Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_26242_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 2.4e-60 235.3 119 100.0
Ca_19987_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 2.0e-43 179.1 100 89.0
Ca_24102_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 3.2e-41 171.8 113 79.6
Gohir.D08G059650 Gossypium hirsutum HOM05D000002 ORTHO05D000001 9.6e-30 133.7 88 71.6
Gorai.013G068100 Gossypium raimondii HOM05D000002 ORTHO05D000001 2.8e-29 132.1 88 70.5
SHI18404 Sapria himalayana HOM05D000002 ORTHO05D000001 6.9e-28 127.5 96 59.4
Gohir.D05G339033 Gossypium hirsutum HOM05D000002 ORTHO05D000001 2.0e-27 125.9 88 69.3
SHI20723 Sapria himalayana HOM05D000002 ORTHO05D000001 4.5e-27 124.8 88 61.4
SHI15966 Sapria himalayana HOM05D000002 ORTHO05D000001 1.0e-26 123.6 105 53.3
SHI32573 Sapria himalayana HOM05D000002 ORTHO05D000001 1.7e-26 122.9 88 62.5
Gohir.D12G046850 Gossypium hirsutum HOM05D000002 ORTHO05D000001 3.8e-26 121.7 85 68.2
SHI12476 Sapria himalayana HOM05D000002 ORTHO05D000001 2.5e-25 119.0 107 54.2
SHI20499 Sapria himalayana HOM05D000002 ORTHO05D000001 7.2e-25 117.5 88 58.0
SHI10925 Sapria himalayana HOM05D000002 ORTHO05D000001 4.6e-24 114.8 79 63.3
SHI16269 Sapria himalayana HOM05D000002 ORTHO05D000001 1.3e-23 113.2 79 63.3
Sabra13G0054700 Salix brachista HOM05D000002 ORTHO05D011000 3.0e-23 112.1 113 52.2
SHI26801 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-21 106.3 72 65.3
SHI12928 Sapria himalayana HOM05D000002 ORTHO05D000001 2.2e-21 105.9 111 48.6
THA.LOC104810237 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 1.4e-20 103.2 92 54.3
VMungo0331G1422 Vigna mungo HOM05D003553 ORTHO05D005072 1.8e-20 102.8 82 58.5
SHI10179 Sapria himalayana HOM05D000002 ORTHO05D000001 2.6e-19 99.0 75 62.7
SHI27252 Sapria himalayana HOM05D000002 ORTHO05D000001 1.4e-17 93.2 72 61.1
SHI25153 Sapria himalayana HOM05D000002 ORTHO05D000001 3.2e-17 92.0 71 59.2
PSO210G4029 Papaver somniferum HOM05D000002 ORTHO05D000001 4.2e-17 91.7 94 42.6
SHI03125 Sapria himalayana HOM05D000002 ORTHO05D000001 4.2e-17 91.7 71 56.3
SHI17088 Sapria himalayana HOM05D000002 ORTHO05D000001 4.2e-17 91.7 72 59.7
PSO781G0062 Papaver somniferum HOM05D000002 ORTHO05D000001 5.5e-17 91.3 94 42.6
CSS0046672 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.4e-17 90.5 96 40.6
Sed0023100 Sechium edule HOM05D000002 ORTHO05D000001 9.4e-17 90.5 86 47.7
SHI19100 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-16 89.7 74 55.4
Sed0007235 Sechium edule HOM05D000002 ORTHO05D000001 2.7e-16 89.0 86 46.5
MD02G1295200 Malus domestica HOM05D000002 ORTHO05D000001 3.6e-16 88.6 92 40.2
PSO017G5132 Papaver somniferum HOM05D000002 ORTHO05D000001 3.6e-16 88.6 94 40.4
SHI34378 Sapria himalayana HOM05D000002 ORTHO05D000001 3.6e-16 88.6 111 43.2
SHI11263 Sapria himalayana HOM05D000002 ORTHO05D000001 4.6e-16 88.2 64 64.1
SHI27968 Sapria himalayana HOM05D000002 ORTHO05D000001 4.6e-16 88.2 63 61.9
SHI18284 Sapria himalayana HOM05D000002 ORTHO05D000001 1.0e-15 87.0 72 58.3
SHI05086 Sapria himalayana HOM05D000002 ORTHO05D000001 1.8e-15 86.3 86 45.3
AT1G48720 Arabidopsis thaliana HOM05D000002 ORTHO05D000001 2.3e-15 85.9 94 42.6
PSO832G0380 Papaver somniferum HOM05D000002 ORTHO05D000001 2.3e-15 85.9 94 39.4
SHI31472 Sapria himalayana HOM05D000002 ORTHO05D000001 3.0e-15 85.5 92 42.4
SHI19884 Sapria himalayana HOM05D000002 ORTHO05D000001 8.8e-15 84.0 81 44.4
TWI31G1144 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 8.8e-15 84.0 109 40.4
SHI17759 Sapria himalayana HOM05D000002 ORTHO05D000001 1.1e-14 83.6 81 43.2
SHI18478 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-14 83.2 86 44.2
SHI27560 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-14 83.2 67 62.7
Sed0005115 Sechium edule HOM05D000002 ORTHO05D000001 1.5e-14 83.2 86 44.2
PSO732G0520 Papaver somniferum HOM05D000002 ORTHO05D000001 2.0e-14 82.8 103 35.0
Sed0022174 Sechium edule HOM05D000002 ORTHO05D000001 2.0e-14 82.8 86 44.2
SHI37456 Sapria himalayana HOM05D000002 ORTHO05D000001 2.5e-14 82.4 81 43.2
SHI33003 Sapria himalayana HOM05D000002 ORTHO05D000001 3.3e-14 82.0 62 56.5
SHI37457 Sapria himalayana HOM05D000002 ORTHO05D000001 4.3e-14 81.6 81 43.2
SHI02929 Sapria himalayana HOM05D000002 ORTHO05D000001 5.7e-14 81.3 86 43.0
SHI09392 Sapria himalayana HOM05D000002 ORTHO05D000001 5.7e-14 81.3 86 43.0
SHI03313 Sapria himalayana HOM05D000002 ORTHO05D000001 7.4e-14 80.9 95 40.0
SHI29359 Sapria himalayana HOM05D000002 ORTHO05D000001 7.4e-14 80.9 73 45.2
TWI18G0957 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 7.4e-14 80.9 110 41.8
SHI02822 Sapria himalayana HOM05D000002 ORTHO05D000001 9.7e-14 80.5 81 42.0
SHI20463 Sapria himalayana HOM05D000002 ORTHO05D000001 9.7e-14 80.5 55 65.5
Sed0018924 Sechium edule HOM05D000002 ORTHO05D000001 9.7e-14 80.5 86 43.0
SHI14662 Sapria himalayana HOM05D000002 ORTHO05D000001 1.3e-13 80.1 86 43.0
SHI55107 Sapria himalayana HOM05D000002 ORTHO05D000001 1.3e-13 80.1 73 45.2
PSO013G0135 Papaver somniferum HOM05D000002 ORTHO05D000001 1.7e-13 79.7 94 37.2
SHI17046 Sapria himalayana HOM05D000002 ORTHO05D000001 1.7e-13 79.7 60 63.3
SHI33540 Sapria himalayana HOM05D000002 ORTHO05D000001 2.2e-13 79.3 75 44.0
SHI45229 Sapria himalayana HOM05D000002 ORTHO05D000001 2.2e-13 79.3 86 43.0
SHI11283 Sapria himalayana HOM05D000002 ORTHO05D000001 2.8e-13 79.0 81 42.0
TPR.G8649 Trifolium pratense HOM05D000002 ORTHO05D000001 2.8e-13 79.0 94 38.3
CANSAT21G0923 Cannabis sativa HOM05D000002 ORTHO05D000001 3.7e-13 78.6 90 41.1
Atru.chr6.330 Acer truncatum HOM05D000002 ORTHO05D000001 4.8e-13 78.2 87 40.2
SHI02588 Sapria himalayana HOM05D000002 ORTHO05D000001 4.8e-13 78.2 50 66.0
SHI11840 Sapria himalayana HOM05D000002 ORTHO05D000001 4.8e-13 78.2 63 57.1
TWI77G0407 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 6.3e-13 77.8 83 43.4
SHI00045 Sapria himalayana HOM05D000002 ORTHO05D000001 8.2e-13 77.4 86 41.9
SHI09631 Sapria himalayana HOM05D000002 ORTHO05D000001 8.2e-13 77.4 66 48.5
SHI01787 Sapria himalayana HOM05D000002 ORTHO05D000001 1.4e-12 76.6 73 45.2
SHI05338 Sapria himalayana HOM05D000002 ORTHO05D000001 1.4e-12 76.6 63 57.1
SHI12148 Sapria himalayana HOM05D000002 ORTHO05D000001 1.4e-12 76.6 63 52.4
SHI21150 Sapria himalayana HOM05D000002 ORTHO05D000001 1.4e-12 76.6 86 41.9
CiPaw.14G083000 Carya illinoinensis HOM05D000002 ORTHO05D000001 1.8e-12 76.3 83 38.6
SHI03433 Sapria himalayana HOM05D000002 ORTHO05D000001 1.8e-12 76.3 76 42.1
SHI12969 Sapria himalayana HOM05D000002 ORTHO05D000001 1.8e-12 76.3 81 40.7
SHI18342 Sapria himalayana HOM05D000002 ORTHO05D000001 1.8e-12 76.3 76 40.8
SHI32854 Sapria himalayana HOM05D000002 ORTHO05D000001 1.8e-12 76.3 73 43.8
SHI23530 Sapria himalayana HOM05D000002 ORTHO05D000001 2.4e-12 75.9 81 40.7
SHI28901 Sapria himalayana HOM05D000103 ORTHO05D000049 2.4e-12 75.9 47 76.6
CSS0000608 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.1e-12 75.5 104 35.6
CSS0030598 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.1e-12 75.5 86 41.9
THA.LOC104803469 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 4.1e-12 75.1 85 42.4
SHI26284 Sapria himalayana HOM05D000002 ORTHO05D000001 5.3e-12 74.7 64 59.4
THA.LOC104800056 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 5.3e-12 74.7 85 41.2
SHI28472 Sapria himalayana HOM05D000002 ORTHO05D000001 6.9e-12 74.3 85 42.4
SHI14836 Sapria himalayana HOM05D000002 ORTHO05D000001 9.1e-12 73.9 58 62.1
SHI26299 Sapria himalayana HOM05D000002 ORTHO05D000001 9.1e-12 73.9 76 40.8
MSTRG.1023 Avicennia marina HOM05D000002 ORTHO05D000001 1.5e-11 73.2 87 39.1
SHI10555 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-11 73.2 81 44.4
SHI19032 Sapria himalayana HOM05D001972 ORTHO05D002555 2.0e-11 72.8 73 42.5
SHI03734 Sapria himalayana HOM05D000002 ORTHO05D000001 4.5e-11 71.6 85 42.4
SHI44368 Sapria himalayana HOM05D000002 ORTHO05D000001 4.5e-11 71.6 73 41.1
THA.LOC104814053 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 4.5e-11 71.6 107 35.5
Gorai.N009900 Gossypium raimondii HOM05D000002 ORTHO05D000001 7.7e-11 70.9 98 35.7
SHI28427 Sapria himalayana HOM05D000002 ORTHO05D000001 7.7e-11 70.9 85 41.2
SHI33617 Sapria himalayana HOM05D000002 ORTHO05D000001 7.7e-11 70.9 66 53.0
SHI27649 Sapria himalayana HOM05D000002 ORTHO05D000001 1.3e-10 70.1 74 40.5
SHI37535 Sapria himalayana HOM05D000002 ORTHO05D000001 1.7e-10 69.7 73 41.1
SHI44612 Sapria himalayana HOM05D000002 ORTHO05D000001 1.7e-10 69.7 73 41.1
EL10As6g23699 Beta vulgaris HOM05D000002 ORTHO05D000001 2.2e-10 69.3 86 41.9
SHI25860 Sapria himalayana HOM05D000002 ORTHO05D000001 2.9e-10 68.9 81 42.0
EL10Ac1g01399 Beta vulgaris HOM05D000002 ORTHO05D000001 3.8e-10 68.6 82 41.5
SHI09371 Sapria himalayana HOM05D000002 ORTHO05D000001 3.8e-10 68.6 51 52.9
FvH4_5g22952 Fragaria vesca HOM05D019108 ORTHO05D000001 5.0e-10 68.2 76 39.5
Gohir.D07G173601 Gossypium hirsutum HOM05D000002 ORTHO05D000001 5.0e-10 68.2 98 35.7
Hma1.2p1_0775F.1_g216430 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 5.0e-10 68.2 95 35.8
SHI01726 Sapria himalayana HOM05D000002 ORTHO05D000001 6.5e-10 67.8 52 63.5
SHI22961 Sapria himalayana HOM05D000002 ORTHO05D000001 6.5e-10 67.8 73 43.8
SHI25000 Sapria himalayana HOM05D000002 ORTHO05D000001 6.5e-10 67.8 52 59.6
SHI18860 Sapria himalayana HOM05D000002 ORTHO05D000001 8.5e-10 67.4 86 40.7
PSO478G3780 Papaver somniferum HOM05D000002 ORTHO05D000001 1.1e-09 67.0 89 37.1
Potri.011G016400 Populus trichocarpa HOM05D000097 ORTHO05D000041 1.1e-09 67.0 87 34.5
SHI33900 Sapria himalayana HOM05D000002 ORTHO05D000001 1.1e-09 67.0 45 57.8
Hma1.2p1_0227F.1_g096220 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.9e-09 66.2 86 38.4
Hma1.2p1_0467F.1_g158660 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.9e-09 66.2 91 38.5
Hma1.2p1_0784F.1_g217250 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.5e-09 65.9 104 28.8
SHI05498 Sapria himalayana HOM05D000002 ORTHO05D000001 4.2e-09 65.1 63 42.9
SHI17313 Sapria himalayana HOM05D000002 ORTHO05D000001 4.2e-09 65.1 76 39.5
SHI21921 Sapria himalayana HOM05D000002 ORTHO05D000001 4.2e-09 65.1 52 50.0
CiPaw.15G172600 Carya illinoinensis HOM05D000002 ORTHO05D000001 5.5e-09 64.7 88 38.6
SHI03363 Sapria himalayana HOM05D000002 ORTHO05D000001 5.5e-09 64.7 73 35.6
VMungo1127G2280 Vigna mungo HOM05D001041 ORTHO05D000846 5.5e-09 64.7 75 40.0
CSS0002962 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.2e-09 64.3 100 36.0
SHI01955 Sapria himalayana HOM05D000002 ORTHO05D000001 9.4e-09 63.9 68 38.2
SHI05419 Sapria himalayana HOM05D000130 ORTHO05D000001 1.2e-08 63.5 48 58.3
EL10Ac4g08708 Beta vulgaris HOM05D000002 ORTHO05D000001 1.6e-08 63.2 80 36.2
Prupe.3G159700 Prunus persica HOM05D019108 ORTHO05D022647 2.7e-08 62.4 61 47.5
SHI07166 Sapria himalayana HOM05D000002 ORTHO05D000001 2.7e-08 62.4 73 42.5
SHI27033 Sapria himalayana HOM05D000002 ORTHO05D000001 4.7e-08 61.6 94 31.9
CSS0035821 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.1e-08 61.2 78 41.0
PSO190G0003 Papaver somniferum HOM05D000002 ORTHO05D000001 7.9e-08 60.8 70 37.1
CSS0020427 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.0e-07 60.5 104 30.8
PSO063G4430 Papaver somniferum HOM05D000002 ORTHO05D000001 1.0e-07 60.5 76 42.1
FvH4_7g13272 Fragaria vesca HOM05D000002 ORTHO05D000001 1.4e-07 60.1 70 44.3
PSO384G4495 Papaver somniferum HOM05D000002 ORTHO05D000001 1.4e-07 60.1 70 37.1
HanXRQChr02g0038571 Helianthus annuus HOM05D000002 ORTHO05D000001 1.8e-07 59.7 97 29.9
CSS0002172 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.0e-07 58.9 82 39.0
SHI00983 Sapria himalayana HOM05D000002 ORTHO05D000001 3.0e-07 58.9 62 38.7
Dinv24351 Davidia involucrata HOM05D000097 ORTHO05D000041 5.1e-07 58.2 75 36.0
Ah.04g160170 Amaranthus hybridus HOM05D000002 ORTHO05D000001 6.7e-07 57.8 94 36.2
FvH4_7g33701 Fragaria vesca HOM05D000002 ORTHO05D000001 8.8e-07 57.4 84 38.1
Hma1.2p1_0172F.1_g075940 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 8.8e-07 57.4 42 54.8
Prupe.1G219500 Prunus persica HOM05D000002 ORTHO05D000001 8.8e-07 57.4 88 35.2
HanXRQChr10g0310951 Helianthus annuus HOM05D000002 ORTHO05D000001 1.1e-06 57.0 79 35.4
HanXRQChr11g0342821 Helianthus annuus HOM05D000002 ORTHO05D000001 1.1e-06 57.0 79 35.4
TPR.G9293 Trifolium pratense HOM05D000002 ORTHO05D000001 1.5e-06 56.6 84 32.1
CSS0004228 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.0e-06 56.2 87 29.9
CSS0016795 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.0e-06 56.2 101 29.7
HanXRQChr06g0174011 Helianthus annuus HOM05D000002 ORTHO05D000001 2.0e-06 56.2 80 36.2
HanXRQChr15g0467201 Helianthus annuus HOM05D000002 ORTHO05D000001 2.0e-06 56.2 79 32.9
SHI15059 Sapria himalayana HOM05D000002 ORTHO05D000001 2.0e-06 56.2 44 47.7
HanXRQChr17g0552511 Helianthus annuus HOM05D000002 ORTHO05D000001 2.6e-06 55.8 79 36.7
SHI27923 Sapria himalayana HOM05D000002 ORTHO05D000001 2.6e-06 55.8 59 39.0
MSTRG.18601 Avicennia marina HOM05D000002 ORTHO05D000001 3.3e-06 55.5 76 35.5
SHI07975 Sapria himalayana HOM05D000002 ORTHO05D000001 3.3e-06 55.5 63 36.5
PSO170G2828 Papaver somniferum HOM05D000002 ORTHO05D000001 4.4e-06 55.1 84 31.0
SHI29906 Sapria himalayana HOM05D000002 ORTHO05D000001 4.4e-06 55.1 56 46.4
FvH4_3g21021 Fragaria vesca HOM05D000002 ORTHO05D000001 5.7e-06 54.7 90 32.2
Manes.10G049666 Manihot esculenta HOM05D000002 ORTHO05D000001 5.7e-06 54.7 92 34.8
PSO063G0686 Papaver somniferum HOM05D000002 ORTHO05D000001 5.7e-06 54.7 84 31.0
MD11G1074500 Malus domestica HOM05D000002 ORTHO05D000001 7.4e-06 54.3 78 30.8
SHI07283 Sapria himalayana HOM05D000002 ORTHO05D000001 7.4e-06 54.3 41 61.0
Ca_15063_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 9.7e-06 53.9 91 35.2
Ca_17397_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 9.7e-06 53.9 91 33.0
Ca_22722_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 9.7e-06 53.9 91 35.2
ECA248G2341 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.7e-06 53.9 70 37.1
Hma1.2p1_1750F.1_g300740 Hydrangea macrophylla HOM05D019108 ORTHO05D022647 9.7e-06 53.9 56 42.9


User provided reference genes

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