Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_26101_v3 Cicer arietinum L. HOM05D006563 ORTHO05D008154 1.9e-124 449.1 222 100.0
Medtr4g103300 Medicago truncatula HOM05D006563 ORTHO05D008154 3.2e-111 405.2 231 87.9
Psat4g066200 Pisum sativum HOM05D006563 ORTHO05D008154 1.3e-109 399.8 220 90.0
Lj4g0002806 Lotus japonicus HOM05D006563 ORTHO05D008154 4.8e-107 391.3 221 87.8
Phvul.003G211300 Phaseolus vulgaris HOM05D006563 ORTHO05D008154 4.8e-107 391.3 220 87.3
Dinv23146 Davidia involucrata HOM05D006563 ORTHO05D008154 9.7e-100 367.1 225 80.0
Glyma.05G048400 Glycine max HOM05D006563 ORTHO05D008154 6.3e-99 364.4 204 89.2
TAR374G0821 Trochodendron aralioides HOM05D006563 ORTHO05D008154 1.4e-98 363.2 225 80.4
GSVIVG01008544001 Vitis vinifera HOM05D006563 ORTHO05D008154 2.4e-98 362.5 230 79.6
Prupe.5G150900 Prunus persica HOM05D006563 ORTHO05D008154 4.1e-98 361.7 224 80.4
Manes.06G119700 Manihot esculenta HOM05D006563 ORTHO05D008154 9.0e-98 360.5 226 78.3
Ciclev10032657m.g Citrus clementina HOM05D006563 ORTHO05D008154 1.2e-97 360.1 228 79.8
FAN04G0682 Fragaria x ananassa HOM05D006563 ORTHO05D008154 2.0e-97 359.4 224 79.5
FvH4_5g08340 Fragaria vesca HOM05D006563 ORTHO05D008154 1.0e-96 357.1 224 78.6
FAN18G2834 Fragaria x ananassa HOM05D006563 ORTHO05D008154 1.0e-96 357.1 224 78.6
Potri.015G096400 Populus trichocarpa HOM05D006563 ORTHO05D008154 1.3e-96 356.7 228 78.5
FAN04G3009 Fragaria x ananassa HOM05D006563 ORTHO05D008154 1.7e-96 356.3 224 79.0
FAN13G1867 Fragaria x ananassa HOM05D006563 ORTHO05D008154 1.7e-96 356.3 224 79.0
MD14G1156900 Malus domestica HOM05D006563 ORTHO05D008154 2.2e-96 355.9 224 79.5
RcHm_v2.0_Chr7g0190121 Rosa chinensis HOM05D006563 ORTHO05D008154 2.2e-96 355.9 224 78.6
Nitab4.5_0003282g0060 Nicotiana tabacum HOM05D006563 ORTHO05D008154 2.9e-96 355.5 222 78.4
Atru.chr6.1794 Acer truncatum HOM05D006563 ORTHO05D008154 6.5e-96 354.4 224 78.1
Hma1.2p1_0426F.1_g150610 Hydrangea macrophylla HOM05D006563 ORTHO05D008154 9.4e-95 350.5 222 79.3
Duzib205G1898 Durio zibethinus HOM05D006563 ORTHO05D008154 1.6e-94 349.7 224 77.7
TWI39G0919 Tripterygium wilfordii HOM05D006563 ORTHO05D008154 1.6e-94 349.7 222 78.4
Cpa.g.sc13.115 Carica papaya HOM05D006563 ORTHO05D008154 2.7e-94 349.0 225 76.9
ClCG03G003770 Citrullus lanatus HOM05D006563 ORTHO05D008154 3.6e-94 348.6 223 74.9
MELO3C002362.2 Cucumis melo HOM05D006563 ORTHO05D008154 4.6e-94 348.2 223 74.4
Solyc03g111350.3 Solanum lycopersicum HOM05D006563 ORTHO05D008154 4.6e-94 348.2 228 77.6
Gorai.008G206400 Gossypium raimondii HOM05D006563 ORTHO05D008154 7.9e-94 347.4 226 78.3
Peaxi162Scf00089g00627 Petunia axillaris HOM05D006563 ORTHO05D008154 7.9e-94 347.4 227 75.8
PGSC0003DMG400015182 Solanum tuberosum HOM05D006563 ORTHO05D008154 1.0e-93 347.1 228 76.3
Gohir.D12G192100 Gossypium hirsutum HOM05D006563 ORTHO05D008154 2.3e-93 345.9 226 77.9
CAN.G352.13 Capsicum annuum HOM05D006563 ORTHO05D008154 3.9e-93 345.1 228 75.4
CsaV3_1G009660 Cucumis sativus L. HOM05D006563 ORTHO05D008154 3.9e-93 345.1 223 74.4
Thecc.03G129300 Theobroma cacao HOM05D006563 ORTHO05D008154 3.9e-93 345.1 224 77.7
Actinidia08872 Actinidia chinensis HOM05D006563 ORTHO05D008154 5.1e-93 344.7 220 77.3
Gohir.A12G189700 Gossypium hirsutum HOM05D006563 ORTHO05D008154 5.1e-93 344.7 226 77.4
Sopen03g030480 Solanum pennellii HOM05D006563 ORTHO05D008154 5.1e-93 344.7 227 74.9
CANSAT80G0303 Cannabis sativa HOM05D006563 ORTHO05D008154 6.7e-93 344.4 226 75.7
CSS0042372 Camellia sinensis var. sinensis HOM05D006563 ORTHO05D008154 1.5e-92 343.2 220 76.4
COL.COLO4_28130 Corchorus olitorius HOM05D006563 ORTHO05D008154 1.5e-92 343.2 224 78.1
Nitab4.5_0004750g0020 Nicotiana tabacum HOM05D006563 ORTHO05D008154 1.5e-92 343.2 228 75.4
Carub.0005s1473 Capsella rubella HOM05D006563 ORTHO05D008154 2.0e-92 342.8 223 75.3
Migut.D01965 Erythranthe guttata HOM05D006563 ORTHO05D008154 3.3e-92 342.0 226 75.7
SGA_v2.0_scaffold7G04149 Striga asiatica HOM05D006563 ORTHO05D008154 3.3e-92 342.0 225 75.6
AT3G48540 Arabidopsis thaliana HOM05D006563 ORTHO05D008154 7.4e-92 340.9 226 74.3
HanXRQChr13g0408701 Helianthus annuus HOM05D006563 ORTHO05D008154 9.7e-92 340.5 225 76.0
Sc04g0000640 Simmondsia chinensis HOM05D006563 ORTHO05D008154 1.3e-91 340.1 223 74.4
arahy.Tifrunner.gnm1.ann1.G9M8TR Arachis hypogaea HOM05D006563 ORTHO05D008154 2.2e-91 339.3 221 77.8
AL5G27990 Arabidopsis lyrata HOM05D006563 ORTHO05D008154 2.8e-91 339.0 225 73.8
QL10p002894 Quercus lobata HOM05D006563 ORTHO05D008154 4.8e-91 338.2 250 71.6
Aa31LG4G17160 Aethionema arabicum HOM05D006563 ORTHO05D008154 6.3e-91 337.8 231 71.9
Thhalv10010696m.g Eutrema salsugineum HOM05D006563 ORTHO05D008154 1.1e-90 337.0 225 71.6
Oeu036009.4 Olea europaea HOM05D006563 ORTHO05D008154 1.4e-90 336.7 225 75.1
Sabra15G0117200 Salix brachista HOM05D006563 ORTHO05D008154 2.4e-90 335.9 210 80.5
Eucgr.B00111 Eucalyptus grandis HOM05D006563 ORTHO05D008154 4.1e-90 335.1 237 72.6
Hund02442 Selenicereus undatus HOM05D006563 ORTHO05D008154 1.2e-89 333.6 229 72.5
Aqoxy5G03376 Aquilegia oxysepala HOM05D006563 ORTHO05D008154 1.5e-89 333.2 233 71.7
CARHR157340 Cardamine hirsuta HOM05D006563 ORTHO05D008154 1.5e-89 333.2 224 71.9
Nn4g22315 Nelumbo nucifera HOM05D006563 ORTHO05D008154 2.0e-89 332.8 209 78.5
Sp5g13440 Schrenkiella parvula HOM05D006563 ORTHO05D008154 2.0e-89 332.8 222 72.1
SalBow6G4201 Salvia bowleyana HOM05D006563 ORTHO05D008154 2.6e-89 332.4 225 72.0
SalBow6G4357 Salvia bowleyana HOM05D006563 ORTHO05D008154 2.6e-89 332.4 225 72.0
BcaB05g23009 Brassica carinata HOM05D006563 ORTHO05D008154 3.4e-89 332.0 227 71.4
A01p25680 Brassica napus HOM05D006563 ORTHO05D008154 1.0e-88 330.5 227 70.5
BraA01t02447Z Brassica rapa HOM05D006563 ORTHO05D008154 1.0e-88 330.5 227 70.5
PSO017G5417 Papaver somniferum HOM05D006563 ORTHO05D008154 1.0e-88 330.5 226 73.5
arahy.Tifrunner.gnm1.ann1.76974R Arachis hypogaea HOM05D006563 ORTHO05D008154 1.3e-88 330.1 234 73.9
BcaC09g49875 Brassica carinata HOM05D006563 ORTHO05D008154 1.3e-88 330.1 227 70.0
C01p32250 Brassica napus HOM05D006563 ORTHO05D008154 1.3e-88 330.1 227 70.0
Lsat_1_v5_gn_1_28920 Lactuca sativa HOM05D006563 ORTHO05D008154 1.3e-88 330.1 223 71.3
Sed0017169 Sechium edule HOM05D006563 ORTHO05D008154 1.7e-88 329.7 226 73.0
HPP92_025255 Vanilla planifolia HOM05D006563 ORTHO05D008154 1.7e-88 329.7 224 74.1
MBI07_g16949_MAGBIO Magnolia biondii HOM05D006563 ORTHO05D008154 2.2e-88 329.3 222 74.3
BolC1t03129H Brassica oleracea HOM05D006563 ORTHO05D008154 3.8e-88 328.6 227 69.6
MSTRG.9682 Avicennia marina HOM05D006563 ORTHO05D008154 6.5e-88 327.8 225 72.0
Oeu040847.2 Olea europaea HOM05D006563 ORTHO05D008154 1.1e-87 327.0 261 65.1
Rhsim12G0174600 Rhododendron simsii HOM05D006563 ORTHO05D008154 1.4e-87 326.6 229 74.2
Medtr4g057655 Medicago truncatula HOM05D006563 ORTHO05D008154 5.5e-87 324.7 225 76.0
FAN08G2924 Fragaria x ananassa HOM05D006563 ORTHO05D008154 7.2e-87 324.3 245 68.2
AUR62029612 Chenopodium quinoa HOM05D006563 ORTHO05D008154 3.6e-86 322.0 224 71.4
ATR0561G278 Amborella trichopoda HOM05D006563 ORTHO05D008154 1.0e-85 320.5 206 76.2
Cc09_g04000 Coffea canephora HOM05D006563 ORTHO05D008154 1.4e-85 320.1 173 85.5
EL10Ac5g11412 Beta vulgaris HOM05D006563 ORTHO05D008154 3.0e-85 318.9 210 74.8
Os01g0765000 Oryza sativa ssp. japonica HOM05D006563 ORTHO05D008154 3.0e-85 318.9 231 68.0
CiPaw.11G007100 Carya illinoinensis HOM05D006563 ORTHO05D008154 5.1e-85 318.2 223 71.3
CDE05G1358 Ceratophyllum demersum HOM05D006563 ORTHO05D008154 9.7e-84 313.9 207 73.4
AUR62034825 Chenopodium quinoa HOM05D006563 ORTHO05D008154 1.7e-83 313.2 206 74.3
VMungo1215G3263 Vigna mungo HOM05D006563 ORTHO05D008154 1.1e-82 310.5 171 88.9
PSO478G0702 Papaver somniferum HOM05D006563 ORTHO05D008154 5.3e-82 308.1 210 74.3
Medtr4g071665 Medicago truncatula HOM05D006563 ORTHO05D008154 1.6e-81 306.6 225 72.4
TPR.G19207 Trifolium pratense HOM05D006563 ORTHO05D008154 5.9e-81 304.7 152 96.7
unitig_46.g18474 Utricularia gibba HOM05D006563 ORTHO05D008154 5.9e-81 304.7 227 67.8
PGR044G0473 Punica granatum HOM05D006563 ORTHO05D008154 4.7e-78 295.0 224 68.8
Haze_07139 Corylus avellana HOM05D006563 ORTHO05D008154 3.0e-77 292.4 207 72.0
SEGI_38890 Sequoiadendron giganteum HOM05D006563 ORTHO05D008154 5.7e-76 288.1 239 61.5
Potri.012G097800 Populus trichocarpa HOM05D006563 ORTHO05D008154 2.8e-75 285.8 226 67.3
Pp3c2_32260 Physcomitrium patens HOM05D006563 ORTHO05D008154 2.2e-72 276.2 192 67.7
AagrBONN_evm.TU.Sc2ySwM_228.2386 Anthoceros agrestis HOM05D006563 ORTHO05D008154 1.0e-69 267.3 189 67.2
DCAR_016389 Daucus carota HOM05D006563 ORTHO05D008154 1.4e-69 266.9 236 58.9
Lalb_Chr13g0297241 Lupinus albus HOM05D006563 ORTHO05D008154 3.1e-66 255.8 154 83.8
vmacro16718 Vaccinium macrocarpon HOM05D006563 ORTHO05D008154 9.1e-66 254.2 328 48.5
SMO116G0330 Selaginella moellendorffii HOM05D006563 ORTHO05D008154 5.9e-65 251.5 147 79.6
Sc04g0000170 Simmondsia chinensis HOM05D006563 ORTHO05D008154 1.7e-64 250.0 209 64.1
Zm00001eb370270 Zea mays HOM05D006563 ORTHO05D008154 1.5e-63 246.9 228 57.9
Lj5A96G46 Lonicera japonica HOM05D006563 ORTHO05D008154 4.9e-59 231.9 145 82.1
Ah.11g044830 Amaranthus hybridus HOM05D006563 ORTHO05D008154 1.1e-58 230.7 221 56.1
Cc09_g03990 Coffea canephora HOM05D006563 ORTHO05D008154 1.6e-57 226.9 125 82.4
PRCOL_00002657 Prasinoderma coloniale HOM05D006563 ORTHO05D008154 4.5e-57 225.3 162 62.3
MCO04G397 Micromonas commoda HOM05D006563 ORTHO05D008154 4.9e-51 205.3 152 60.5
Cre19.g750897 Chlamydomonas reinhardtii HOM05D006563 ORTHO05D008154 1.2e-44 184.1 192 51.0
CBR_g19095 Chara braunii HOM05D006563 ORTHO05D008154 3.0e-40 169.5 134 61.2
Haze_26466 Corylus avellana HOM05D006563 ORTHO05D008154 3.6e-38 162.5 159 49.1
AL1G65740 Arabidopsis lyrata HOM05D006563 ORTHO05D008154 4.4e-28 129.0 63 92.1
SMO199G0092 Selaginella moellendorffii HOM05D006563 ORTHO05D008154 1.2e-25 120.9 86 66.3
SMO361G0344 Selaginella moellendorffii HOM05D006563 ORTHO05D008154 2.1e-25 120.2 63 82.5
Hma1.2p1_0426F.1_g150620 Hydrangea macrophylla HOM05D006563 ORTHO05D008154 3.9e-24 115.9 68 85.3
MD06G1141700 Malus domestica HOM05D006563 ORTHO05D008154 4.7e-22 109.0 144 45.8
Hma1.2p1_0426F.1_g150600 Hydrangea macrophylla HOM05D006563 ORTHO05D008154 4.4e-20 102.4 89 60.7
SEGI_22016 Sequoiadendron giganteum HOM05D006563 ORTHO05D008154 9.3e-18 94.7 118 44.9
Lalb_Chr14g0365481 Lupinus albus HOM05D006563 ORTHO05D239264 1.6e-06 57.4 39 69.2


User provided reference genes

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