Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_26053_v3 Cicer arietinum L. HOM05D000566 ORTHO05D008456 9.0e-72 273.5 137 100.0
Psat7g118880 Pisum sativum HOM05D000566 ORTHO05D008456 7.9e-68 260.4 137 93.4
Lj4g0018718 Lotus japonicus HOM05D000566 ORTHO05D008456 2.1e-65 252.3 137 90.5
Phvul.003G058300 Phaseolus vulgaris HOM05D000566 ORTHO05D008456 4.8e-65 251.1 134 92.5
VMungo0251G1655 Vigna mungo HOM05D000566 ORTHO05D008456 9.0e-64 246.9 135 89.6
Lalb_Chr16g0384251 Lupinus albus HOM05D000566 ORTHO05D008456 1.2e-63 246.5 140 89.3
Lalb_Chr05g0218771 Lupinus albus HOM05D000566 ORTHO05D008456 7.6e-63 243.8 137 90.5
Glyma.13G171000 Glycine max HOM05D000566 ORTHO05D008456 1.3e-62 243.0 136 91.2
RcHm_v2.0_Chr5g0010321 Rosa chinensis HOM05D000566 ORTHO05D008456 1.7e-62 242.7 137 85.4
CiPaw.09G068300 Carya illinoinensis HOM05D000566 ORTHO05D008456 4.9e-62 241.1 137 86.9
Gohir.A06G134006 Gossypium hirsutum HOM05D000566 ORTHO05D008456 6.4e-62 240.7 141 86.5
CANSAT35G0195 Cannabis sativa HOM05D000566 ORTHO05D008456 1.4e-61 239.6 133 91.7
Thecc.06G173200 Theobroma cacao HOM05D000566 ORTHO05D008456 2.5e-61 238.8 141 85.1
Medtr4g087740 Medicago truncatula HOM05D000566 ORTHO05D008456 3.2e-61 238.4 137 87.6
MELO3C007220.2 Cucumis melo HOM05D000566 ORTHO05D008456 4.2e-61 238.0 140 87.9
Ciclev10016472m.g Citrus clementina HOM05D000566 ORTHO05D008456 9.3e-61 236.9 140 85.7
FAN25G1525 Fragaria x ananassa HOM05D000566 ORTHO05D000686 9.3e-61 236.9 137 83.9
Gohir.D06G136400 Gossypium hirsutum HOM05D000566 ORTHO05D008456 9.3e-61 236.9 141 85.1
COL.COLO4_31322 Corchorus olitorius HOM05D000566 ORTHO05D000686 1.2e-60 236.5 141 85.1
TWI38G1860 Tripterygium wilfordii HOM05D000566 ORTHO05D008456 1.2e-60 236.5 139 84.9
Manes.16G037200 Manihot esculenta HOM05D000566 ORTHO05D008456 1.6e-60 236.1 142 85.2
Atru.chr10.1700 Acer truncatum HOM05D000566 ORTHO05D008456 2.1e-60 235.7 140 85.7
FvH4_3g07991 Fragaria vesca HOM05D000566 ORTHO05D008456 2.1e-60 235.7 137 83.9
Gorai.010G158600 Gossypium raimondii HOM05D000566 ORTHO05D008456 2.7e-60 235.3 141 84.4
TPR.G16280 Trifolium pratense HOM05D000566 ORTHO05D008456 2.7e-60 235.3 136 88.2
Duzib192G0190 Durio zibethinus HOM05D000566 ORTHO05D008456 4.6e-60 234.6 141 85.8
FAN11G2813 Fragaria x ananassa HOM05D000566 ORTHO05D008456 4.6e-60 234.6 137 83.2
Haze_06259 Corylus avellana HOM05D000566 ORTHO05D008456 6.0e-60 234.2 138 85.5
Medtr4g087750 Medicago truncatula HOM05D000566 ORTHO05D008456 6.0e-60 234.2 135 88.1
Sed0006380 Sechium edule HOM05D000566 ORTHO05D008456 6.0e-60 234.2 140 83.6
FAN21G0306 Fragaria x ananassa HOM05D000566 ORTHO05D008456 1.8e-59 232.6 137 81.8
Potri.011G064600 Populus trichocarpa HOM05D000566 ORTHO05D008456 3.9e-59 231.5 140 84.3
Prupe.4G059300 Prunus persica HOM05D000566 ORTHO05D008456 3.9e-59 231.5 137 81.8
Sc05g0007190 Simmondsia chinensis HOM05D000566 ORTHO05D008456 3.9e-59 231.5 123 91.9
QL05p046292 Quercus lobata HOM05D000566 ORTHO05D008456 6.7e-59 230.7 125 89.6
Eucgr.E02712 Eucalyptus grandis HOM05D000566 ORTHO05D008456 8.7e-59 230.3 130 87.7
Dinv04627 Davidia involucrata HOM05D000566 ORTHO05D008456 1.1e-58 229.9 139 82.0
ClCG01G023650 Citrullus lanatus HOM05D000566 ORTHO05D008456 1.5e-58 229.6 142 82.4
MD10G1282600 Malus domestica HOM05D000566 ORTHO05D008456 1.5e-58 229.6 137 81.0
Hund23960 Selenicereus undatus HOM05D000566 ORTHO05D008456 1.9e-58 229.2 126 89.7
AUR62036584 Chenopodium quinoa HOM05D000566 ORTHO05D008456 3.3e-58 228.4 131 87.0
Ah.09g233690 Amaranthus hybridus HOM05D000566 ORTHO05D008456 7.4e-58 227.3 135 84.4
Actinidia16807 Actinidia chinensis HOM05D000566 ORTHO05D008456 9.6e-58 226.9 139 81.3
TAR626G0526 Trochodendron aralioides HOM05D000566 ORTHO05D008456 1.3e-57 226.5 138 81.9
unitig_699.g19342 Utricularia gibba HOM05D000566 ORTHO05D008456 1.3e-57 226.5 127 89.8
GSVIVG01021190001 Vitis vinifera HOM05D000566 ORTHO05D008456 1.3e-57 226.5 122 90.2
Cfa000591 Carpinus fangiana HOM05D000566 ORTHO05D008456 1.6e-57 226.1 135 84.4
Oeu039926.1 Olea europaea HOM05D000566 ORTHO05D008456 2.8e-57 225.3 131 87.8
Peaxi162Scf01479g00012 Petunia axillaris HOM05D000566 ORTHO05D008456 3.7e-57 224.9 122 88.5
Cc02_g14640 Coffea canephora HOM05D000566 ORTHO05D008456 4.8e-57 224.6 122 91.0
Hma1.2p1_0437F.1_g152980 Hydrangea macrophylla HOM05D000566 ORTHO05D008456 4.8e-57 224.6 139 81.3
PSO675G8854 Papaver somniferum HOM05D000566 ORTHO05D008456 4.8e-57 224.6 122 88.5
CAN.G337.143 Capsicum annuum HOM05D000566 ORTHO05D008456 8.2e-57 223.8 122 89.3
Thhalv10009067m.g Eutrema salsugineum HOM05D000566 ORTHO05D008456 8.2e-57 223.8 122 86.9
Sabra11G0046400 Salix brachista HOM05D000566 ORTHO05D008456 1.1e-56 223.4 139 79.9
PSO541G3700 Papaver somniferum HOM05D000566 ORTHO05D008456 1.4e-56 223.0 122 87.7
Sp1g24970 Schrenkiella parvula HOM05D000566 ORTHO05D008456 1.4e-56 223.0 122 86.1
THA.LOC104814247 Tarenaya hassleriana HOM05D000566 ORTHO05D008456 1.4e-56 223.0 122 87.7
PGSC0003DMG401022314 Solanum tuberosum HOM05D000566 ORTHO05D008456 2.4e-56 222.2 122 88.5
Carub.0001s2723 Capsella rubella HOM05D000566 ORTHO05D008456 3.1e-56 221.9 138 78.3
Lsat_1_v5_gn_4_50020 Lactuca sativa HOM05D000566 ORTHO05D008456 4.0e-56 221.5 136 82.4
Migut.M01050 Erythranthe guttata HOM05D000566 ORTHO05D008456 5.3e-56 221.1 135 82.2
HanXRQChr07g0186931 Helianthus annuus HOM05D000566 ORTHO05D008456 5.3e-56 221.1 131 84.7
SGA_v2.0_scaffold1G00030 Striga asiatica HOM05D000566 ORTHO05D008456 5.3e-56 221.1 140 82.1
Aqoxy1G03201 Aquilegia oxysepala HOM05D000566 ORTHO05D008456 6.9e-56 220.7 122 87.7
AT1G29040 Arabidopsis thaliana HOM05D000566 ORTHO05D008456 9.0e-56 220.3 122 85.2
MSTRG.7396 Avicennia marina HOM05D000566 ORTHO05D008456 9.0e-56 220.3 127 89.0
BcaB03g13911 Brassica carinata HOM05D000566 ORTHO05D008456 1.2e-55 219.9 122 86.1
PGR042G3563 Punica granatum HOM05D000566 ORTHO05D008456 1.2e-55 219.9 137 78.1
vmacro03936 Vaccinium macrocarpon HOM05D000566 ORTHO05D008456 1.5e-55 219.5 136 81.6
AL1G42750 Arabidopsis lyrata HOM05D000566 ORTHO05D008456 2.0e-55 219.2 122 84.4
A07p11000 Brassica napus HOM05D000566 ORTHO05D008456 2.6e-55 218.8 122 85.2
BraA07t28892Z Brassica rapa HOM05D000566 ORTHO05D008456 2.6e-55 218.8 122 85.2
SalBow8G0706 Salvia bowleyana HOM05D000566 ORTHO05D008456 2.6e-55 218.8 135 83.0
BcaC06g35392 Brassica carinata HOM05D000566 ORTHO05D008456 3.4e-55 218.4 139 77.0
Sopen07g032890 Solanum pennellii HOM05D000566 ORTHO05D008456 3.4e-55 218.4 122 86.9
CARHR028250 Cardamine hirsuta HOM05D000566 ORTHO05D008456 4.5e-55 218.0 122 84.4
Rhsim13G0191700 Rhododendron simsii HOM05D000566 ORTHO05D000686 4.5e-55 218.0 139 77.7
Solyc07g064690.1 Solanum lycopersicum HOM05D000566 ORTHO05D008456 4.5e-55 218.0 122 86.9
C07p16640 Brassica napus HOM05D000566 ORTHO05D008456 1.0e-54 216.9 122 83.6
DCAR_004017 Daucus carota HOM05D000566 ORTHO05D008456 1.3e-54 216.5 125 84.0
BolC7t42164H Brassica oleracea HOM05D000566 ORTHO05D008456 1.7e-54 216.1 139 76.3
ECA234G0195 Erigeron canadensis HOM05D000566 ORTHO05D000686 2.2e-54 215.7 122 85.2
MBI06_g25985_MAGBIO Magnolia biondii HOM05D000566 ORTHO05D008456 2.2e-54 215.7 129 80.6
CDE02G2902 Ceratophyllum demersum HOM05D000566 ORTHO05D008456 6.5e-54 214.2 137 78.1
HPP92_024140 Vanilla planifolia HOM05D000566 ORTHO05D008456 5.5e-53 211.1 137 78.1
EL10Ac8g20507 Beta vulgaris HOM05D000566 ORTHO05D008456 9.3e-53 210.3 173 68.2
Pp3c23_18520 Physcomitrium patens HOM05D000566 ORTHO05D008456 1.2e-52 209.9 136 74.3
Zm00001eb162000 Zea mays HOM05D000566 ORTHO05D008456 1.0e-51 206.8 134 74.6
Os01g0613300 Oryza sativa ssp. japonica HOM05D000566 ORTHO05D008456 2.3e-51 205.7 142 70.4
Pp3c24_14610 Physcomitrium patens HOM05D000566 ORTHO05D008456 8.7e-51 203.8 129 74.4
Nitab4.5_0000206g0050 Nicotiana tabacum HOM05D000566 ORTHO05D008456 3.3e-50 201.8 122 82.0
Peaxi162Scf01070g00226 Petunia axillaris HOM05D000566 ORTHO05D008456 5.7e-50 201.1 173 62.4
Lj2A297T108 Lonicera japonica HOM05D000566 ORTHO05D008456 1.3e-49 199.9 173 61.8
Aa31LG6G11510 Aethionema arabicum HOM05D000566 ORTHO05D008456 2.2e-49 199.1 146 69.9
Glyma.13G170900 Glycine max HOM05D000566 ORTHO05D008456 8.2e-49 197.2 126 76.2
ATR0602G168 Amborella trichopoda HOM05D000566 ORTHO05D008456 5.9e-47 191.0 137 70.1
AUR62031167 Chenopodium quinoa HOM05D000566 ORTHO05D008456 6.5e-46 187.6 99 93.9
VMungo0251G1536 Vigna mungo HOM05D000566 ORTHO05D008456 2.5e-45 185.7 126 69.8
Glyma.04G136400 Glycine max HOM05D000566 ORTHO05D008456 9.4e-45 183.7 122 72.1
SEGI_28108 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 3.9e-43 178.3 124 66.9
arahy.Tifrunner.gnm1.ann1.AZL87G Arachis hypogaea HOM05D000566 ORTHO05D008456 5.7e-42 174.5 122 68.0
arahy.Tifrunner.gnm1.ann1.441UHN Arachis hypogaea HOM05D000566 ORTHO05D008456 1.3e-41 173.3 122 67.2
AagrBONN_evm.TU.Sc2ySwM_344.3192 Anthoceros agrestis HOM05D000566 ORTHO05D008456 7.7e-39 164.1 106 73.6
CsaV3_6G050800 Cucumis sativus L. HOM05D000566 ORTHO05D008456 4.7e-36 154.8 97 82.5
Nn1g04373 Nelumbo nucifera HOM05D000566 ORTHO05D008456 2.2e-33 146.0 94 79.8
Cpa.g.sc7.62 Carica papaya HOM05D000566 ORTHO05D008456 8.2e-33 144.1 83 83.1
FAN16G3553 Fragaria x ananassa HOM05D000566 ORTHO05D008456 2.0e-31 139.4 87 79.3
Nitab4.5_0010317g0010 Nicotiana tabacum HOM05D000566 ORTHO05D008456 2.2e-30 136.0 165 49.7
TWI38G1453 Tripterygium wilfordii HOM05D000566 ORTHO05D008456 1.6e-28 129.8 132 57.6
MCO02G300 Micromonas commoda HOM05D000566 ORTHO05D008456 3.9e-27 125.2 121 53.7
PRCOL_00004523 Prasinoderma coloniale HOM05D000566 ORTHO05D008456 2.2e-22 109.4 121 48.8
Glyma.04G136500 Glycine max HOM05D000566 ORTHO05D008456 8.0e-20 100.9 71 69.0
TWI38G2220 Tripterygium wilfordii HOM05D000566 ORTHO05D008456 1.4e-19 100.1 152 47.4
CSS0045665 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D008456 1.4e-16 90.1 45 91.1
SEGI_06418 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 1.7e-14 83.2 115 47.0
SEGI_18524 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 1.7e-14 83.2 56 73.2
CSS0020746 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D008456 8.5e-14 80.9 58 70.7
CSS0029795 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D008456 8.5e-14 80.9 58 70.7
Sed0003601 Sechium edule HOM05D000566 ORTHO05D008456 7.2e-13 77.8 114 43.9
Cpa.g.sc7.61 Carica papaya HOM05D000566 ORTHO05D008456 3.6e-12 75.5 37 91.9
SEGI_34869 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 3.7e-09 65.5 42 69.0
MBI06_g25984_MAGBIO Magnolia biondii HOM05D000566 ORTHO05D008456 1.6e-07 60.1 52 59.6


User provided reference genes

Program Settings