005261 ORTHO05D006180 4.6e-132 474.9 307 76.5
Cfa015937 Carpinus fangiana HOM05D005261 ORTHO05D006180 6.0e-132 474.6 318 74.8
QL12p035629 Quercus lobata HOM05D005261 ORTHO05D006180 1.8e-131 473.0 322 75.8
GSVIVG01008967001 Vitis vinifera HOM05D005261 ORTHO05D006180 1.8e-131 473.0 313 75.7
MD08G1174900 Malus domestica HOM05D005261 ORTHO05D006180 3.9e-131 471.9 308 76.0
Atru.chr13.1289 Acer truncatum HOM05D005261 ORTHO05D006180 6.7e-131 471.1 320 73.4
CsaV3_2G033630 Cucumis sativus L. HOM05D005261 ORTHO05D006180 6.7e-131 471.1 311 75.9
Sabra02G0072100 Salix brachista HOM05D005261 ORTHO05D006180 6.7e-131 471.1 306 75.5
TWI36G1273 Tripterygium wilfordii HOM05D005261 ORTHO05D006180 6.7e-131 471.1 325 74.5
RcHm_v2.0_Chr7g0240261 Rosa chinensis HOM05D005261 ORTHO05D006180 1.1e-130 470.3 310 75.8
Cpa.g.sc77.98 Carica papaya HOM05D005261 ORTHO05D006180 7.4e-130 467.6 321 74.1
CiPaw.06G023200 Carya illinoinensis HOM05D005261 ORTHO05D006180 1.3e-129 466.8 312 74.7
Ciclev10001407m.g Citrus clementina HOM05D005261 ORTHO05D006180 1.6e-129 466.5 319 73.4
Haze_00548 Corylus avellana HOM05D005261 ORTHO05D006180 2.8e-129 465.7 338 71.0
Dinv44727 Davidia involucrata HOM05D005261 ORTHO05D006180 3.7e-129 465.3 321 73.2
FAN04G2261 Fragaria x ananassa HOM05D005261 ORTHO05D006180 4.8e-129 464.9 314 73.2
MELO3C008135.2 Cucumis melo HOM05D005261 ORTHO05D006180 1.4e-128 463.4 311 74.6
Dinv13059 Davidia involucrata HOM05D005261 ORTHO05D006180 2.4e-128 462.6 318 72.0
FAN08G3477 Fragaria x ananassa HOM05D005261 ORTHO05D006180 2.4e-128 462.6 314 72.9
FvH4_5g38270 Fragaria vesca HOM05D005261 ORTHO05D006180 3.1e-128 462.2 315 73.3
FAN13G1502 Fragaria x ananassa HOM05D005261 ORTHO05D006180 3.1e-128 462.2 314 72.9
Thecc.08G114100 Theobroma cacao HOM05D005261 ORTHO05D006180 1.2e-127 460.3 314 72.3
FAN18G3314 Fragaria x ananassa HOM05D005261 ORTHO05D006180 2.0e-127 459.5 314 72.3
Eucgr.H00927 Eucalyptus grandis HOM05D005261 ORTHO05D006180 2.6e-127 459.1 311 73.3
Actinidia31491 Actinidia chinensis HOM05D005261 ORTHO05D006180 5.8e-127 458.0 323 71.2
ClCG11G007980 Citrullus lanatus HOM05D005261 ORTHO05D006180 5.8e-127 458.0 337 70.3
vmacro04773 Vaccinium macrocarpon HOM05D005261 ORTHO05D006180 7.6e-127 457.6 314 70.7
THA.LOC104813129 Tarenaya hassleriana HOM05D005261 ORTHO05D006180 1.0e-126 457.2 310 73.9
Duzib041G0715 Durio zibethinus HOM05D005261 ORTHO05D006180 2.2e-126 456.1 306 73.5
Ah.03g139490 Amaranthus hybridus HOM05D005261 ORTHO05D006180 3.8e-126 455.3 321 70.7
Hma1.2p1_0276F.1_g111380 Hydrangea macrophylla HOM05D005261 ORTHO05D006180 6.4e-126 454.5 302 72.8
EL10Ac1g01697 Beta vulgaris HOM05D005261 ORTHO05D006180 8.4e-126 454.1 312 71.2
PGR042G1365 Punica granatum HOM05D005261 ORTHO05D006180 1.1e-125 453.8 313 72.8
Rhsim07G0199400 Rhododendron simsii HOM05D005261 ORTHO05D006180 1.1e-125 453.8 311 72.0
Cc10_g05970 Coffea canephora HOM05D005261 ORTHO05D006180 2.5e-125 452.6 318 71.7
HanXRQChr02g0043751 Helianthus annuus HOM05D005261 ORTHO05D006180 2.5e-125 452.6 303 72.9
CANSAT54G1848 Cannabis sativa HOM05D005261 ORTHO05D006180 3.2e-125 452.2 314 73.6
Nitab4.5_0002561g0060 Nicotiana tabacum HOM05D005261 ORTHO05D006180 7.1e-125 451.1 317 71.6
Nitab4.5_0001915g0120 Nicotiana tabacum HOM05D005261 ORTHO05D006180 9.3e-125 450.7 318 71.1
RhsimUnG0073100 Rhododendron simsii HOM05D005261 ORTHO05D006180 9.3e-125 450.7 311 72.0
Sc14g0001090 Simmondsia chinensis HOM05D005261 ORTHO05D006180 1.2e-124 450.3 310 72.3
Aqoxy6G00521 Aquilegia oxysepala HOM05D005261 ORTHO05D006180 2.7e-124 449.1 323 71.2
Nitab4.5_0003428g0020 Nicotiana tabacum HOM05D005261 ORTHO05D006180 2.7e-124 449.1 317 71.0
Thhalv10004311m.g Eutrema salsugineum HOM05D005261 ORTHO05D006180 6.0e-124 448.0 341 66.9
Aa31LG6G9000 Aethionema arabicum HOM05D005261 ORTHO05D006180 1.3e-123 446.8 346 67.1
CAN.G617.12 Capsicum annuum HOM05D005261 ORTHO05D006180 1.3e-123 446.8 316 71.8
CARHR034970 Cardamine hirsuta HOM05D005261 ORTHO05D006180 1.8e-123 446.4 317 70.7
Solyc04g072390.3 Solanum lycopersicum HOM05D005261 ORTHO05D006180 8.7e-123 444.1 316 70.9
Sopen04g028560 Solanum pennellii HOM05D005261 ORTHO05D006180 1.5e-122 443.4 316 71.2
BcaC02g11530 Brassica carinata HOM05D005261 ORTHO05D006180 3.3e-122 442.2 306 71.6
MSTRG.24247 Avicennia marina HOM05D005261 ORTHO05D006180 7.4e-122 441.0 315 69.8
Sp1g30710 Schrenkiella parvula HOM05D005261 ORTHO05D006180 9.6e-122 440.7 342 66.4
C04p14350 Brassica napus HOM05D005261 ORTHO05D006180 6.2e-121 438.0 302 71.9
Gohir.A06G039700 Gossypium hirsutum HOM05D005261 ORTHO05D006180 6.2e-121 438.0 314 70.1
Carub.0001s3363 Capsella rubella HOM05D005261 ORTHO05D006180 8.2e-121 437.6 344 65.4
AT1G36310 Arabidopsis thaliana HOM05D005261 ORTHO05D006180 1.4e-120 436.8 341 66.9
BraA05t20051Z Brassica rapa HOM05D005261 ORTHO05D006180 1.4e-120 436.8 306 71.2
PSO541G3947 Papaver somniferum HOM05D005261 ORTHO05D006180 1.4e-120 436.8 316 69.9
SGA_v2.0_scaffold12G05968 Striga asiatica HOM05D005261 ORTHO05D006180 1.4e-120 436.8 301 71.4
BcaB03g13642 Brassica carinata HOM05D005261 ORTHO05D006180 1.8e-120 436.4 339 66.1
PSO447G0033 Papaver somniferum HOM05D005261 ORTHO05D006180 3.1e-120 435.6 318 69.2
MBI02_g34268_MAGBIO Magnolia biondii HOM05D005261 ORTHO05D006180 4.0e-120 435.3 332 68.1
PSO675G0151 Papaver somniferum HOM05D005261 ORTHO05D006180 6.9e-120 434.5 317 68.5
DCAR_023858 Daucus carota HOM05D005261 ORTHO05D006180 9.0e-120 434.1 320 68.1
A08p07950 Brassica napus HOM05D005261 ORTHO05D006180 4.5e-119 431.8 327 67.0
BraA08t32817Z Brassica rapa HOM05D005261 ORTHO05D006180 4.5e-119 431.8 327 67.0
AL1G50930 Arabidopsis lyrata HOM05D005261 ORTHO05D006180 7.6e-119 431.0 343 65.0
BcaC07g37496 Brassica carinata HOM05D005261 ORTHO05D006180 7.6e-119 431.0 338 65.1
A05p11060 Brassica napus HOM05D005261 ORTHO05D006180 7.6e-119 431.0 302 71.5
BolC8t47816H Brassica oleracea HOM05D005261 ORTHO05D006180 7.6e-119 431.0 338 65.1
SEGI_02326 Sequoiadendron giganteum HOM05D005261 ORTHO05D006180 3.8e-118 428.7 327 65.4
Lsat_1_v5_gn_1_3980 Lactuca sativa HOM05D005261 ORTHO05D006180 1.4e-117 426.8 314 68.5
Migut.N03156 Erythranthe guttata HOM05D005261 ORTHO05D006180 1.9e-117 426.4 316 69.3
Os02g0750500 Oryza sativa ssp. japonica HOM05D005261 ORTHO05D006180 3.2e-117 425.6 314 68.5
BolC4t23021H Brassica oleracea HOM05D005261 ORTHO05D006180 4.2e-117 425.2 297 71.7
CDE02G3063 Ceratophyllum demersum HOM05D005261 ORTHO05D006180 7.1e-117 424.5 324 67.0
TWI56G1213 Tripterygium wilfordii HOM05D005261 ORTHO05D006180 7.1e-117 424.5 298 73.2
Nn5g28978 Nelumbo nucifera HOM05D005261 ORTHO05D006180 9.3e-117 424.1 276 77.2
Zm00001eb255040 Zea mays HOM05D005261 ORTHO05D006180 1.2e-116 423.7 305 69.5
unitig_22.g6794 Utricularia gibba HOM05D005261 ORTHO05D006180 1.1e-114 417.2 301 69.4
HPP92_001925 Vanilla planifolia HOM05D005261 ORTHO05D006180 4.3e-114 415.2 310 67.7
TAR625G1239 Trochodendron aralioides HOM05D005261 ORTHO05D006180 2.8e-113 412.5 295 71.9
AUR62022337 Chenopodium quinoa HOM05D005261 ORTHO05D006180 6.3e-113 411.4 279 73.1
AUR62034370 Chenopodium quinoa HOM05D005261 ORTHO05D006180 6.3e-113 411.4 279 73.1
Potri.002G091300 Populus trichocarpa HOM05D005261 ORTHO05D006180 2.0e-111 406.4 342 62.0
SHI24797 Sapria himalayana HOM05D000002 ORTHO05D000001 1.3e-110 403.7 314 65.6
AUR62033704 Chenopodium quinoa HOM05D005261 ORTHO05D006180 2.5e-109 399.4 282 69.9
AUR62036786 Chenopodium quinoa HOM05D005261 ORTHO05D006180 5.5e-109 398.3 282 69.9
Peaxi162Scf00756g00436 Petunia axillaris HOM05D005261 ORTHO05D006180 7.2e-109 397.9 284 71.8
Mapoly0189s0001 Marchantia polymorpha HOM05D005261 ORTHO05D006180 8.2e-105 384.4 332 58.4
SMO361G0461 Selaginella moellendorffii HOM05D005261 ORTHO05D006180 5.3e-104 381.7 302 64.2
ATR0564G365 Amborella trichopoda HOM05D005261 ORTHO05D006180 1.0e-102 377.5 302 63.9
Pp3c8_16200 Physcomitrium patens HOM05D005261 ORTHO05D006180 2.9e-102 375.9 316 61.7
Oeu020872.1 Olea europaea HOM05D005261 ORTHO05D006180 2.5e-101 372.9 273 68.9
AagrBONN_evm.TU.Sc2ySwM_228.1177 Anthoceros agrestis HOM05D005261 ORTHO05D006180 7.2e-101 371.3 322 59.6
SHI53236 Sapria himalayana HOM05D005261 ORTHO05D006180 5.1e-99 365.2 322 59.6
Lalb_Chr17g0344051 Lupinus albus HOM05D005261 ORTHO05D006180 3.7e-97 359.0 284 68.3
SalBow8G1448 Salvia bowleyana HOM05D005261 ORTHO05D006180 5.3e-96 355.1 363 52.9
SHI35611 Sapria himalayana HOM05D005261 ORTHO05D006180 4.8e-89 332.0 291 60.1
ECA247G1584 Erigeron canadensis HOM05D000230 ORTHO05D006180 1.6e-87 327.0 234 72.2
Hma1.2p1_0276F.1_g111370 Hydrangea macrophylla HOM05D005261 ORTHO05D006180 5.9e-87 325.1 191 81.2
Lj3C845T19 Lonicera japonica HOM05D005261 ORTHO05D006180 1.6e-84 317.0 195 79.0
CBR_g15981 Chara braunii HOM05D005261 ORTHO05D006180 4.1e-80 302.4 340 49.7
COL.COLO4_16503 Corchorus olitorius HOM05D005261 ORTHO05D006180 1.3e-65 254.2 186 72.0
SHI34852 Sapria himalayana HOM05D005261 ORTHO05D006180 1.5e-61 240.7 288 50.0
SHI20620 Sapria himalayana HOM05D005261 ORTHO05D006180 1.4e-59 234.2 249 53.4
SHI34844 Sapria himalayana HOM05D005261 ORTHO05D006180 1.5e-58 230.7 284 49.6
SHI43763 Sapria himalayana HOM05D005261 ORTHO05D006180 3.7e-49 199.5 145 67.6
PRCOL_00005291 Prasinoderma coloniale HOM05D005261 ORTHO05D006180 1.4e-48 197.6 318 39.6
SHI46120 Sapria himalayana HOM05D005261 ORTHO05D006180 1.6e-47 194.1 145 66.9
Rhsim10G0118000 Rhododendron simsii HOM05D005261 ORTHO05D006180 1.3e-46 191.0 186 58.1
SHI53472 Sapria himalayana HOM05D005261 ORTHO05D006180 7.3e-45 185.3 168 58.3
SHI32317 Sapria himalayana HOM05D005261 ORTHO05D006180 1.6e-44 184.1 303 38.3
SHI52923 Sapria himalayana HOM05D005261 ORTHO05D006180 1.7e-41 174.1 166 57.2
Oeu017307.1 Olea europaea HOM05D005261 ORTHO05D006180 1.9e-37 160.6 93 81.7
SHI54958 Sapria himalayana HOM05D005261 ORTHO05D006180 9.6e-37 158.3 113 69.9
Cre04.g224002 Chlamydomonas reinhardtii HOM05D005261 ORTHO05D006180 1.8e-35 154.1 167 46.7
SHI49977 Sapria himalayana HOM05D005261 ORTHO05D006180 5.8e-34 149.1 164 50.6
SHI53189 Sapria himalayana HOM05D005261 ORTHO05D006180 3.2e-32 143.3 161 52.8
MCO14G461 Micromonas commoda HOM05D005261 ORTHO05D006180 7.8e-31 138.7 302 32.5
SHI49044 Sapria himalayana HOM05D005261 ORTHO05D006180 1.9e-29 134.0 127 57.5
Rhsim13G0124000 Rhododendron simsii HOM05D005261 ORTHO05D006180 7.1e-24 115.5 174 45.4
SHI51067 Sapria himalayana HOM05D005261 ORTHO05D006180 2.7e-23 113.6 139 46.0
SHI52089 Sapria himalayana HOM05D005261 ORTHO05D006180 5.1e-22 109.4 140 45.0
PGSC0003DMG401027564 Solanum tuberosum HOM05D001663 ORTHO05D003186 1.5e-21 107.8 61 82.0
SHI51747 Sapria himalayana HOM05D005261 ORTHO05D006180 7.3e-21 105.5 140 43.6
Lj3A845G93 Lonicera japonica HOM05D005261 ORTHO05D006180 1.3e-20 104.8 58 82.8
SHI41608 Sapria himalayana HOM05D005261 ORTHO05D006180 3.4e-18 96.7 145 43.4
SHI50342 Sapria himalayana HOM05D005261 ORTHO05D006180 7.1e-08 62.4 38 81.6


User provided reference genes

Program Settings