Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_26206_v3 Cicer arietinum L. HOM05D008143 ORTHO05D010256 9.8e-44 179.9 99 100.0
Lj1g0022952 Lotus japonicus HOM05D008143 ORTHO05D010256 7.8e-25 117.1 103 68.0
Medtr7g034335 Medicago truncatula HOM05D008143 ORTHO05D010256 3.0e-24 115.2 83 78.3
Psat3g161880 Pisum sativum HOM05D008143 ORTHO05D010256 1.9e-23 112.5 97 70.1
Atru.chr5.8 Acer truncatum HOM05D008143 ORTHO05D010256 1.8e-21 105.9 71 83.1
Glyma.06G310300 Glycine max HOM05D008143 ORTHO05D010256 5.8e-20 100.9 99 62.6
CiPaw.14G012000 Carya illinoinensis HOM05D008143 ORTHO05D010256 7.5e-20 100.5 78 74.4
TWI59G0267 Tripterygium wilfordii HOM05D008143 ORTHO05D010256 7.5e-20 100.5 91 65.9
Dinv43549 Davidia involucrata HOM05D000307 ORTHO05D010256 9.8e-20 100.1 81 71.6
Dinv43557 Davidia involucrata HOM05D008143 ORTHO05D010256 9.8e-20 100.1 81 71.6
Glyma.04G128500 Glycine max HOM05D008143 ORTHO05D010256 1.3e-19 99.8 99 62.6
Dinv43993 Davidia involucrata HOM05D008143 ORTHO05D010256 2.2e-19 99.0 97 61.9
Sed0007849 Sechium edule HOM05D000473 ORTHO05D009707 2.4e-18 95.5 87 63.2
Cpa.g.sc41.41 Carica papaya HOM05D008143 ORTHO05D010256 4.1e-18 94.7 87 63.2
PGR042G2567 Punica granatum HOM05D008143 ORTHO05D010256 5.4e-18 94.4 72 72.2
arahy.Tifrunner.gnm1.ann1.H93UBA Arachis hypogaea HOM05D008143 ORTHO05D010256 9.2e-18 93.6 70 77.1
QL04p024258 Quercus lobata HOM05D008143 ORTHO05D010256 9.2e-18 93.6 78 67.9
Oeu020235.1 Olea europaea HOM05D008143 ORTHO05D010256 4.6e-17 91.3 88 60.2
CAN.G700.4 Capsicum annuum HOM05D008143 ORTHO05D010256 1.3e-16 89.7 92 59.8
GSVIVG01026763001 Vitis vinifera HOM05D008143 ORTHO05D010256 1.3e-16 89.7 70 72.9
PGSC0003DMG400001819 Solanum tuberosum HOM05D008143 ORTHO05D010256 6.6e-16 87.4 70 68.6
Sabra14G0137200 Salix brachista HOM05D008143 ORTHO05D010256 1.5e-15 86.3 70 70.0
Ciclev10023977m.g Citrus clementina HOM05D008143 ORTHO05D010256 1.9e-15 85.9 94 55.3
Migut.N01814 Erythranthe guttata HOM05D008143 ORTHO05D010256 2.5e-15 85.5 69 69.6
Lalb_Chr19g0126471 Lupinus albus HOM05D008143 ORTHO05D010256 2.5e-15 85.5 93 61.3
Sopen01g032540 Solanum pennellii HOM05D008143 ORTHO05D010256 2.5e-15 85.5 70 68.6
Hma1.2p1_0076F.1_g039560 Hydrangea macrophylla HOM05D008143 ORTHO05D010256 3.3e-15 85.1 85 62.4
Sabra14G0139000 Salix brachista HOM05D008143 ORTHO05D010256 5.6e-15 84.3 70 68.6
CiPaw.13G019200 Carya illinoinensis HOM05D008143 ORTHO05D010256 7.3e-15 84.0 70 67.1
Solyc01g080950.3 Solanum lycopersicum HOM05D008143 ORTHO05D010256 9.5e-15 83.6 70 67.1
Aqoxy3G02407 Aquilegia oxysepala HOM05D008143 ORTHO05D010256 1.2e-14 83.2 70 65.7
arahy.Tifrunner.gnm1.ann1.3N3IDJ Arachis hypogaea HOM05D008143 ORTHO05D010256 1.2e-14 83.2 70 70.0
MD00G1098100 Malus domestica HOM05D008143 ORTHO05D010256 2.1e-14 82.4 83 62.7
Migut.N01697 Erythranthe guttata HOM05D008143 ORTHO05D010256 2.8e-14 82.0 70 65.7
FvH4_7g08030 Fragaria vesca HOM05D008143 ORTHO05D010256 3.6e-14 81.6 63 73.0
FAN01G0067 Fragaria x ananassa HOM05D008143 ORTHO05D010256 3.6e-14 81.6 63 73.0
FAN10G1551 Fragaria x ananassa HOM05D008143 ORTHO05D010256 3.6e-14 81.6 63 73.0
Prupe.2G109300 Prunus persica HOM05D008143 ORTHO05D010256 3.6e-14 81.6 84 59.5
Actinidia21604 Actinidia chinensis HOM05D008143 ORTHO05D010256 4.7e-14 81.3 86 58.1
RcHm_v2.0_Chr1g0341271 Rosa chinensis HOM05D008143 ORTHO05D010256 6.2e-14 80.9 63 76.2
Thecc.10G157800 Theobroma cacao HOM05D008143 ORTHO05D010256 6.2e-14 80.9 72 63.9
ClCG05G002660 Citrullus lanatus HOM05D008143 ORTHO05D010256 8.1e-14 80.5 73 64.4
MELO3C006232.2 Cucumis melo HOM05D008143 ORTHO05D010256 8.1e-14 80.5 73 64.4
HanXRQChr01g0020571 Helianthus annuus HOM05D008143 ORTHO05D010256 1.1e-13 80.1 85 52.9
CsaV3_3G010110 Cucumis sativus L. HOM05D008143 ORTHO05D010256 1.8e-13 79.3 73 63.0
Duzib128G1063 Durio zibethinus HOM05D008143 ORTHO05D010256 1.8e-13 79.3 75 62.7
SHI04152 Sapria himalayana HOM05D008143 ORTHO05D010256 1.8e-13 79.3 69 68.1
Cc02_g26140 Coffea canephora HOM05D008143 ORTHO05D010256 3.1e-13 78.6 76 60.5
FAN03G3180 Fragaria x ananassa HOM05D008143 ORTHO05D010256 3.1e-13 78.6 63 69.8
PSO017G2691 Papaver somniferum HOM05D008143 ORTHO05D010256 4.0e-13 78.2 97 51.5
Phvul.005G016300 Phaseolus vulgaris HOM05D008143 ORTHO05D010256 6.8e-13 77.4 100 52.0
MSTRG.28120 Avicennia marina HOM05D008143 ORTHO05D010256 1.2e-12 76.6 61 68.9
Potri.014G178900 Populus trichocarpa HOM05D008143 ORTHO05D010256 1.2e-12 76.6 70 62.9
ECA248G2885 Erigeron canadensis HOM05D008143 ORTHO05D010256 1.5e-12 76.3 82 54.9
Nitab4.5_0001209g0030 Nicotiana tabacum HOM05D008143 ORTHO05D010256 2.0e-12 75.9 103 47.6
Peaxi162Scf01110g00012 Petunia axillaris HOM05D008143 ORTHO05D010256 5.8e-12 74.3 70 60.0
Sed0022797 Sechium edule HOM05D008143 ORTHO05D010256 9.9e-12 73.6 69 60.9
SGA_v2.0_scaffold4G02202 Striga asiatica HOM05D008143 ORTHO05D010256 9.9e-12 73.6 70 60.0
TAR636G2193 Trochodendron aralioides HOM05D008143 ORTHO05D010256 1.3e-11 73.2 71 57.7
Nn1g00548 Nelumbo nucifera HOM05D008143 ORTHO05D010256 4.9e-11 71.2 94 47.9
Nn6g33614 Nelumbo nucifera HOM05D008143 ORTHO05D010256 6.4e-11 70.9 78 55.1
AUR62023336 Chenopodium quinoa HOM05D008143 ORTHO05D010256 2.4e-10 68.9 57 71.9
PSO170G4801 Papaver somniferum HOM05D008143 ORTHO05D010256 1.2e-09 66.6 97 46.4
Rhsim01G0146400 Rhododendron simsii HOM05D002374 ORTHO05D010256 7.8e-09 63.9 47 68.1
DCAR_015763 Daucus carota HOM05D008143 ORTHO05D010256 3.9e-08 61.6 73 53.4
MD02G1236800 Malus domestica HOM05D008143 ORTHO05D010256 5.1e-08 61.2 45 71.1
Sabra05G0099100 Salix brachista HOM05D008143 ORTHO05D010256 5.1e-08 61.2 60 60.0
VMungo1080G1030 Vigna mungo HOM05D008143 ORTHO05D010256 8.6e-08 60.5 85 47.1
Actinidia25623 Actinidia chinensis HOM05D008143 ORTHO05D010256 5.6e-07 57.8 85 47.1


User provided reference genes

Program Settings