Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_26120_v3 Cicer arietinum L. HOM05D004846 ORTHO05D005630 0.0e+00 1087.0 543 100.0
Psat3g169160 Pisum sativum HOM05D004846 ORTHO05D005630 3.7e-193 678.7 537 67.4
Medtr7g037280 Medicago truncatula HOM05D004846 ORTHO05D005630 1.4e-192 676.8 536 67.2
Glyma.19G082100 Glycine max HOM05D004846 ORTHO05D005630 2.3e-187 659.4 538 65.4
VMungo1127G0826 Vigna mungo HOM05D004846 ORTHO05D005630 4.3e-186 655.2 537 65.2
Lj1g0007607 Lotus japonicus HOM05D004846 ORTHO05D005630 3.0e-179 632.5 537 63.5
Lalb_Chr24g0403411 Lupinus albus HOM05D004846 ORTHO05D005630 5.1e-179 631.7 538 63.8
TPR.G9064 Trifolium pratense HOM05D004846 ORTHO05D005630 8.8e-179 630.9 520 65.2
arahy.Tifrunner.gnm1.ann1.QFX8QT Arachis hypogaea HOM05D004846 ORTHO05D005630 7.4e-178 627.9 532 63.0
arahy.Tifrunner.gnm1.ann1.EI4BFE Arachis hypogaea HOM05D004846 ORTHO05D005630 2.2e-177 626.3 531 62.9
QL02p072992 Quercus lobata HOM05D004846 ORTHO05D005630 3.5e-159 565.8 539 56.8
Prupe.3G299200 Prunus persica HOM05D004846 ORTHO05D005630 3.8e-158 562.4 535 56.3
GSVIVG01027213001 Vitis vinifera HOM05D004846 ORTHO05D005630 8.5e-158 561.2 537 56.2
Hma1.2p1_0279F.1_g112220 Hydrangea macrophylla HOM05D004846 ORTHO05D005630 1.9e-157 560.1 538 55.8
Haze_14810 Corylus avellana HOM05D004846 ORTHO05D005630 2.1e-156 556.6 516 58.1
Cfa007283 Carpinus fangiana HOM05D004846 ORTHO05D005630 4.7e-156 555.4 516 58.3
Dinv25698 Davidia involucrata HOM05D004846 ORTHO05D005630 1.4e-155 553.9 537 55.3
Cpa.g.sc130.45 Carica papaya HOM05D004846 ORTHO05D005630 1.8e-155 553.5 538 56.9
Atru.chr6.2483 Acer truncatum HOM05D004846 ORTHO05D005630 2.3e-155 553.1 537 55.1
MD09G1017700 Malus domestica HOM05D004846 ORTHO05D005630 2.8e-153 546.2 535 55.1
CANSAT64G0871 Cannabis sativa HOM05D004846 ORTHO05D005630 8.3e-153 544.7 538 54.8
Thecc.04G024900 Theobroma cacao HOM05D004846 ORTHO05D005630 1.1e-152 544.3 537 55.1
vmacro05920 Vaccinium macrocarpon HOM05D004846 ORTHO05D005630 4.1e-152 542.3 538 55.6
TAR371G0224 Trochodendron aralioides HOM05D004846 ORTHO05D005630 2.0e-151 540.0 537 54.0
Potri.001G338000 Populus trichocarpa HOM05D004846 ORTHO05D005630 4.5e-151 538.9 537 54.6
Dinv00597 Davidia involucrata HOM05D004846 ORTHO05D005630 5.9e-151 538.5 536 54.3
Rhsim10G0011500 Rhododendron simsii HOM05D004846 ORTHO05D005630 1.3e-150 537.3 538 55.2
Oeu062399.1 Olea europaea HOM05D004846 ORTHO05D005630 2.9e-150 536.2 539 54.7
ClCG05G017040 Citrullus lanatus HOM05D004846 ORTHO05D005630 1.9e-149 533.5 536 53.9
Ciclev10014098m.g Citrus clementina HOM05D004846 ORTHO05D005630 1.9e-149 533.5 538 54.8
MD17G1018500 Malus domestica HOM05D004846 ORTHO05D005630 1.9e-149 533.5 535 54.2
Gorai.011G093300 Gossypium raimondii HOM05D004846 ORTHO05D005630 4.2e-149 532.3 535 54.4
Gohir.D10G085400 Gossypium hirsutum HOM05D004846 ORTHO05D005630 5.5e-149 531.9 535 54.4
CsaV3_3G046520 Cucumis sativus L. HOM05D004846 ORTHO05D005630 1.6e-148 530.4 538 53.2
TWI15G0720 Tripterygium wilfordii HOM05D004846 ORTHO05D005630 1.8e-147 526.9 536 54.5
Sed0008655 Sechium edule HOM05D004846 ORTHO05D005630 5.2e-147 525.4 538 52.8
Actinidia05946 Actinidia chinensis HOM05D004846 ORTHO05D005630 6.8e-147 525.0 530 55.1
MBI15_g38527_MAGBIO Magnolia biondii HOM05D004846 ORTHO05D005630 6.8e-147 525.0 543 54.9
CSS0030635 Camellia sinensis var. sinensis HOM05D004846 ORTHO05D005630 8.9e-147 524.6 507 56.2
Eucgr.J02281 Eucalyptus grandis HOM05D004846 ORTHO05D005630 5.7e-146 521.9 532 53.0
Duzib187G0011 Durio zibethinus HOM05D004846 ORTHO05D005630 3.7e-145 519.2 533 53.7
Gohir.D09G032800 Gossypium hirsutum HOM05D004846 ORTHO05D005630 8.3e-145 518.1 517 54.0
RcHm_v2.0_Chr2g0174121 Rosa chinensis HOM05D004846 ORTHO05D005630 1.1e-144 517.7 538 52.4
THA.LOC104805347 Tarenaya hassleriana HOM05D004846 ORTHO05D005630 1.8e-144 516.9 535 53.6
Lj3C906G17 Lonicera japonica HOM05D004846 ORTHO05D005630 5.4e-144 515.4 532 52.8
Gorai.006G037800 Gossypium raimondii HOM05D004846 ORTHO05D005630 1.2e-143 514.2 517 53.6
Nn7g36106 Nelumbo nucifera HOM05D004846 ORTHO05D005630 1.2e-143 514.2 535 52.7
PGSC0003DMG402020229 Solanum tuberosum HOM05D004846 ORTHO05D005630 2.0e-143 513.5 533 53.7
FAN09G4064 Fragaria x ananassa HOM05D004846 ORTHO05D005630 2.7e-143 513.1 537 53.1
FvH4_6g52480 Fragaria vesca HOM05D004846 ORTHO05D005630 1.7e-142 510.4 537 52.7
A06p41290 Brassica napus HOM05D004846 ORTHO05D005630 2.3e-142 510.0 538 52.6
BraA06t27054Z Brassica rapa HOM05D004846 ORTHO05D005630 2.3e-142 510.0 538 52.6
FAN05G3122 Fragaria x ananassa HOM05D004846 ORTHO05D005630 2.3e-142 510.0 537 52.7
ATR0751G144 Amborella trichopoda HOM05D004846 ORTHO05D005630 2.9e-142 509.6 560 50.7
FAN14G2722 Fragaria x ananassa HOM05D004846 ORTHO05D005630 2.9e-142 509.6 537 52.5
Sabra16G0218700 Salix brachista HOM05D004846 ORTHO05D005630 3.9e-142 509.2 583 50.1
FAN02G3962 Fragaria x ananassa HOM05D004846 ORTHO05D005630 5.0e-142 508.8 537 53.1
Gohir.A09G032800 Gossypium hirsutum HOM05D004846 ORTHO05D005630 5.0e-142 508.8 517 53.4
PGR083G2372 Punica granatum HOM05D004846 ORTHO05D005630 8.6e-142 508.1 534 51.9
Sc09g0010530 Simmondsia chinensis HOM05D004846 ORTHO05D005630 1.1e-141 507.7 537 52.0
Solyc02g093770.3 Solanum lycopersicum HOM05D004846 ORTHO05D005630 2.5e-141 506.5 533 52.7
C07p36370 Brassica napus HOM05D004846 ORTHO05D005630 3.3e-141 506.1 538 52.2
BolC7t44153H Brassica oleracea HOM05D004846 ORTHO05D005630 4.3e-141 505.8 538 52.4
AL5G16590 Arabidopsis lyrata HOM05D004846 ORTHO05D005630 1.6e-140 503.8 512 53.7
Migut.H00055 Erythranthe guttata HOM05D004846 ORTHO05D005630 2.1e-140 503.4 532 52.1
Sopen02g038410 Solanum pennellii HOM05D004846 ORTHO05D005630 3.6e-140 502.7 533 52.3
Thhalv10003555m.g Eutrema salsugineum HOM05D004846 ORTHO05D005630 6.2e-140 501.9 537 52.1
AT3G27325 Arabidopsis thaliana HOM05D004846 ORTHO05D005630 1.4e-139 500.7 533 52.0
BolC2t11469H Brassica oleracea HOM05D004846 ORTHO05D005630 1.4e-139 500.7 536 52.4
CARHR040910 Cardamine hirsuta HOM05D004846 ORTHO05D005630 1.4e-139 500.7 538 51.7
Cc07_g00370 Coffea canephora HOM05D004846 ORTHO05D005630 3.1e-139 499.6 531 51.6
BcaC06g33832 Brassica carinata HOM05D004846 ORTHO05D005630 4.0e-139 499.2 538 51.9
C02p54070 Brassica napus HOM05D004846 ORTHO05D005630 4.0e-139 499.2 536 52.4
BcaC06g31008 Brassica carinata HOM05D004846 ORTHO05D005630 2.0e-138 496.9 538 51.9
Sp2g16490 Schrenkiella parvula HOM05D004846 ORTHO05D005630 2.0e-138 496.9 537 51.6
PSO210G2938 Papaver somniferum HOM05D004846 ORTHO05D005630 3.4e-138 496.1 537 51.0
Dinv33387 Davidia involucrata HOM05D004846 ORTHO05D005630 4.4e-138 495.7 535 51.4
MSTRG.24063 Avicennia marina HOM05D004846 ORTHO05D005630 9.8e-138 494.6 540 51.9
Carub.0005s0560 Capsella rubella HOM05D004846 ORTHO05D005630 9.8e-138 494.6 537 50.8
PSO210G2073 Papaver somniferum HOM05D004846 ORTHO05D005630 1.3e-137 494.2 537 50.7
Sed0014062 Sechium edule HOM05D004846 ORTHO05D005630 1.1e-136 491.1 538 50.7
A02p35330 Brassica napus HOM05D004846 ORTHO05D005630 1.4e-136 490.7 532 51.9
DCAR_013672 Daucus carota HOM05D004846 ORTHO05D005630 1.6e-135 487.3 516 50.8
BraA02t08536Z Brassica rapa HOM05D004846 ORTHO05D005630 6.0e-135 485.3 532 51.1
Ah.10g035510 Amaranthus hybridus HOM05D004846 ORTHO05D005630 3.9e-134 482.6 510 50.8
ECA233G5463 Erigeron canadensis HOM05D004846 ORTHO05D005630 5.0e-134 482.3 537 50.5
Hund19592 Selenicereus undatus HOM05D004846 ORTHO05D005630 2.8e-132 476.5 508 50.4
Aa31LG2G5360 Aethionema arabicum HOM05D004846 ORTHO05D005630 3.6e-132 476.1 537 50.1
SalBow2G2965 Salvia bowleyana HOM05D004846 ORTHO05D005630 8.1e-132 474.9 512 52.1
AUR62012470 Chenopodium quinoa HOM05D004846 ORTHO05D005630 4.0e-131 472.6 510 51.2
Nitab4.5_0001863g0210 Nicotiana tabacum HOM05D004846 ORTHO05D005630 9.8e-130 468.0 537 49.5
AUR62031596 Chenopodium quinoa HOM05D004846 ORTHO05D005630 1.3e-129 467.6 509 50.3
CAN.G473.55 Capsicum annuum HOM05D004846 ORTHO05D005630 6.4e-129 465.3 533 49.3
EL10Ac2g04126 Beta vulgaris HOM05D004846 ORTHO05D005630 9.2e-128 461.5 570 46.5
HanXRQChr07g0193151 Helianthus annuus HOM05D004846 ORTHO05D005630 2.1e-127 460.3 538 48.9
CDE01G0149 Ceratophyllum demersum HOM05D004846 ORTHO05D005630 7.8e-127 458.4 514 49.2
COL.COLO4_29272 Corchorus olitorius HOM05D004846 ORTHO05D005630 1.0e-126 458.0 537 50.1
Lsat_1_v5_gn_5_21981 Lactuca sativa HOM05D004846 ORTHO05D005630 1.7e-126 457.2 506 50.4
HPP92_021915 Vanilla planifolia HOM05D004846 ORTHO05D005630 5.1e-126 455.7 540 47.8
SGA_v2.0_scaffold135G34938 Striga asiatica HOM05D004846 ORTHO05D005630 4.3e-125 452.6 524 48.5
HanXRQChr02g0054051 Helianthus annuus HOM05D004846 ORTHO05D005630 3.6e-124 449.5 537 48.4
Ca_14683_v3 Cicer arietinum L. HOM05D004846 ORTHO05D005630 1.4e-120 437.6 238 93.3
SHI03857 Sapria himalayana HOM05D004846 ORTHO05D000023 1.0e-118 431.4 521 47.2
Os09g0266400 Oryza sativa ssp. japonica HOM05D004846 ORTHO05D005630 5.1e-118 429.1 535 46.5
Peaxi162Scf00420g00255 Petunia axillaris HOM05D004846 ORTHO05D005630 6.6e-118 428.7 537 47.1
unitig_1.g29345 Utricularia gibba HOM05D004846 ORTHO05D005630 2.5e-117 426.8 532 46.1
SGA_v2.0_scaffold66G22277 Striga asiatica HOM05D004846 ORTHO05D005630 1.2e-116 424.5 524 48.3
MELO3C003688.2 Cucumis melo HOM05D004846 ORTHO05D005630 3.1e-115 419.9 383 58.2
CDE02G2253 Ceratophyllum demersum HOM05D004846 ORTHO05D005630 9.9e-114 414.8 477 48.2
Phvul.008G148206 Phaseolus vulgaris HOM05D004846 ORTHO05D005630 4.2e-112 409.5 316 69.0
Mapoly0133s0025 Marchantia polymorpha HOM05D004846 ORTHO05D005630 3.2e-104 383.3 512 44.9
Pp3c12_23520 Physcomitrium patens HOM05D004846 ORTHO05D005630 1.3e-100 371.3 520 42.5
Pp3c3_36830 Physcomitrium patens HOM05D004846 ORTHO05D005630 6.2e-100 369.0 536 41.8
unitig_747.g22069 Utricularia gibba HOM05D004846 ORTHO05D005630 6.2e-100 369.0 538 42.8
AagrBONN_evm.TU.Sc2ySwM_228.569 Anthoceros agrestis HOM05D004846 ORTHO05D005630 7.6e-98 362.1 484 45.0
SMO119G0307 Selaginella moellendorffii HOM05D004846 ORTHO05D005630 3.8e-97 359.8 490 42.0
Manes.15G092600 Manihot esculenta HOM05D004846 ORTHO05D005630 6.7e-94 349.0 318 59.7
CiPaw.03G050100 Carya illinoinensis HOM05D004846 ORTHO05D005630 4.5e-90 336.3 231 71.9
Gohir.A10G160700 Gossypium hirsutum HOM05D004846 ORTHO05D005630 4.5e-90 336.3 316 57.0
unitig_748.g6968 Utricularia gibba HOM05D004846 ORTHO05D005630 1.3e-84 318.2 445 42.0
PGSC0003DMG403020229 Solanum tuberosum HOM05D004846 ORTHO05D005630 5.3e-75 286.2 199 71.4
Pp3c14_5780 Physcomitrium patens HOM05D004846 ORTHO05D005630 6.5e-57 226.1 207 54.1
CBR_g922 Chara braunii HOM05D004846 ORTHO05D005630 4.7e-55 219.9 557 30.2
Actinidia36162 Actinidia chinensis HOM05D004846 ORTHO05D005630 8.5e-49 199.1 500 30.8
Glyma.16G063300 Glycine max HOM05D004846 ORTHO05D005630 8.3e-36 156.0 94 79.8
Cfa027235 Carpinus fangiana HOM05D004846 ORTHO05D005630 1.1e-27 129.0 219 35.2
Zm00001eb308720 Zea mays HOM05D004846 ORTHO05D005630 5.9e-26 123.2 108 54.6
SEGI_31417 Sequoiadendron giganteum HOM05D004846 ORTHO05D005630 1.3e-20 105.5 96 58.3
Cpa.g.c47899 Carica papaya HOM05D004846 ORTHO05D005630 1.3e-17 95.5 58 72.4
MCO12G012 Micromonas commoda HOM05D004846 ORTHO05D005630 4.4e-13 80.5 550 22.2
Cre08.g363950 Chlamydomonas reinhardtii HOM05D004846 ORTHO05D005630 2.7e-10 71.2 185 30.3


User provided reference genes

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