Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_26102_v3 Cicer arietinum L. HOM05D005335 ORTHO05D006472 3.4e-53 211.8 146 100.0
Psat4g066680 Pisum sativum HOM05D005335 ORTHO05D006472 2.5e-43 179.1 147 89.1
TPR.G19227 Trifolium pratense HOM05D005335 ORTHO05D006472 7.1e-43 177.6 147 87.8
Medtr4g103250 Medicago truncatula HOM05D005335 ORTHO05D006472 5.9e-37 157.9 146 82.2
VMungo1215G0398 Vigna mungo HOM05D005335 ORTHO05D006472 2.9e-36 155.6 148 80.4
Lj4g0005056 Lotus japonicus HOM05D005335 ORTHO05D006472 3.8e-36 155.2 146 64.4
Glyma.17G130400 Glycine max HOM05D005335 ORTHO05D006472 2.3e-33 146.0 154 76.0
Lalb_Chr07g0183461 Lupinus albus HOM05D005335 ORTHO05D006472 4.3e-32 141.7 146 79.5
Glyma.05G048500 Glycine max HOM05D005335 ORTHO05D006472 6.3e-31 137.9 153 75.8
Lalb_Chr13g0297231 Lupinus albus HOM05D005335 ORTHO05D006472 4.5e-29 131.7 147 66.0
Hma1.2p1_0014F.1_g009400 Hydrangea macrophylla HOM05D005335 ORTHO05D006472 2.3e-25 119.4 172 60.5
Gohir.A07G051200 Gossypium hirsutum HOM05D005335 ORTHO05D006472 1.3e-23 113.6 154 66.2
Actinidia36728 Actinidia chinensis HOM05D005335 ORTHO05D006472 1.7e-23 113.2 123 53.7
Gohir.D07G055600 Gossypium hirsutum HOM05D005335 ORTHO05D006472 2.2e-23 112.8 154 66.2
Gorai.001G058900 Gossypium raimondii HOM05D005335 ORTHO05D006472 2.2e-23 112.8 154 66.2
Duzib205G0334 Durio zibethinus HOM05D005335 ORTHO05D006472 4.8e-23 111.7 172 57.6
Atru.chr6.1795 Acer truncatum HOM05D005335 ORTHO05D006472 8.2e-23 110.9 160 63.8
Thecc.03G129400 Theobroma cacao HOM05D005335 ORTHO05D006472 1.4e-22 110.2 170 60.0
Manes.06G119800 Manihot esculenta HOM05D005335 ORTHO05D006472 2.4e-22 109.4 176 63.1
Sed0021893 Sechium edule HOM05D005335 ORTHO05D006472 3.1e-22 109.0 150 60.7
Rhsim08G0190300 Rhododendron simsii HOM05D005335 ORTHO05D006472 4.1e-22 108.6 156 55.1
Duzib084G1383 Durio zibethinus HOM05D005335 ORTHO05D006472 5.3e-22 108.2 173 45.1
TAR371G0199 Trochodendron aralioides HOM05D005335 ORTHO05D006472 5.3e-22 108.2 164 54.9
Cpa.g.sc13.114 Carica papaya HOM05D005335 ORTHO05D006472 2.6e-21 105.9 174 61.5
COL.COLO4_28131 Corchorus olitorius HOM05D005335 ORTHO05D006472 2.6e-21 105.9 175 60.0
MELO3C026206.2 Cucumis melo HOM05D005335 ORTHO05D006472 4.5e-21 105.1 174 60.9
ClCG06G017900 Citrullus lanatus HOM05D005335 ORTHO05D006472 5.9e-21 104.8 174 60.9
Potri.012G097901 Populus trichocarpa HOM05D005335 ORTHO05D006472 5.9e-21 104.8 126 71.4
CiPaw.11G007000 Carya illinoinensis HOM05D005335 ORTHO05D006472 6.5e-20 101.3 174 59.2
MD06G1141500 Malus domestica HOM05D005335 ORTHO05D006472 6.5e-20 101.3 170 62.4
Cfa018794 Carpinus fangiana HOM05D005335 ORTHO05D006472 8.5e-20 100.9 146 68.5
Nn3g16458 Nelumbo nucifera HOM05D005335 ORTHO05D006472 8.5e-20 100.9 171 43.9
PGR044G0086 Punica granatum HOM05D005335 ORTHO05D006472 8.5e-20 100.9 170 52.4
Ciclev10032959m.g Citrus clementina HOM05D005335 ORTHO05D006472 1.1e-19 100.5 159 64.2
Haze_07140 Corylus avellana HOM05D005335 ORTHO05D006472 1.1e-19 100.5 146 69.2
FAN13G0785 Fragaria x ananassa HOM05D005335 ORTHO05D006472 1.1e-19 100.5 175 53.1
Dinv11173 Davidia involucrata HOM05D001420 ORTHO05D002488 1.4e-19 100.1 119 63.0
Sabra12G0071600 Salix brachista HOM05D005335 ORTHO05D006472 1.4e-19 100.1 127 67.7
TAR629G1091 Trochodendron aralioides HOM05D005335 ORTHO05D006472 1.4e-19 100.1 165 58.2
QL10p002879 Quercus lobata HOM05D005335 ORTHO05D006472 1.9e-19 99.8 183 50.8
Sabra15G0117300 Salix brachista HOM05D005335 ORTHO05D006472 1.9e-19 99.8 126 69.8
FAN04G0838 Fragaria x ananassa HOM05D005335 ORTHO05D006472 2.5e-19 99.4 176 59.7
TWI39G0987 Tripterygium wilfordii HOM05D005335 ORTHO05D006472 2.5e-19 99.4 173 62.4
Lsat_1_v5_gn_4_80981 Lactuca sativa HOM05D005335 ORTHO05D006472 3.2e-19 99.0 176 58.0
RcHm_v2.0_Chr7g0190101 Rosa chinensis HOM05D005335 ORTHO05D006472 4.2e-19 98.6 168 61.9
Potri.015G096500 Populus trichocarpa HOM05D005335 ORTHO05D006472 5.5e-19 98.2 126 72.2
CsaV3_1G000550 Cucumis sativus L. HOM05D005335 ORTHO05D006472 7.2e-19 97.8 172 59.3
CSS0021703 Camellia sinensis var. sinensis HOM05D005335 ORTHO05D006472 1.6e-18 96.7 151 45.7
Gohir.A09G247000 Gossypium hirsutum HOM05D005335 ORTHO05D006472 2.1e-18 96.3 159 50.3
Gohir.D09G247500 Gossypium hirsutum HOM05D005335 ORTHO05D006472 2.1e-18 96.3 159 44.7
Gorai.006G272000 Gossypium raimondii HOM05D005335 ORTHO05D006472 2.1e-18 96.3 159 44.7
Cc04_g09930 Coffea canephora HOM05D005335 ORTHO05D006472 3.6e-18 95.5 173 54.9
A01p25690 Brassica napus HOM05D005335 ORTHO05D006472 6.1e-18 94.7 158 42.4
A06p19120 Brassica napus HOM05D005335 ORTHO05D006472 6.1e-18 94.7 155 41.3
BraA01t02445Z Brassica rapa HOM05D005335 ORTHO05D006472 6.1e-18 94.7 158 42.4
BraA06t24996Z Brassica rapa HOM05D005335 ORTHO05D006472 6.1e-18 94.7 155 41.3
CAN.G1305.23 Capsicum annuum HOM05D005335 ORTHO05D006472 8.0e-18 94.4 151 62.3
BolC1t03128H Brassica oleracea HOM05D005335 ORTHO05D006472 1.0e-17 94.0 158 42.4
FvH4_5g08350 Fragaria vesca HOM05D005335 ORTHO05D006472 1.0e-17 94.0 172 59.9
FAN08G1274 Fragaria x ananassa HOM05D005335 ORTHO05D006472 1.0e-17 94.0 176 58.0
FAN18G1337 Fragaria x ananassa HOM05D005335 ORTHO05D006472 1.0e-17 94.0 172 59.9
Manes.14G051200 Manihot esculenta HOM05D005335 ORTHO05D006472 1.0e-17 94.0 142 66.9
THA.LOC104821517 Tarenaya hassleriana HOM05D005335 ORTHO05D006472 1.0e-17 94.0 150 63.3
vmacro19206 Vaccinium macrocarpon HOM05D005335 ORTHO05D006472 1.0e-17 94.0 160 51.9
BcaB05g23008 Brassica carinata HOM05D005335 ORTHO05D006472 1.4e-17 93.6 156 42.3
HanXRQChr09g0273241 Helianthus annuus HOM05D005335 ORTHO05D006472 1.4e-17 93.6 123 69.9
PSO017G0745 Papaver somniferum HOM05D005335 ORTHO05D006472 1.4e-17 93.6 180 48.3
PSO478G2775 Papaver somniferum HOM05D005335 ORTHO05D006472 1.4e-17 93.6 180 53.9
CSS0038536 Camellia sinensis var. sinensis HOM05D005335 ORTHO05D006472 3.0e-17 92.4 163 42.3
Prupe.5G150800 Prunus persica HOM05D005335 ORTHO05D006472 3.0e-17 92.4 153 64.1
AT3G48550 Arabidopsis thaliana HOM05D005335 ORTHO05D006472 3.9e-17 92.0 155 41.3
Thhalv10010777m.g Eutrema salsugineum HOM05D005335 ORTHO05D006472 3.9e-17 92.0 150 42.0
Gohir.D05G361600 Gossypium hirsutum HOM05D005335 ORTHO05D006472 3.9e-17 92.0 161 39.8
Gorai.009G431200 Gossypium raimondii HOM05D005335 ORTHO05D006472 3.9e-17 92.0 161 39.8
MD14G1156700 Malus domestica HOM05D005335 ORTHO05D006472 5.2e-17 91.7 172 58.7
Gohir.D08G258700 Gossypium hirsutum HOM05D005335 ORTHO05D006472 6.7e-17 91.3 159 42.1
BcaC07g39341 Brassica carinata HOM05D005335 ORTHO05D006472 8.8e-17 90.9 156 40.4
C08p23580 Brassica napus HOM05D005335 ORTHO05D006472 8.8e-17 90.9 156 40.4
BolC8t49988H Brassica oleracea HOM05D005335 ORTHO05D006472 8.8e-17 90.9 156 40.4
Sed0012251 Sechium edule HOM05D005335 ORTHO05D006472 8.8e-17 90.9 153 64.1
PGSC0003DMG400018091 Solanum tuberosum HOM05D005335 ORTHO05D006472 1.1e-16 90.5 132 65.9
MSTRG.11283 Avicennia marina HOM05D005335 ORTHO05D006472 1.5e-16 90.1 148 54.7
Nn4g22311 Nelumbo nucifera HOM05D005335 ORTHO05D006472 2.0e-16 89.7 124 72.6
THA.LOC104818185 Tarenaya hassleriana HOM05D005335 ORTHO05D006472 2.0e-16 89.7 145 60.0
AL5G28000 Arabidopsis lyrata HOM05D005335 ORTHO05D006472 2.6e-16 89.4 159 40.9
BcaC09g49876 Brassica carinata HOM05D005335 ORTHO05D006472 2.6e-16 89.4 158 60.8
Gorai.004G276200 Gossypium raimondii HOM05D005335 ORTHO05D006472 2.6e-16 89.4 139 46.0
Sc04g0000630 Simmondsia chinensis HOM05D005335 ORTHO05D006472 2.6e-16 89.4 116 48.3
Oeu023482.1 Olea europaea HOM05D005335 ORTHO05D006472 3.3e-16 89.0 126 62.7
GSVIVG01008545001 Vitis vinifera HOM05D005335 ORTHO05D006472 3.3e-16 89.0 86 90.7
Nitab4.5_0002403g0010 Nicotiana tabacum HOM05D005335 ORTHO05D006472 4.4e-16 88.6 173 56.6
DCAR_016388 Daucus carota HOM05D005335 ORTHO05D006472 5.7e-16 88.2 168 53.0
Nitab4.5_0000514g0170 Nicotiana tabacum HOM05D005335 ORTHO05D006472 5.7e-16 88.2 169 57.4
Carub.0005s1474 Capsella rubella HOM05D005335 ORTHO05D006472 7.4e-16 87.8 158 39.9
Actinidia25571 Actinidia chinensis HOM05D005335 ORTHO05D006472 1.3e-15 87.0 99 60.6
Sp5g13430 Schrenkiella parvula HOM05D005335 ORTHO05D006472 1.3e-15 87.0 113 46.0
CiPaw.12G043300 Carya illinoinensis HOM05D005335 ORTHO05D006472 1.7e-15 86.7 132 59.8
EL10Ac5g11411 Beta vulgaris HOM05D005335 ORTHO05D006472 2.8e-15 85.9 113 49.6
HanXRQChr16g0498141 Helianthus annuus HOM05D005335 ORTHO05D006472 2.8e-15 85.9 175 53.1
Peaxi162Scf00009g00007 Petunia axillaris HOM05D005335 ORTHO05D006472 2.8e-15 85.9 135 63.0
Aa31LG4G17170 Aethionema arabicum HOM05D005335 ORTHO05D006472 3.7e-15 85.5 104 48.1
BcaB01g00799 Brassica carinata HOM05D005335 ORTHO05D006472 3.7e-15 85.5 156 40.4
Rhsim12G0175000 Rhododendron simsii HOM05D005335 ORTHO05D006472 4.8e-15 85.1 158 50.6
Migut.I00507 Erythranthe guttata HOM05D005335 ORTHO05D006472 6.3e-15 84.7 174 54.6
MBI11_g05328_MAGBIO Magnolia biondii HOM05D001420 ORTHO05D002488 6.3e-15 84.7 139 60.4
Sopen03g032000 Solanum pennellii HOM05D005335 ORTHO05D006472 6.3e-15 84.7 86 86.0
Gohir.A04G026600 Gossypium hirsutum HOM05D005335 ORTHO05D006472 1.1e-14 84.0 123 47.2
Ah.11g045430 Amaranthus hybridus HOM05D005335 ORTHO05D006472 1.4e-14 83.6 113 47.8
Aqoxy3G00598 Aquilegia oxysepala HOM05D005335 ORTHO05D006472 2.4e-14 82.8 167 50.9
Solyc03g112920.1 Solanum lycopersicum HOM05D005335 ORTHO05D006472 2.4e-14 82.8 86 84.9
PSO478G4723 Papaver somniferum HOM05D005335 ORTHO05D006472 4.1e-14 82.0 84 77.4
Oeu045458.1 Olea europaea HOM05D005335 ORTHO05D006472 5.3e-14 81.6 170 52.4
Oeu045459.1 Olea europaea HOM05D005335 ORTHO05D006472 5.3e-14 81.6 170 52.4
Oeu005014.1 Olea europaea HOM05D005335 ORTHO05D006472 9.1e-14 80.9 122 59.0
Ah.04g153430 Amaranthus hybridus HOM05D005335 ORTHO05D006472 1.2e-13 80.5 112 47.3
Actinidia08873 Actinidia chinensis HOM05D001420 ORTHO05D002488 2.0e-13 79.7 144 44.4
Aqoxy5G03368 Aquilegia oxysepala HOM05D005335 ORTHO05D006472 2.0e-13 79.7 133 56.4
DCAR_007490 Daucus carota HOM05D005335 ORTHO05D006472 2.0e-13 79.7 149 37.6
PSO017G4217 Papaver somniferum HOM05D005335 ORTHO05D006472 2.0e-13 79.7 84 78.6
AUR62029609 Chenopodium quinoa HOM05D005335 ORTHO05D006472 5.9e-13 78.2 106 48.1
AUR62034828 Chenopodium quinoa HOM05D005335 ORTHO05D006472 1.7e-12 76.6 107 45.8
Dinv23148 Davidia involucrata HOM05D005335 ORTHO05D006472 1.7e-12 76.6 109 50.5
CARHR157350 Cardamine hirsuta HOM05D005335 ORTHO05D006472 3.8e-12 75.5 102 52.9
SGA_v2.0_scaffold161G37793 Striga asiatica HOM05D005335 ORTHO05D006472 1.5e-11 73.6 113 44.2
TWI23G0456 Tripterygium wilfordii HOM05D005335 ORTHO05D006472 3.2e-11 72.4 172 54.7
Migut.D01260 Erythranthe guttata HOM05D005335 ORTHO05D006472 5.5e-11 71.6 154 51.3
HPP92_009722 Vanilla planifolia HOM05D005335 ORTHO05D006472 5.5e-11 71.6 144 37.5
C01p32260 Brassica napus HOM05D005335 ORTHO05D006472 7.2e-11 71.2 158 57.6
THA.LOC104798946 Tarenaya hassleriana HOM05D005335 ORTHO05D006472 7.2e-11 71.2 146 50.7
Oeu030248.1 Olea europaea HOM05D005335 ORTHO05D006472 9.4e-11 70.9 157 52.9
HanXRQChr05g0155191 Helianthus annuus HOM05D005335 ORTHO05D006472 4.7e-10 68.6 156 56.4
CANSAT80G0357 Cannabis sativa HOM05D005335 ORTHO05D006472 6.1e-10 68.2 124 54.8
unitig_744.g24466 Utricularia gibba HOM05D005335 ORTHO05D006472 1.0e-09 67.4 150 53.3
SGA_v2.0_scaffold5G02870 Striga asiatica HOM05D005335 ORTHO05D006472 1.2e-08 63.9 123 56.1
Lj9P479T20 Lonicera japonica HOM05D005335 ORTHO05D006472 1.8e-06 56.6 69 87.0
SEGI_18714 Sequoiadendron giganteum HOM05D005335 ORTHO05D006472 4.1e-06 55.5 84 70.2


User provided reference genes

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