Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_26114_v3 Cicer arietinum L. HOM05D006823 ORTHO05D008608 2.0e-136 489.2 264 100.0
Ca_12095_v3 Cicer arietinum L. HOM05D006823 ORTHO05D008608 6.5e-135 484.2 264 99.6
TPR.G24279 Trifolium pratense HOM05D006823 ORTHO05D008608 3.3e-115 418.7 265 84.9
Psat1g009680 Pisum sativum HOM05D006823 ORTHO05D008608 2.9e-111 405.6 256 86.7
Medtr1g053570 Medicago truncatula HOM05D006823 ORTHO05D008608 8.5e-111 404.1 259 85.3
Glyma.02G177100 Glycine max HOM05D006823 ORTHO05D008608 3.8e-103 378.6 270 78.1
Phvul.007G258100 Phaseolus vulgaris HOM05D006823 ORTHO05D008608 1.9e-102 376.3 258 79.5
Lj5g0012941 Lotus japonicus HOM05D006823 ORTHO05D008608 8.8e-100 367.5 269 77.7
Glyma.10G091300 Glycine max HOM05D006823 ORTHO05D008608 1.8e-92 343.2 266 72.2
arahy.Tifrunner.gnm1.ann1.DD58DK Arachis hypogaea HOM05D006823 ORTHO05D008608 5.2e-92 341.7 247 75.7
arahy.Tifrunner.gnm1.ann1.F8HZ0X Arachis hypogaea HOM05D006823 ORTHO05D008608 5.7e-91 338.2 270 71.9
Lalb_Chr10g0091151 Lupinus albus HOM05D006823 ORTHO05D008608 5.5e-86 321.6 268 69.8
Manes.08G045100 Manihot esculenta HOM05D006823 ORTHO05D008608 7.2e-86 321.2 268 65.7
Atru.chr8.1064 Acer truncatum HOM05D006823 ORTHO05D008608 2.1e-85 319.7 264 67.8
ClCG10G017400 Citrullus lanatus HOM05D006823 ORTHO05D008608 1.2e-83 313.9 264 64.0
Ciclev10012490m.g Citrus clementina HOM05D006823 ORTHO05D008608 1.5e-83 313.5 252 70.6
Sed0007671 Sechium edule HOM05D006823 ORTHO05D008608 2.6e-83 312.8 252 65.9
TWI74G0728 Tripterygium wilfordii HOM05D006823 ORTHO05D008608 1.7e-82 310.1 269 65.4
CANSAT64G2950 Cannabis sativa HOM05D006823 ORTHO05D008608 2.2e-82 309.7 254 66.9
CsaV3_3G038970 Cucumis sativus L. HOM05D006823 ORTHO05D008608 4.1e-81 305.4 264 63.6
Gorai.006G141900 Gossypium raimondii HOM05D006823 ORTHO05D008608 4.1e-81 305.4 263 65.0
arahy.Tifrunner.gnm1.ann1.R1CCT6 Arachis hypogaea HOM05D006823 ORTHO05D008608 5.4e-81 305.1 222 74.8
Gohir.D09G123300 Gossypium hirsutum HOM05D006823 ORTHO05D008608 7.0e-81 304.7 263 64.6
Potri.016G048600 Populus trichocarpa HOM05D006823 ORTHO05D008608 1.6e-80 303.5 256 64.1
Eucgr.K01827 Eucalyptus grandis HOM05D006823 ORTHO05D008608 2.7e-80 302.8 251 68.1
Duzib093G0556 Durio zibethinus HOM05D006823 ORTHO05D008608 3.5e-80 302.4 265 64.9
Prupe.7G074100 Prunus persica HOM05D006823 ORTHO05D008608 4.5e-80 302.0 254 67.3
Thecc.05G168800 Theobroma cacao HOM05D006823 ORTHO05D008608 7.7e-80 301.2 266 63.5
arahy.Tifrunner.gnm1.ann1.R3LTDD Arachis hypogaea HOM05D006823 ORTHO05D008608 1.7e-79 300.1 224 75.4
MD14G1060400 Malus domestica HOM05D006823 ORTHO05D008608 3.8e-79 298.9 253 67.6
GSVIVG01033521001 Vitis vinifera HOM05D006823 ORTHO05D008608 1.5e-78 297.0 266 63.5
CiPaw.09G031900 Carya illinoinensis HOM05D006823 ORTHO05D008608 5.6e-78 295.0 269 63.6
THA.LOC104802464 Tarenaya hassleriana HOM05D006823 ORTHO05D008608 5.6e-78 295.0 273 61.2
Haze_19965 Corylus avellana HOM05D006823 ORTHO05D008608 1.2e-77 293.9 264 65.2
FvH4_6g22650 Fragaria vesca HOM05D006823 ORTHO05D008608 1.2e-77 293.9 255 62.4
COL.COLO4_36138 Corchorus olitorius HOM05D006823 ORTHO05D008608 2.3e-76 289.7 246 63.4
CARHR168210 Cardamine hirsuta HOM05D006823 ORTHO05D008608 3.0e-76 289.3 257 61.5
FAN09G2832 Fragaria x ananassa HOM05D006823 ORTHO05D008608 3.0e-76 289.3 250 63.2
FAN14G3816 Fragaria x ananassa HOM05D006823 ORTHO05D008608 3.0e-76 289.3 256 62.1
Sabra16G0052300 Salix brachista HOM05D006823 ORTHO05D008608 4.0e-76 288.9 270 61.1
VMungo0720G1016 Vigna mungo HOM05D006823 ORTHO05D008608 5.2e-76 288.5 199 76.4
FAN14G5352 Fragaria x ananassa HOM05D006823 ORTHO05D008608 8.9e-76 287.7 256 62.1
Nn7g36040 Nelumbo nucifera HOM05D006823 ORTHO05D008608 3.4e-75 285.8 260 63.1
FAN05G5147 Fragaria x ananassa HOM05D006823 ORTHO05D008608 4.4e-75 285.4 251 62.2
CSS0029489 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 5.7e-75 285.0 259 59.5
AL5G39560 Arabidopsis lyrata HOM05D006823 ORTHO05D008608 1.3e-74 283.9 255 60.4
Lsat_1_v5_gn_8_75541 Lactuca sativa HOM05D006823 ORTHO05D008608 1.3e-74 283.9 254 63.4
AT3G57910 Arabidopsis thaliana HOM05D006823 ORTHO05D008608 1.7e-74 283.5 255 60.8
Carub.0005s2475 Capsella rubella HOM05D006823 ORTHO05D008608 4.9e-74 282.0 248 60.1
Thhalv10006171m.g Eutrema salsugineum HOM05D006823 ORTHO05D008608 1.1e-73 280.8 255 60.0
C06p24950 Brassica napus HOM05D002947 ORTHO05D003447 1.8e-73 280.0 259 59.5
BcaC08g44877 Brassica carinata HOM05D006823 ORTHO05D008608 4.1e-73 278.9 259 59.1
BolC6t37647H Brassica oleracea HOM05D002947 ORTHO05D003447 4.1e-73 278.9 259 59.1
arahy.Tifrunner.gnm1.ann1.HB0B2V Arachis hypogaea HOM05D006823 ORTHO05D008608 5.4e-73 278.5 247 67.2
BcaB02g07567 Brassica carinata HOM05D006823 ORTHO05D008608 7.0e-73 278.1 256 58.2
A07p23720 Brassica napus HOM05D002947 ORTHO05D003447 7.0e-73 278.1 253 59.7
BraA07t30025Z Brassica rapa HOM05D006823 ORTHO05D008608 9.2e-73 277.7 253 59.7
DCAR_013557 Daucus carota HOM05D006823 ORTHO05D008608 2.0e-72 276.6 252 62.3
Sp5g04810 Schrenkiella parvula HOM05D006823 ORTHO05D008608 3.5e-72 275.8 256 59.0
HanXRQChr05g0132841 Helianthus annuus HOM05D006823 ORTHO05D008608 1.7e-71 273.5 253 62.1
PSO339G6540 Papaver somniferum HOM05D006823 ORTHO05D008608 2.3e-71 273.1 250 60.8
Dinv24090 Davidia involucrata HOM05D006823 ORTHO05D008608 3.0e-71 272.7 255 60.0
RcHm_v2.0_Chr3g0480211 Rosa chinensis HOM05D006823 ORTHO05D008608 3.0e-71 272.7 251 61.4
Actinidia17264 Actinidia chinensis HOM05D006823 ORTHO05D008608 6.6e-71 271.6 260 59.2
Aa31LG10G12620 Aethionema arabicum HOM05D006823 ORTHO05D008608 6.6e-71 271.6 267 57.3
FAN02G3510 Fragaria x ananassa HOM05D006823 ORTHO05D008608 7.3e-70 268.1 250 60.4
MBI01_g24371_MAGBIO Magnolia biondii HOM05D006823 ORTHO05D008608 7.3e-70 268.1 283 57.6
Rhsim04G0097800 Rhododendron simsii HOM05D006823 ORTHO05D008608 2.1e-69 266.5 254 60.6
CSS0004284 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 2.8e-69 266.2 261 59.0
PSO384G3045 Papaver somniferum HOM05D006823 ORTHO05D008608 8.9e-68 261.2 249 59.0
Hund19193 Selenicereus undatus HOM05D006823 ORTHO05D008608 8.9e-68 261.2 256 59.8
TAR623G1194 Trochodendron aralioides HOM05D006823 ORTHO05D008608 1.2e-67 260.8 236 66.1
CDE04G3233 Ceratophyllum demersum HOM05D006823 ORTHO05D008608 5.8e-67 258.5 252 59.9
Solyc11g065380.2 Solanum lycopersicum HOM05D006823 ORTHO05D008608 8.3e-66 254.6 253 57.3
EL10Ac3g06941 Beta vulgaris HOM05D006823 ORTHO05D008608 1.1e-65 254.2 266 56.8
SGA_v2.0_scaffold69G23076 Striga asiatica HOM05D006823 ORTHO05D008608 1.9e-65 253.4 272 56.6
MSTRG.19895 Avicennia marina HOM05D006823 ORTHO05D008608 1.6e-64 250.4 251 57.8
Lj2A371G33 Lonicera japonica HOM05D006823 ORTHO05D008608 1.0e-63 247.7 252 60.3
Gohir.A09G127050 Gossypium hirsutum HOM05D006823 ORTHO05D008608 6.6e-63 245.0 202 64.4
CSS0050046 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 8.6e-63 244.6 258 57.8
PGSC0003DMG401029997 Solanum tuberosum HOM05D006823 ORTHO05D008608 4.3e-62 242.3 253 55.7
Migut.J01822 Erythranthe guttata HOM05D006823 ORTHO05D008608 8.1e-61 238.0 252 56.7
MELO3C009640.2 Cucumis melo HOM05D006823 ORTHO05D008608 1.4e-60 237.3 205 61.5
HPP92_015470 Vanilla planifolia HOM05D006823 ORTHO05D008608 1.8e-60 236.9 251 53.4
Nitab4.5_0003572g0020 Nicotiana tabacum HOM05D006823 ORTHO05D008608 2.3e-60 236.5 253 55.3
Sc25g0005140 Simmondsia chinensis HOM05D006823 ORTHO05D008608 8.9e-60 234.6 247 58.3
unitig_26.g9037 Utricularia gibba HOM05D006823 ORTHO05D008608 7.5e-59 231.5 252 54.4
ATR0605G325 Amborella trichopoda HOM05D006823 ORTHO05D008608 3.7e-58 229.2 204 61.8
Nitab4.5_0000016g0280 Nicotiana tabacum HOM05D006823 ORTHO05D008608 1.1e-57 227.6 251 53.0
ECA236G4823 Erigeron canadensis HOM05D006823 ORTHO05D000001 3.2e-57 226.1 238 56.3
CAN.G717.3 Capsicum annuum HOM05D006823 ORTHO05D008608 3.5e-56 222.6 235 56.6
Sopen11g025160 Solanum pennellii HOM05D006823 ORTHO05D008608 1.9e-54 216.9 252 54.0
vmacro09107 Vaccinium macrocarpon HOM05D006823 ORTHO05D008608 2.8e-53 213.0 221 56.1
Cc00_g14630 Coffea canephora HOM05D006823 ORTHO05D008608 1.4e-52 210.7 252 53.2
AUR62012062 Chenopodium quinoa HOM05D006823 ORTHO05D008608 9.2e-49 198.0 242 48.3
AUR62024323 Chenopodium quinoa HOM05D006823 ORTHO05D008608 1.5e-46 190.7 257 44.4
Aqoxy1G00161 Aquilegia oxysepala HOM05D006823 ORTHO05D008608 1.2e-45 187.6 189 54.5
FvH4_6g22250 Fragaria vesca HOM05D006823 ORTHO05D008608 6.8e-44 181.8 161 60.2
CSS0035925 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 8.9e-44 181.4 156 64.1
Zm00001eb035020 Zea mays HOM05D006823 ORTHO05D008608 4.4e-43 179.1 257 41.6
arahy.Tifrunner.gnm1.ann1.WS1HM8 Arachis hypogaea HOM05D006823 ORTHO05D008608 5.8e-43 178.7 129 73.6
SEGI_05037 Sequoiadendron giganteum HOM05D006823 ORTHO05D008608 2.2e-42 176.8 255 43.5
Os08g0509500 Oryza sativa ssp. japonica HOM05D006823 ORTHO05D008608 1.6e-40 170.6 254 45.3
CSS0008909 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 5.1e-39 165.6 152 55.9
Mapoly0104s0025 Marchantia polymorpha HOM05D006823 ORTHO05D008608 6.2e-37 158.7 270 37.8
Pp3c21_14790 Physcomitrium patens HOM05D006823 ORTHO05D008608 1.8e-36 157.1 276 40.6
CSS0018235 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 3.8e-34 149.4 161 54.7
AagrBONN_evm.TU.Sc2ySwM_369.80 Anthoceros agrestis HOM05D006823 ORTHO05D008608 1.1e-33 147.9 258 40.7
arahy.Tifrunner.gnm1.ann1.ZK4YW6 Arachis hypogaea HOM05D006823 ORTHO05D008608 2.4e-33 146.7 221 48.4
CSS0004878 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 4.0e-28 129.4 119 63.0
CSS0021268 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 4.0e-28 129.4 119 63.0
arahy.Tifrunner.gnm1.ann1.V1GDUY Arachis hypogaea HOM05D006823 ORTHO05D008608 4.5e-27 125.9 163 50.3
SMO145G0064 Selaginella moellendorffii HOM05D006823 ORTHO05D008608 1.1e-25 121.3 256 38.7
Zm00001eb106730 Zea mays HOM05D006823 ORTHO05D008608 1.1e-22 111.3 163 41.7
CBR_g4860 Chara braunii HOM05D006823 ORTHO05D008608 1.9e-17 94.0 333 28.5
Zm00001eb092000 Zea mays HOM05D006823 ORTHO05D008608 7.9e-16 88.6 166 38.0
Zm00001eb385990 Zea mays HOM05D006823 ORTHO05D008608 1.3e-10 71.2 125 40.0
Cpa.g.sc85.85 Carica papaya HOM05D006823 ORTHO05D008608 3.8e-10 69.7 45 64.4
Zm00001eb116260 Zea mays HOM05D006823 ORTHO05D008608 5.5e-09 65.9 111 39.6
Peaxi162Scf00258g00118 Petunia axillaris HOM05D006823 ORTHO05D008608 1.2e-08 64.7 57 54.4
Oeu006328.1 Olea europaea HOM05D006753 ORTHO05D008521 1.5e-06 57.8 65 43.1
arahy.Tifrunner.gnm1.ann1.YLS7HT Arachis hypogaea HOM05D006823 ORTHO05D008608 2.5e-06 57.0 43 69.8


User provided reference genes

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