Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_26228_v3 Cicer arietinum L. HOM05D008175 ORTHO05D010403 1.1e-214 749.6 362 100.0
Medtr7g095350 Medicago truncatula HOM05D008175 ORTHO05D010403 5.9e-30 136.0 557 25.3
Potri.017G092301 Populus trichocarpa HOM05D008175 ORTHO05D000368 1.9e-28 131.0 434 28.8
TPR.G4066 Trifolium pratense HOM05D008175 ORTHO05D010403 4.2e-28 129.8 481 28.5
Medtr2g064400 Medicago truncatula HOM05D008175 ORTHO05D010403 3.0e-26 123.6 468 25.6
TPR.G9274 Trifolium pratense HOM05D009500 ORTHO05D000368 3.0e-26 123.6 402 29.4
TPR.G20555 Trifolium pratense HOM05D008175 ORTHO05D010403 1.5e-25 121.3 212 39.2
Psat0s1930g0040 Pisum sativum HOM05D008175 ORTHO05D010403 2.6e-25 120.6 495 25.7
Psat1g038560 Pisum sativum HOM05D008175 ORTHO05D010403 1.3e-24 118.2 152 48.0
Medtr6g013380 Medicago truncatula HOM05D008175 ORTHO05D010403 2.8e-24 117.1 575 24.9
Medtr6g013240 Medicago truncatula HOM05D008175 ORTHO05D010403 3.7e-24 116.7 581 24.4
Medtr7g116580 Medicago truncatula HOM05D009500 ORTHO05D000368 1.4e-23 114.8 413 26.4
TPR.G6942 Trifolium pratense HOM05D009500 ORTHO05D000368 2.4e-23 114.0 425 27.5
Medtr7g114090 Medicago truncatula HOM05D009500 ORTHO05D000368 2.7e-22 110.5 409 27.6
Medtr7g095560 Medicago truncatula HOM05D008175 ORTHO05D010403 3.5e-22 110.2 547 24.1
Sabra17G0081300 Salix brachista HOM05D000576 ORTHO05D000368 3.5e-22 110.2 461 25.4
TPR.G7001 Trifolium pratense HOM05D009500 ORTHO05D000368 5.9e-22 109.4 410 26.6
TPR.G24323 Trifolium pratense HOM05D008175 ORTHO05D010403 7.7e-22 109.0 163 42.3
TPR.G6938 Trifolium pratense HOM05D009500 ORTHO05D000368 1.0e-21 108.6 403 26.8
CSS0031751 Camellia sinensis var. sinensis HOM05D000576 ORTHO05D000368 1.1e-20 105.1 462 25.8
TPR.G4783 Trifolium pratense HOM05D009500 ORTHO05D000368 2.5e-20 104.0 419 25.8
Medtr7g105510 Medicago truncatula HOM05D008175 ORTHO05D010403 5.5e-20 102.8 211 34.1
TPR.G4800 Trifolium pratense HOM05D009500 ORTHO05D000368 2.1e-19 100.9 415 26.3
Medtr7g092650 Medicago truncatula HOM05D008175 ORTHO05D010403 3.6e-19 100.1 159 40.9
Medtr3g009910 Medicago truncatula HOM05D008175 ORTHO05D010403 2.3e-18 97.4 176 40.3
Medtr7g105980 Medicago truncatula HOM05D008175 ORTHO05D010403 4.4e-17 93.2 143 42.0
Psat1g038520 Pisum sativum HOM05D008175 ORTHO05D010403 7.5e-17 92.4 244 29.9
TPR.G4771 Trifolium pratense HOM05D009500 ORTHO05D000368 1.3e-16 91.7 355 26.8
TPR.G3814 Trifolium pratense HOM05D008175 ORTHO05D010403 1.7e-16 91.3 191 36.6
Psat7g057400 Pisum sativum HOM05D008175 ORTHO05D010403 2.2e-16 90.9 208 31.2
Dinv11451 Davidia involucrata HOM05D000576 ORTHO05D000368 4.9e-16 89.7 401 24.7
FAN02G2714 Fragaria x ananassa HOM05D006084 ORTHO05D007449 1.4e-15 88.2 286 31.5
Psat3g047200 Pisum sativum HOM05D008175 ORTHO05D010403 1.4e-15 88.2 209 30.6
Medtr7g087040 Medicago truncatula HOM05D008175 ORTHO05D010403 2.4e-15 87.4 149 39.6
TPR.G3860 Trifolium pratense HOM05D008175 ORTHO05D010403 2.4e-15 87.4 172 38.4
FAN02G4373 Fragaria x ananassa HOM05D008847 ORTHO05D000368 4.1e-15 86.7 297 28.6
TPR.G29221 Trifolium pratense HOM05D008175 ORTHO05D010403 5.4e-15 86.3 164 37.8
Medtr7g087840 Medicago truncatula HOM05D008175 ORTHO05D010403 1.2e-14 85.1 149 38.3
FAN14G3739 Fragaria x ananassa HOM05D000576 ORTHO05D000368 2.0e-14 84.3 296 25.0
Medtr2g032920 Medicago truncatula HOM05D008175 ORTHO05D010403 3.5e-14 83.6 150 39.3
Psat0s1584g0040 Pisum sativum HOM05D008175 ORTHO05D010403 3.5e-14 83.6 163 34.4
TPR.G20352 Trifolium pratense HOM05D008175 ORTHO05D010403 4.5e-14 83.2 121 44.6
Glyma.08G297700 Glycine max HOM05D000576 ORTHO05D000368 5.9e-14 82.8 157 34.4
TAR633G2125 Trochodendron aralioides HOM05D000576 ORTHO05D000368 7.8e-14 82.4 408 22.3
RcHm_v2.0_Chr2g0168251 Rosa chinensis HOM05D000576 ORTHO05D000368 1.7e-13 81.3 186 35.5
Psat4g131160 Pisum sativum HOM05D000576 ORTHO05D000368 2.3e-13 80.9 185 34.6
TAR636G0024 Trochodendron aralioides HOM05D000576 ORTHO05D000368 2.3e-13 80.9 362 26.2
Medtr6g071510 Medicago truncatula HOM05D008175 ORTHO05D010403 2.9e-13 80.5 133 39.8
Medtr6g471290 Medicago truncatula HOM05D008175 ORTHO05D010403 2.9e-13 80.5 133 39.8
Medtr8g468470 Medicago truncatula HOM05D000576 ORTHO05D000368 2.9e-13 80.5 185 34.1
TAR365G0551 Trochodendron aralioides HOM05D000576 ORTHO05D000368 2.9e-13 80.5 185 33.0
FvH4_6g47821 Fragaria vesca HOM05D000576 ORTHO05D000368 3.8e-13 80.1 240 25.8
TAR633G1895 Trochodendron aralioides HOM05D000576 ORTHO05D000368 3.8e-13 80.1 414 22.9
Psat3g003680 Pisum sativum HOM05D009500 ORTHO05D000368 1.1e-12 78.6 381 24.7
Rhsim13G0226200 Rhododendron simsii HOM05D000576 ORTHO05D000368 1.5e-12 78.2 461 22.6
Migut.C01282 Erythranthe guttata HOM05D000576 ORTHO05D000368 2.5e-12 77.4 164 31.7
FAN06G5009 Fragaria x ananassa HOM05D000576 ORTHO05D000368 2.5e-12 77.4 231 31.2
RcHm_v2.0_Chr2g0167551 Rosa chinensis HOM05D000576 ORTHO05D000368 2.5e-12 77.4 304 26.0
TAR365G0708 Trochodendron aralioides HOM05D000576 ORTHO05D000368 2.5e-12 77.4 227 30.0
CSS0035647 Camellia sinensis var. sinensis HOM05D000576 ORTHO05D000368 3.3e-12 77.0 205 29.3
FAN09G3162 Fragaria x ananassa HOM05D006084 ORTHO05D007449 3.3e-12 77.0 236 31.8
RcHm_v2.0_Chr2g0167641 Rosa chinensis HOM05D000576 ORTHO05D000368 3.3e-12 77.0 194 31.4
FAN09G2824 Fragaria x ananassa HOM05D000576 ORTHO05D000368 4.3e-12 76.6 187 31.6
FAN06G1177 Fragaria x ananassa HOM05D000576 ORTHO05D000368 5.6e-12 76.3 202 32.2
Medtr7g116250 Medicago truncatula HOM05D008175 ORTHO05D000368 5.6e-12 76.3 214 32.2
Phvul.003G068100 Phaseolus vulgaris HOM05D000576 ORTHO05D000368 1.2e-11 75.1 172 29.7
TPR.G7092 Trifolium pratense HOM05D008175 ORTHO05D010403 1.2e-11 75.1 92 46.7
FAN05G3797 Fragaria x ananassa HOM05D000576 ORTHO05D000368 1.6e-11 74.7 170 35.9
Medtr0176s0050 Medicago truncatula HOM05D008175 ORTHO05D010403 1.6e-11 74.7 180 32.2
TPR.G11377 Trifolium pratense HOM05D009500 ORTHO05D000368 1.6e-11 74.7 182 32.4
TAR636G3326 Trochodendron aralioides HOM05D000576 ORTHO05D000368 2.1e-11 74.3 142 38.0
FAN14G2415 Fragaria x ananassa HOM05D000576 ORTHO05D000368 2.8e-11 73.9 312 24.0
Medtr7g089620 Medicago truncatula HOM05D008175 ORTHO05D010403 2.8e-11 73.9 157 36.9
FAN09G3608 Fragaria x ananassa HOM05D000576 ORTHO05D000368 3.6e-11 73.6 292 24.7
TPR.G33251 Trifolium pratense HOM05D000576 ORTHO05D000368 3.6e-11 73.6 184 33.7
TAR633G2603 Trochodendron aralioides HOM05D000576 ORTHO05D000368 3.6e-11 73.6 368 23.9
Actinidia07081 Actinidia chinensis HOM05D000576 ORTHO05D000368 4.7e-11 73.2 364 25.8
FvH4_7g27481 Fragaria vesca HOM05D008847 ORTHO05D000368 4.7e-11 73.2 169 32.5
TPR.G4705 Trifolium pratense HOM05D008175 ORTHO05D000368 6.1e-11 72.8 294 27.2
TPR.G4714 Trifolium pratense HOM05D009500 ORTHO05D000368 8.0e-11 72.4 165 33.9
TAR371G0526 Trochodendron aralioides HOM05D000576 ORTHO05D000368 8.0e-11 72.4 357 24.9
Medtr1g111630 Medicago truncatula HOM05D009500 ORTHO05D000368 1.8e-10 71.2 296 25.7
TAR633G1517 Trochodendron aralioides HOM05D000576 ORTHO05D000368 1.8e-10 71.2 221 28.5
Ca_09502_v3 Cicer arietinum L. HOM05D009500 ORTHO05D000368 2.3e-10 70.9 163 33.1
FvH4_6g48431 Fragaria vesca HOM05D008847 ORTHO05D000368 3.0e-10 70.5 230 31.3
Ca_25084_v3 Cicer arietinum L. HOM05D009500 ORTHO05D010403 4.0e-10 70.1 214 30.8
Medtr7g095310 Medicago truncatula HOM05D008175 ORTHO05D010403 5.2e-10 69.7 113 40.7
Cfa001772 Carpinus fangiana HOM05D000576 ORTHO05D000368 6.8e-10 69.3 376 23.4
FvH4_6g48151 Fragaria vesca HOM05D000576 ORTHO05D000368 6.8e-10 69.3 367 24.3
FAN05G2407 Fragaria x ananassa HOM05D000576 ORTHO05D000368 6.8e-10 69.3 312 24.7
RcHm_v2.0_Chr3g0476161 Rosa chinensis HOM05D000576 ORTHO05D000368 6.8e-10 69.3 150 32.7
TPR.G24315 Trifolium pratense HOM05D008175 ORTHO05D010403 8.9e-10 68.9 99 44.4
Migut.F00694 Erythranthe guttata HOM05D000576 ORTHO05D000368 1.2e-09 68.6 334 22.2
FvH4_6g50840 Fragaria vesca HOM05D000576 ORTHO05D000368 1.2e-09 68.6 145 35.9
RcHm_v2.0_Chr5g0047501 Rosa chinensis HOM05D008847 ORTHO05D000368 1.5e-09 68.2 185 28.1
SGA_v2.0_scaffold44G16702 Striga asiatica HOM05D000576 ORTHO05D000368 1.5e-09 68.2 381 21.5
Medtr7g089570 Medicago truncatula HOM05D008175 ORTHO05D010403 2.0e-09 67.8 135 39.3
Psat5g038520 Pisum sativum HOM05D008175 ORTHO05D010403 2.0e-09 67.8 210 28.1
Hma1.2p1_0024F.1_g015920 Hydrangea macrophylla HOM05D000576 ORTHO05D000368 2.6e-09 67.4 330 20.9
Medtr7g092110 Medicago truncatula HOM05D008175 ORTHO05D010403 5.8e-09 66.2 114 39.5
TPR.G4702 Trifolium pratense HOM05D009500 ORTHO05D000368 5.8e-09 66.2 211 28.9
Medtr7g111100 Medicago truncatula HOM05D008175 ORTHO05D010403 7.5e-09 65.9 74 48.6
QL04p071108 Quercus lobata HOM05D000576 ORTHO05D000368 7.5e-09 65.9 349 24.6
TPR.G21834 Trifolium pratense HOM05D008175 ORTHO05D010403 7.5e-09 65.9 146 36.3
Dinv04865 Davidia involucrata HOM05D000576 ORTHO05D000368 1.7e-08 64.7 342 24.3
FAN14G2737 Fragaria x ananassa HOM05D000385 ORTHO05D000269 1.7e-08 64.7 150 30.7
GSVIVG01017697001 Vitis vinifera HOM05D000576 ORTHO05D000368 1.7e-08 64.7 182 31.9
Medtr7g092645 Medicago truncatula HOM05D008175 ORTHO05D010403 2.2e-08 64.3 87 44.8
Rhsim05G0090700 Rhododendron simsii HOM05D000576 ORTHO05D015329 2.2e-08 64.3 159 32.7
RcHm_v2.0_Chr2g0166621 Rosa chinensis HOM05D000576 ORTHO05D000368 2.2e-08 64.3 195 27.2
FAN14G0812 Fragaria x ananassa HOM05D000576 ORTHO05D000368 2.9e-08 63.9 145 35.2
RcHm_v2.0_Chr2g0106371 Rosa chinensis HOM05D029661 ORTHO05D029371 3.7e-08 63.5 221 29.4
Cc10_g03770 Coffea canephora HOM05D000576 ORTHO05D000368 4.9e-08 63.2 312 22.4
Dinv21743 Davidia involucrata HOM05D000576 ORTHO05D000368 4.9e-08 63.2 347 22.2
Medtr7g089617 Medicago truncatula HOM05D008175 ORTHO05D010403 4.9e-08 63.2 59 52.5
QL10p005093 Quercus lobata HOM05D000576 ORTHO05D000368 4.9e-08 63.2 337 23.4
FvH4_6g44020 Fragaria vesca HOM05D008847 ORTHO05D000368 6.4e-08 62.8 229 26.6
FAN05G4147 Fragaria x ananassa HOM05D008847 ORTHO05D000368 6.4e-08 62.8 271 25.8
MBI02_g05996_MAGBIO Magnolia biondii HOM05D000312 ORTHO05D008290 6.4e-08 62.8 167 29.3
MBI06_g04290_MAGBIO Magnolia biondii HOM05D000576 ORTHO05D000368 6.4e-08 62.8 138 30.4
Prupe.3G259800 Prunus persica HOM05D000576 ORTHO05D000368 6.4e-08 62.8 160 30.0
TAR371G1249 Trochodendron aralioides HOM05D000576 ORTHO05D000368 6.4e-08 62.8 176 29.0
TAR496G0003 Trochodendron aralioides HOM05D000576 ORTHO05D000368 6.4e-08 62.8 212 28.3
Aqoxy6G01742 Aquilegia oxysepala HOM05D000576 ORTHO05D000368 8.3e-08 62.4 152 33.6
Aqoxy6G01747 Aquilegia oxysepala HOM05D000576 ORTHO05D000368 8.3e-08 62.4 152 33.6
arahy.Tifrunner.gnm1.ann1.X3R901 Arachis hypogaea HOM05D000576 ORTHO05D000368 8.3e-08 62.4 150 29.3
MBI02_g05998_MAGBIO Magnolia biondii HOM05D000312 ORTHO05D000368 8.3e-08 62.4 174 28.2
Migut.O00220 Erythranthe guttata HOM05D000576 ORTHO05D000368 1.1e-07 62.0 341 22.3
TWI63G0411 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 1.1e-07 62.0 310 24.8
MBI16_g01187_MAGBIO Magnolia biondii HOM05D000576 ORTHO05D000368 1.4e-07 61.6 175 30.3
Medtr7g095390 Medicago truncatula HOM05D008175 ORTHO05D010403 1.4e-07 61.6 158 33.5
Migut.C01303 Erythranthe guttata HOM05D000576 ORTHO05D000368 2.4e-07 60.8 114 31.6
Medtr7g095340 Medicago truncatula HOM05D008175 ORTHO05D010403 2.4e-07 60.8 164 31.7
Aqoxy7G04064 Aquilegia oxysepala HOM05D000576 ORTHO05D000368 3.2e-07 60.5 122 32.0
CiPaw.10G088400 Carya illinoinensis HOM05D000576 ORTHO05D000368 3.2e-07 60.5 143 29.4
TAR629G2683 Trochodendron aralioides HOM05D000576 ORTHO05D000368 3.2e-07 60.5 212 27.8
MSTRG.8963 Avicennia marina HOM05D000576 ORTHO05D000368 4.1e-07 60.1 356 20.8
Medtr7g116260 Medicago truncatula HOM05D009500 ORTHO05D000368 5.4e-07 59.7 106 37.7
Rhsim08G0184100 Rhododendron simsii HOM05D000576 ORTHO05D000368 5.4e-07 59.7 290 21.7
RcHm_v2.0_Chr2g0167561 Rosa chinensis HOM05D000576 ORTHO05D000368 5.4e-07 59.7 132 31.8
Cc03_g13650 Coffea canephora HOM05D000576 ORTHO05D000368 7.0e-07 59.3 352 23.9
FAN10G0882 Fragaria x ananassa HOM05D000576 ORTHO05D000368 9.2e-07 58.9 136 33.1
TPR.G11409 Trifolium pratense HOM05D009500 ORTHO05D000368 9.2e-07 58.9 82 40.2
Dinv26720 Davidia involucrata HOM05D000576 ORTHO05D000368 1.2e-06 58.5 341 24.6
Medtr5g090500 Medicago truncatula HOM05D009500 ORTHO05D000368 1.2e-06 58.5 136 35.3
TPR.G4804 Trifolium pratense HOM05D008175 ORTHO05D000368 1.2e-06 58.5 95 43.2
FAN05G2544 Fragaria x ananassa HOM05D008847 ORTHO05D016304 1.6e-06 58.2 228 25.4
FAN06G0982 Fragaria x ananassa HOM05D000576 ORTHO05D000368 1.6e-06 58.2 128 35.2
FAN06G2289 Fragaria x ananassa HOM05D000576 ORTHO05D000368 1.6e-06 58.2 128 35.2
Lj8A85G34 Lonicera japonica HOM05D000576 ORTHO05D000368 1.6e-06 58.2 299 26.8
arahy.Tifrunner.gnm1.ann1.7MIU5M Arachis hypogaea HOM05D000576 ORTHO05D000368 2.7e-06 57.4 165 27.3
Dinv01310 Davidia involucrata HOM05D000576 ORTHO05D000368 2.7e-06 57.4 344 24.7
Hma1.2p1_2024F.1_g311420 Hydrangea macrophylla HOM05D000576 ORTHO05D000368 2.7e-06 57.4 134 26.9
ECA233G4739 Erigeron canadensis HOM05D000576 ORTHO05D000368 3.5e-06 57.0 345 22.3
Peaxi162Scf00683g00240 Petunia axillaris HOM05D013549 ORTHO05D000368 3.5e-06 57.0 135 31.1
Atru.chr4.3173 Acer truncatum HOM05D000576 ORTHO05D000368 4.6e-06 56.6 147 32.7
Aqoxy3G03803 Aquilegia oxysepala HOM05D000312 ORTHO05D000221 4.6e-06 56.6 276 25.4
FAN14G3852 Fragaria x ananassa HOM05D002281 ORTHO05D006774 4.6e-06 56.6 114 29.8
Manes.17G000300 Manihot esculenta HOM05D000576 ORTHO05D000368 4.6e-06 56.6 114 31.6
Atru.chr4.3172 Acer truncatum HOM05D000576 ORTHO05D000368 6.0e-06 56.2 147 32.0
Aqoxy4G01472 Aquilegia oxysepala HOM05D000312 ORTHO05D000368 6.0e-06 56.2 181 27.1
Migut.O00221 Erythranthe guttata HOM05D000576 ORTHO05D000368 6.0e-06 56.2 327 22.6
HanXRQChr08g0221771 Helianthus annuus HOM05D000576 ORTHO05D000368 6.0e-06 56.2 104 29.8
Os12g0127400 Oryza sativa ssp. japonica HOM05D000576 ORTHO05D000368 6.0e-06 56.2 139 33.1
TPR.G40354 Trifolium pratense HOM05D009500 ORTHO05D000368 6.0e-06 56.2 58 48.3
Migut.C01300 Erythranthe guttata HOM05D000576 ORTHO05D000368 7.8e-06 55.8 136 27.9
FAN06G2140 Fragaria x ananassa HOM05D008847 ORTHO05D000368 7.8e-06 55.8 171 31.0
FAN14G2376 Fragaria x ananassa HOM05D000576 ORTHO05D000368 7.8e-06 55.8 181 27.6
Medtr7g089610 Medicago truncatula HOM05D008175 ORTHO05D010403 7.8e-06 55.8 213 28.6
Oeu048256.1 Olea europaea HOM05D000576 ORTHO05D000368 7.8e-06 55.8 104 30.8
SGA_v2.0_scaffold70G23622 Striga asiatica HOM05D000576 ORTHO05D000368 7.8e-06 55.8 344 21.5


User provided reference genes

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