Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_26082_v3 Cicer arietinum L. HOM05D009584 ORTHO05D011650 3.7e-168 594.7 289 100.0
TWI74G1173 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 5.1e-16 89.4 148 35.8
TWI09G0364 Tripterygium wilfordii HOM05D000003 ORTHO05D000167 1.4e-13 81.3 241 30.3
TWI38G0639 Tripterygium wilfordii HOM05D000003 ORTHO05D000167 2.4e-13 80.5 210 31.4
Lj2g0001240 Lotus japonicus HOM05D000003 ORTHO05D000167 4.0e-13 79.7 212 25.5
QL05p060814 Quercus lobata HOM05D000003 ORTHO05D000167 3.4e-12 76.6 140 35.0
CSS0031955 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000167 3.8e-11 73.2 197 24.9
CANSAT35G1937 Cannabis sativa HOM05D000003 ORTHO05D000004 1.1e-10 71.6 298 24.5
TWI14G0340 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 1.1e-10 71.6 204 27.5
TWI31G1374 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 1.1e-10 71.6 204 27.5
Medtr4g069580 Medicago truncatula HOM05D009584 ORTHO05D011650 1.4e-10 71.2 121 31.4
Medtr4g118020 Medicago truncatula HOM05D009584 ORTHO05D011650 1.4e-10 71.2 214 28.5
TWI32G0681 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 1.4e-10 71.2 204 27.0
TWI53G0004 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 1.4e-10 71.2 204 27.0
CANSAT11G1229 Cannabis sativa HOM05D000003 ORTHO05D000004 1.9e-10 70.9 148 33.1
Ca_05450_v3 Cicer arietinum L. HOM05D009584 ORTHO05D011650 1.9e-10 70.9 124 37.1
TWI12G0325 Tripterygium wilfordii HOM05D000003 ORTHO05D000167 5.4e-10 69.3 148 28.4
TWI77G0377 Tripterygium wilfordii HOM05D000003 ORTHO05D000167 5.4e-10 69.3 148 33.1
CANSAT64G0538 Cannabis sativa HOM05D000003 ORTHO05D000167 7.1e-10 68.9 249 28.1
CiPaw.11G082900 Carya illinoinensis HOM05D000003 ORTHO05D000004 9.3e-10 68.6 288 21.9
CSS0031820 Camellia sinensis var. sinensis HOM05D000698 ORTHO05D000004 1.2e-09 68.2 136 30.9
QL11p009033 Quercus lobata HOM05D000003 ORTHO05D000004 1.2e-09 68.2 181 26.5
CANSAT78G2307 Cannabis sativa HOM05D000003 ORTHO05D000167 2.1e-09 67.4 158 31.0
CiPaw.10G104100 Carya illinoinensis HOM05D000003 ORTHO05D000167 2.1e-09 67.4 142 29.6
Lj4g0011977 Lotus japonicus HOM05D000003 ORTHO05D000167 2.1e-09 67.4 150 28.7
QL12p021712 Quercus lobata HOM05D000003 ORTHO05D000167 2.7e-09 67.0 139 28.1
CANSAT78G1893 Cannabis sativa HOM05D000003 ORTHO05D000167 3.5e-09 66.6 146 34.2
Haze_13551 Corylus avellana HOM05D000003 ORTHO05D000167 4.6e-09 66.2 160 28.1
QL93p0138_0008 Quercus lobata HOM05D000003 ORTHO05D000167 7.8e-09 65.5 150 30.0
CANSAT25G3211 Cannabis sativa HOM05D000003 ORTHO05D000167 1.0e-08 65.1 183 26.2
Haze_13874 Corylus avellana HOM05D016406 ORTHO05D000167 1.0e-08 65.1 210 27.1
CSS0016328 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000167 1.3e-08 64.7 197 22.3
CANSAT01G0793 Cannabis sativa HOM05D000003 ORTHO05D000004 1.3e-08 64.7 235 26.0
CANSAT25G2465 Cannabis sativa HOM05D000003 ORTHO05D000167 1.3e-08 64.7 127 30.7
Lj2g0023446 Lotus japonicus HOM05D000003 ORTHO05D000004 1.3e-08 64.7 156 32.1
Prupe.6G203400 Prunus persica HOM05D000003 ORTHO05D000167 1.3e-08 64.7 142 31.0
CANSAT11G1896 Cannabis sativa HOM05D000003 ORTHO05D000167 1.7e-08 64.3 127 31.5
Dinv08495 Davidia involucrata HOM05D000003 ORTHO05D000167 1.7e-08 64.3 140 30.7
Duzib132G0669 Durio zibethinus HOM05D000003 ORTHO05D000167 1.7e-08 64.3 157 28.0
QL05p065428 Quercus lobata HOM05D000003 ORTHO05D000004 1.7e-08 64.3 205 23.9
TWI77G0924 Tripterygium wilfordii HOM05D000003 ORTHO05D000167 1.7e-08 64.3 187 27.3
QL08p031025 Quercus lobata HOM05D000003 ORTHO05D000004 2.3e-08 63.9 279 24.4
CANSAT11G2130 Cannabis sativa HOM05D000003 ORTHO05D000167 3.0e-08 63.5 127 29.9
Haze_05255 Corylus avellana HOM05D000111 ORTHO05D001334 3.0e-08 63.5 164 30.5
QL06p048711 Quercus lobata HOM05D000027 ORTHO05D000066 3.0e-08 63.5 146 32.2
QL09p001270 Quercus lobata HOM05D000003 ORTHO05D000167 3.0e-08 63.5 150 27.3
TWI23G0529 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 3.9e-08 63.2 198 23.7
EL10Ac2g03044 Beta vulgaris HOM05D000003 ORTHO05D000006 5.1e-08 62.8 148 28.4
TWI75G0193 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 5.1e-08 62.8 198 23.7
Haze_19506 Corylus avellana HOM05D000003 ORTHO05D000167 6.6e-08 62.4 130 30.8
CiPaw.16G012000 Carya illinoinensis HOM05D000003 ORTHO05D000006 8.7e-08 62.0 139 29.5
AUR62039323 Chenopodium quinoa HOM05D000003 ORTHO05D000167 8.7e-08 62.0 196 23.0
AUR62026504 Chenopodium quinoa HOM05D000003 ORTHO05D000167 1.1e-07 61.6 120 30.8
QL10p030412 Quercus lobata HOM05D000003 ORTHO05D000167 1.5e-07 61.2 263 25.9
Lj3g0000351 Lotus japonicus HOM05D027754 ORTHO05D000167 1.9e-07 60.8 118 30.5
TWI18G1127 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 1.9e-07 60.8 167 28.1
EL10Ac8g20356 Beta vulgaris HOM05D004408 ORTHO05D000006 2.5e-07 60.5 207 26.6
Duzib205G0833 Durio zibethinus HOM05D000003 ORTHO05D000167 2.5e-07 60.5 140 33.6
Lj3g0008687 Lotus japonicus HOM05D027754 ORTHO05D000167 2.5e-07 60.5 167 21.6
Lj6g0001642 Lotus japonicus HOM05D000003 ORTHO05D000167 2.5e-07 60.5 121 28.1
TWI23G0127 Tripterygium wilfordii HOM05D000003 ORTHO05D000167 2.5e-07 60.5 214 25.7
Lj4C842T3 Lonicera japonica HOM05D000003 ORTHO05D000167 3.3e-07 60.1 127 30.7
CANSAT01G2533 Cannabis sativa HOM05D000003 ORTHO05D000167 4.3e-07 59.7 153 25.5
CANSAT11G0460 Cannabis sativa HOM05D000003 ORTHO05D000167 4.3e-07 59.7 188 26.1
AUR62013413 Chenopodium quinoa HOM05D000003 ORTHO05D000167 4.3e-07 59.7 207 23.7
QL11p050287 Quercus lobata HOM05D000003 ORTHO05D000167 4.3e-07 59.7 130 29.2
Cfa000480 Carpinus fangiana HOM05D000003 ORTHO05D000167 5.6e-07 59.3 86 36.0
QL07p015088 Quercus lobata HOM05D000003 ORTHO05D000167 5.6e-07 59.3 146 28.1
QL11p013009 Quercus lobata HOM05D000003 ORTHO05D000167 5.6e-07 59.3 156 29.5
CANSAT64G0505 Cannabis sativa HOM05D000003 ORTHO05D000167 7.3e-07 58.9 129 33.3
QL05p005727 Quercus lobata HOM05D000432 ORTHO05D000320 7.3e-07 58.9 111 33.3
MSTRG.22439 Avicennia marina HOM05D000042 ORTHO05D000167 9.6e-07 58.5 176 23.3
CANSAT25G1969 Cannabis sativa HOM05D000003 ORTHO05D000004 9.6e-07 58.5 186 25.8
CANSAT64G1154 Cannabis sativa HOM05D000003 ORTHO05D000004 9.6e-07 58.5 140 31.4
Haze_23165 Corylus avellana HOM05D000003 ORTHO05D000167 9.6e-07 58.5 135 28.9
QL01p044414 Quercus lobata HOM05D000414 ORTHO05D000276 9.6e-07 58.5 127 29.1
CANSAT21G2025 Cannabis sativa HOM05D000003 ORTHO05D000167 1.3e-06 58.2 159 29.6
CANSAT78G1758 Cannabis sativa HOM05D000003 ORTHO05D000004 1.3e-06 58.2 278 23.7
QL01p036379 Quercus lobata HOM05D000003 ORTHO05D000004 1.3e-06 58.2 165 26.1
CANSAT35G1027 Cannabis sativa HOM05D000003 ORTHO05D000004 1.6e-06 57.8 159 27.0
CANSAT64G1764 Cannabis sativa HOM05D000003 ORTHO05D000167 1.6e-06 57.8 151 27.8
CANSAT01G1851 Cannabis sativa HOM05D000003 ORTHO05D000167 2.1e-06 57.4 147 29.9
CANSAT21G2622 Cannabis sativa HOM05D000003 ORTHO05D000004 2.1e-06 57.4 157 29.9
CANSAT78G0894 Cannabis sativa HOM05D000003 ORTHO05D000167 2.1e-06 57.4 127 30.7
CANSAT78G2409 Cannabis sativa HOM05D000003 ORTHO05D000004 2.1e-06 57.4 122 31.1
Sed0013469 Sechium edule HOM05D000003 ORTHO05D000167 2.1e-06 57.4 149 28.2
Atru.chr10.970 Acer truncatum HOM05D000003 ORTHO05D000167 2.8e-06 57.0 133 28.6
CANSAT01G1104 Cannabis sativa HOM05D000003 ORTHO05D000167 2.8e-06 57.0 151 27.2
CANSAT11G1818 Cannabis sativa HOM05D000003 ORTHO05D000004 2.8e-06 57.0 123 33.3
CANSAT64G0950 Cannabis sativa HOM05D000003 ORTHO05D000167 2.8e-06 57.0 214 25.2
Haze_25213 Corylus avellana HOM05D000335 ORTHO05D001251 2.8e-06 57.0 120 30.8
Haze_27622 Corylus avellana HOM05D000003 ORTHO05D000167 2.8e-06 57.0 170 26.5
Haze_01518 Corylus avellana HOM05D000003 ORTHO05D044804 3.6e-06 56.6 157 28.7
Haze_16052 Corylus avellana HOM05D033627 ORTHO05D034205 3.6e-06 56.6 98 35.7
CANSAT01G2456 Cannabis sativa HOM05D000003 ORTHO05D000167 4.8e-06 56.2 131 29.8
QL02p082090 Quercus lobata HOM05D000003 ORTHO05D000167 4.8e-06 56.2 148 27.7
CANSAT56G2069 Cannabis sativa HOM05D000003 ORTHO05D000167 8.1e-06 55.5 188 27.1
Ciclev10007098m.g Citrus clementina HOM05D000003 ORTHO05D000167 8.1e-06 55.5 143 26.6
Dinv21289 Davidia involucrata HOM05D000079 ORTHO05D000211 8.1e-06 55.5 180 25.0
QL07p036969 Quercus lobata HOM05D000003 ORTHO05D000167 8.1e-06 55.5 101 32.7


User provided reference genes

Program Settings