Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_26275_v3 Cicer arietinum L. HOM05D002448 ORTHO05D000001 1.8e-122 442.6 219 100.0
Ca_27268_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 3.0e-45 186.0 121 76.9
Ca_22884_v3 Cicer arietinum L. HOM05D002448 ORTHO05D002402 9.1e-42 174.5 121 72.7
Ca_26571_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 2.0e-41 173.3 123 74.0
Ca_26539_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 2.6e-41 172.9 122 71.3
Ca_02634_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 1.6e-38 163.7 120 69.2
Ca_27643_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 1.4e-37 160.6 121 71.1
Ca_20164_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 1.9e-31 140.2 120 61.7
Ca_14003_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 7.5e-28 128.3 90 75.6
Ca_20690_v3 Cicer arietinum L. HOM05D002448 ORTHO05D002402 2.2e-24 116.7 125 50.4
Ca_03910_v3 Cicer arietinum L. HOM05D002448 ORTHO05D002402 7.5e-20 101.7 121 49.6
Ca_14005_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000044 2.8e-19 99.8 62 77.4
Ca_26873_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 2.8e-19 99.8 62 77.4
Ca_26572_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 3.7e-19 99.4 64 75.0
Ca_28095_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 8.3e-19 98.2 62 71.0
Ca_26145_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 1.0e-16 91.3 120 48.3
Ca_13786_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 3.8e-16 89.4 68 64.7
TPR.G39722 Trifolium pratense HOM05D000006 ORTHO05D000001 2.3e-13 80.1 95 48.4
Ca_04990_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 1.3e-11 74.3 124 42.7
Ca_27622_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 1.7e-11 73.9 160 35.0
Ca_07385_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 2.8e-11 73.2 129 40.3
Ca_27756_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000001 2.8e-11 73.2 121 39.7
Ca_27838_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 2.8e-11 73.2 130 39.2
Phvul.006G014800 Phaseolus vulgaris HOM05D000006 ORTHO05D000001 2.8e-11 73.2 117 37.6
Ca_20124_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 3.7e-11 72.8 125 40.0
Ca_06976_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 6.3e-11 72.0 130 38.5
Ca_11977_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000001 1.1e-10 71.2 136 37.5
TPR.G39462 Trifolium pratense HOM05D000006 ORTHO05D000001 1.1e-10 71.2 101 39.6
Ca_02500_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 1.4e-10 70.9 130 37.7
Ca_27205_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 1.4e-10 70.9 198 30.8
Ca_11865_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 2.4e-10 70.1 134 36.6
Ca_20347_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000001 2.4e-10 70.1 150 36.0
Ca_27908_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 2.4e-10 70.1 136 39.0
Ca_03879_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000001 3.1e-10 69.7 130 38.5
Ca_19316_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 3.1e-10 69.7 128 39.1
Ca_27860_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 3.1e-10 69.7 196 30.6
Ca_06821_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 4.1e-10 69.3 199 32.2
Ca_28459_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 4.1e-10 69.3 124 39.5
Ca_02252_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 5.4e-10 68.9 122 38.5
Ca_28113_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 5.4e-10 68.9 130 37.7
Ca_26112_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 7.0e-10 68.6 114 40.4
CiPaw.06G091700 Carya illinoinensis HOM05D000006 ORTHO05D000001 1.6e-09 67.4 113 35.4
Ca_08009_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 1.6e-09 67.4 129 38.0
Ca_11996_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 2.0e-09 67.0 117 38.5
Ca_06245_v3 Cicer arietinum L. HOM05D002448 ORTHO05D002402 3.5e-09 66.2 51 62.7
Ca_27301_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 3.5e-09 66.2 129 38.0
Ca_27695_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000001 3.5e-09 66.2 130 37.7
CiPaw.03G110400 Carya illinoinensis HOM05D010003 ORTHO05D000001 5.9e-09 65.5 106 35.8
Ca_03808_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 5.9e-09 65.5 104 43.3
Ca_11871_v3 Cicer arietinum L. HOM05D002448 ORTHO05D002402 5.9e-09 65.5 51 62.7
Ca_19749_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 5.9e-09 65.5 127 36.2
Ca_27987_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 5.9e-09 65.5 133 37.6
Ca_27876_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 7.8e-09 65.1 124 37.1
Ca_28278_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 7.8e-09 65.1 127 37.8
Ca_06855_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 1.0e-08 64.7 130 39.2
Ca_12983_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 1.0e-08 64.7 116 38.8
Ca_19438_v3 Cicer arietinum L. HOM05D002448 ORTHO05D002402 1.0e-08 64.7 53 60.4
Ca_24254_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000001 1.0e-08 64.7 121 41.3
Ca_27013_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000001 1.0e-08 64.7 136 37.5
Ca_03202_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 1.3e-08 64.3 115 38.3
Ca_14002_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 1.3e-08 64.3 124 36.3
Ca_03258_v3 Cicer arietinum L. HOM05D002448 ORTHO05D002402 1.7e-08 63.9 51 58.8
Ca_14776_v3 Cicer arietinum L. HOM05D002448 ORTHO05D002402 1.7e-08 63.9 51 60.8
Ca_28365_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 1.7e-08 63.9 137 37.2
CiPaw.03G261000 Carya illinoinensis HOM05D000006 ORTHO05D000001 2.3e-08 63.5 113 34.5
Ca_23375_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 2.9e-08 63.2 132 37.9
Ca_27807_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 2.9e-08 63.2 134 35.8
Ca_19635_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 3.8e-08 62.8 136 34.6
Ca_14171_v3 Cicer arietinum L. HOM05D002448 ORTHO05D002402 5.0e-08 62.4 42 71.4
Ca_03061_v3 Cicer arietinum L. HOM05D002448 ORTHO05D002402 8.6e-08 61.6 51 62.7
Ca_05187_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 8.6e-08 61.6 95 43.2
Ca_05392_v3 Cicer arietinum L. HOM05D002448 ORTHO05D002402 8.6e-08 61.6 51 58.8
Ca_07182_v3 Cicer arietinum L. HOM05D002448 ORTHO05D002402 8.6e-08 61.6 87 44.8
Ca_11530_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 8.6e-08 61.6 138 36.2
Ca_12030_v3 Cicer arietinum L. HOM05D002448 ORTHO05D002402 8.6e-08 61.6 40 72.5
Ca_19633_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 8.6e-08 61.6 130 36.2
Ca_27270_v3 Cicer arietinum L. HOM05D002448 ORTHO05D002402 8.6e-08 61.6 51 58.8
Ca_27710_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 8.6e-08 61.6 106 39.6
Ca_02711_v3 Cicer arietinum L. HOM05D002448 ORTHO05D002402 1.1e-07 61.2 51 60.8
Ca_11972_v3 Cicer arietinum L. HOM05D002448 ORTHO05D002402 1.1e-07 61.2 51 62.7
Manes.07G085550 Manihot esculenta HOM05D010003 ORTHO05D000001 1.1e-07 61.2 129 31.8
TPR.G7709 Trifolium pratense HOM05D000006 ORTHO05D000001 1.5e-07 60.8 56 55.4
Ca_07606_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 1.9e-07 60.5 137 35.0
Ca_12371_v3 Cicer arietinum L. HOM05D002448 ORTHO05D002402 2.5e-07 60.1 51 56.9
Ca_27216_v3 Cicer arietinum L. HOM05D002448 ORTHO05D002402 2.5e-07 60.1 40 70.0
Ca_27602_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 2.5e-07 60.1 128 33.6
Ca_27755_v3 Cicer arietinum L. HOM05D002448 ORTHO05D002402 2.5e-07 60.1 51 56.9
Ca_30913_v3 Cicer arietinum L. HOM05D002448 ORTHO05D002402 2.5e-07 60.1 40 70.0
CiPaw.06G034700 Carya illinoinensis HOM05D000006 ORTHO05D000001 3.3e-07 59.7 99 35.4
CiPaw.10G102300 Carya illinoinensis HOM05D000006 ORTHO05D000001 3.3e-07 59.7 99 35.4
Ca_13573_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 3.3e-07 59.7 84 44.0
Ca_25407_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 3.3e-07 59.7 84 44.0
Ca_27343_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 3.3e-07 59.7 136 34.6
Ca_28138_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 3.3e-07 59.7 117 40.2
TPR.G14373 Trifolium pratense HOM05D000006 ORTHO05D000001 3.3e-07 59.7 124 35.5
Ca_02049_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 4.3e-07 59.3 102 41.2
Ca_12362_v3 Cicer arietinum L. HOM05D002448 ORTHO05D002402 4.3e-07 59.3 51 54.9
Ca_12366_v3 Cicer arietinum L. HOM05D002448 ORTHO05D002402 4.3e-07 59.3 51 54.9
Ca_31026_v3 Cicer arietinum L. HOM05D002448 ORTHO05D002402 4.3e-07 59.3 51 54.9
Ca_02458_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 5.6e-07 58.9 233 27.5
Ca_26506_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 5.6e-07 58.9 124 33.1
Ca_28392_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 5.6e-07 58.9 95 40.0
Ca_28469_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 5.6e-07 58.9 92 40.2
Manes.05G118952 Manihot esculenta HOM05D010003 ORTHO05D000001 5.6e-07 58.9 107 30.8
Sopen12g021440 Solanum pennellii HOM05D000006 ORTHO05D000001 5.6e-07 58.9 118 33.1
Thecc.09G212600 Theobroma cacao HOM05D000006 ORTHO05D000001 5.6e-07 58.9 131 30.5
Ca_02182_v3 Cicer arietinum L. HOM05D002448 ORTHO05D002402 7.3e-07 58.5 40 67.5
Ca_23500_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000001 7.3e-07 58.5 94 42.6
Ca_26664_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 7.3e-07 58.5 134 35.1
Ca_27798_v3 Cicer arietinum L. HOM05D002448 ORTHO05D002402 7.3e-07 58.5 41 65.9
Ca_27901_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 7.3e-07 58.5 122 34.4
Ca_28192_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 7.3e-07 58.5 123 34.1
Ca_07407_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 9.5e-07 58.2 109 37.6
Ca_19592_v3 Cicer arietinum L. HOM05D002448 ORTHO05D002402 9.5e-07 58.2 51 56.9
Ca_28082_v3 Cicer arietinum L. HOM05D002448 ORTHO05D002402 9.5e-07 58.2 51 54.9
Manes.14G166140 Manihot esculenta HOM05D010003 ORTHO05D000001 9.5e-07 58.2 118 31.4
Manes.16G053115 Manihot esculenta HOM05D010003 ORTHO05D000001 9.5e-07 58.2 106 34.0
Ca_06634_v3 Cicer arietinum L. HOM05D002448 ORTHO05D002402 1.2e-06 57.8 48 60.4
Ca_11642_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 1.2e-06 57.8 119 38.7
Ca_11644_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 1.2e-06 57.8 100 42.0
Ca_11955_v3 Cicer arietinum L. HOM05D002448 ORTHO05D002402 1.2e-06 57.8 51 51.0
Ca_11956_v3 Cicer arietinum L. HOM05D002448 ORTHO05D002402 1.2e-06 57.8 51 51.0
Ca_14934_v3 Cicer arietinum L. HOM05D002448 ORTHO05D002402 1.2e-06 57.8 82 37.8
Ca_19679_v3 Cicer arietinum L. HOM05D002448 ORTHO05D002402 1.2e-06 57.8 40 67.5
Ca_27562_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 1.2e-06 57.8 127 35.4
Ca_30841_v3 Cicer arietinum L. HOM05D002448 ORTHO05D002402 1.2e-06 57.8 40 67.5
CiPaw.16G041200 Carya illinoinensis HOM05D000006 ORTHO05D000001 1.6e-06 57.4 99 35.4
Ca_17764_v3 Cicer arietinum L. HOM05D002448 ORTHO05D002402 1.6e-06 57.4 63 49.2
Ca_19598_v3 Cicer arietinum L. HOM05D000775 ORTHO05D000585 1.6e-06 57.4 119 34.5
Ca_20033_v3 Cicer arietinum L. HOM05D002448 ORTHO05D002402 1.6e-06 57.4 51 54.9
Ca_26217_v3 Cicer arietinum L. HOM05D002448 ORTHO05D002402 1.6e-06 57.4 40 67.5
Ca_26456_v3 Cicer arietinum L. HOM05D002448 ORTHO05D002402 1.6e-06 57.4 59 52.5
Ca_29848_v3 Cicer arietinum L. HOM05D002448 ORTHO05D002402 1.6e-06 57.4 59 52.5
Ca_30949_v3 Cicer arietinum L. HOM05D002448 ORTHO05D002402 1.6e-06 57.4 40 67.5
Lalb_Chr06g0172871 Lupinus albus HOM05D033839 ORTHO05D036540 1.6e-06 57.4 57 50.9
Lalb_Chr20g0115741 Lupinus albus HOM05D033839 ORTHO05D036540 1.6e-06 57.4 73 45.2
Manes.15G017450 Manihot esculenta HOM05D010003 ORTHO05D000001 1.6e-06 57.4 214 25.2
Sopen05g023250 Solanum pennellii HOM05D000006 ORTHO05D000695 1.6e-06 57.4 197 29.9
TWI73G1285 Tripterygium wilfordii HOM05D000006 ORTHO05D000001 1.6e-06 57.4 112 34.8
Ca_14818_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 2.1e-06 57.0 137 34.3
Ca_27553_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 2.1e-06 57.0 93 41.9
Ca_28255_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 2.1e-06 57.0 99 41.4
Ca_00003_v3 Cicer arietinum L. HOM05D002448 ORTHO05D002402 2.8e-06 56.6 63 46.0
CiPaw.06G068400 Carya illinoinensis HOM05D000006 ORTHO05D000001 3.6e-06 56.2 99 34.3
CiPaw.16G044200 Carya illinoinensis HOM05D000006 ORTHO05D000001 3.6e-06 56.2 99 34.3
Ca_23996_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 3.6e-06 56.2 89 39.3
Ca_26742_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 3.6e-06 56.2 124 33.9
Manes.14G166180 Manihot esculenta HOM05D010003 ORTHO05D000001 3.6e-06 56.2 118 30.5
Ca_27066_v3 Cicer arietinum L. HOM05D002448 ORTHO05D002402 4.7e-06 55.8 51 54.9
Ca_27693_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 4.7e-06 55.8 121 35.5
Manes.07G074101 Manihot esculenta HOM05D010003 ORTHO05D000001 4.7e-06 55.8 125 32.0
Ca_07983_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 6.1e-06 55.5 122 36.1
Ca_26518_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 6.1e-06 55.5 93 39.8
Thecc.09G203000 Theobroma cacao HOM05D000006 ORTHO05D000001 6.1e-06 55.5 110 37.3
Ca_14565_v3 Cicer arietinum L. HOM05D002448 ORTHO05D002402 8.0e-06 55.1 50 54.0
Ca_14669_v3 Cicer arietinum L. HOM05D002448 ORTHO05D002402 8.0e-06 55.1 51 52.9
Ca_26828_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 8.0e-06 55.1 137 34.3
Ca_26972_v3 Cicer arietinum L. HOM05D002448 ORTHO05D002402 8.0e-06 55.1 49 61.2
Ca_30845_v3 Cicer arietinum L. HOM05D002448 ORTHO05D002402 8.0e-06 55.1 49 61.2
MELO3C024084.2 Cucumis melo HOM05D011212 ORTHO05D013315 8.0e-06 55.1 133 29.3
QL05p038736 Quercus lobata HOM05D011350 ORTHO05D000001 8.0e-06 55.1 156 32.7
TWI77G0097 Tripterygium wilfordii HOM05D000006 ORTHO05D000001 8.0e-06 55.1 128 36.7


User provided reference genes

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