Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_26026_v3 Cicer arietinum L. HOM05D005843 ORTHO05D007781 2.7e-291 1004.6 507 100.0
Medtr7g060680 Medicago truncatula HOM05D005843 ORTHO05D007781 1.4e-266 922.5 511 90.4
TPR.G23290 Trifolium pratense HOM05D005843 ORTHO05D007781 6.6e-261 903.7 510 89.2
Psat5g101400 Pisum sativum HOM05D005843 ORTHO05D007781 7.5e-257 890.2 510 87.3
Glyma.07G131100 Glycine max HOM05D005843 ORTHO05D007781 1.4e-231 806.2 510 77.8
Lalb_Chr19g0125371 Lupinus albus HOM05D005843 ORTHO05D007781 6.2e-227 790.8 510 77.3
VMungo1383G2898 Vigna mungo HOM05D005843 ORTHO05D007781 2.9e-224 781.9 510 75.3
Phvul.008G100900 Phaseolus vulgaris HOM05D005843 ORTHO05D007781 3.8e-224 781.6 510 76.3
arahy.Tifrunner.gnm1.ann1.JAB43P Arachis hypogaea HOM05D005843 ORTHO05D007781 4.5e-209 731.5 513 72.5
Glyma.18G179500 Glycine max HOM05D005843 ORTHO05D007781 2.4e-207 725.7 507 72.6
CiPaw.09G192200 Carya illinoinensis HOM05D005843 ORTHO05D007781 9.6e-204 713.8 511 67.5
Haze_20785 Corylus avellana HOM05D005843 ORTHO05D007781 2.4e-202 709.1 525 65.9
QL06p005681 Quercus lobata HOM05D005843 ORTHO05D007781 3.2e-199 698.7 510 67.1
Atru.chr8.1969 Acer truncatum HOM05D005843 ORTHO05D007781 8.7e-197 690.6 511 66.3
GSVIVG01034179001 Vitis vinifera HOM05D005843 ORTHO05D007781 6.2e-195 684.5 511 65.8
QL11p021821 Quercus lobata HOM05D005843 ORTHO05D007781 1.8e-194 682.9 552 61.6
TAR633G1568 Trochodendron aralioides HOM05D005843 ORTHO05D007781 1.0e-192 677.2 512 65.6
Gorai.006G173000 Gossypium raimondii HOM05D005843 ORTHO05D007781 3.5e-190 668.7 511 64.6
Gohir.D09G151700 Gossypium hirsutum HOM05D005843 ORTHO05D007781 1.0e-189 667.2 511 64.4
Gohir.A09G156300 Gossypium hirsutum HOM05D005843 ORTHO05D007781 1.3e-189 666.8 511 64.2
Manes.17G047400 Manihot esculenta HOM05D005843 ORTHO05D007781 3.0e-189 665.6 512 64.3
Hma1.2p1_1513F.1_g288040 Hydrangea macrophylla HOM05D005843 ORTHO05D007781 5.1e-189 664.8 508 64.0
Thecc.05G040300 Theobroma cacao HOM05D005843 ORTHO05D007781 5.7e-188 661.4 511 64.8
Prupe.6G254200 Prunus persica HOM05D005843 ORTHO05D007781 1.6e-187 659.8 517 64.6
MD12G1140900 Malus domestica HOM05D005843 ORTHO05D007781 4.8e-187 658.3 515 63.5
FAN14G2296 Fragaria x ananassa HOM05D005843 ORTHO05D007781 6.3e-187 657.9 511 64.0
Eucgr.K03141 Eucalyptus grandis HOM05D005843 ORTHO05D007781 1.4e-186 656.8 509 62.5
RcHm_v2.0_Chr3g0466751 Rosa chinensis HOM05D005843 ORTHO05D007781 1.4e-186 656.8 509 64.4
Duzib128G1977 Durio zibethinus HOM05D005843 ORTHO05D007781 4.1e-186 655.2 533 62.1
FAN05G5617 Fragaria x ananassa HOM05D005843 ORTHO05D007781 5.3e-186 654.8 514 63.6
Lj3g0024665 Lotus japonicus HOM05D005843 ORTHO05D007781 1.2e-185 653.7 452 73.5
Nn8g39667 Nelumbo nucifera HOM05D005843 ORTHO05D007781 1.5e-185 653.3 511 63.4
Cc06_g02690 Coffea canephora HOM05D005843 ORTHO05D007781 2.0e-185 652.9 510 61.6
PSO339G2649 Papaver somniferum HOM05D005843 ORTHO05D007781 1.4e-183 646.7 512 62.5
MD04G1127500 Malus domestica HOM05D005843 ORTHO05D007781 9.4e-183 644.0 510 63.9
MELO3C003129.2 Cucumis melo HOM05D005843 ORTHO05D007781 4.6e-182 641.7 511 61.8
CsaV3_4G024980 Cucumis sativus L. HOM05D005843 ORTHO05D007781 1.0e-181 640.6 512 61.9
TWI38G1602 Tripterygium wilfordii HOM05D005843 ORTHO05D007781 1.4e-181 640.2 512 61.3
Hund24578 Selenicereus undatus HOM05D005843 ORTHO05D007781 3.0e-181 639.0 515 61.0
Lj3C968G10 Lonicera japonica HOM05D005843 ORTHO05D007781 1.1e-180 637.1 549 59.4
CANSAT35G1785 Cannabis sativa HOM05D005843 ORTHO05D007781 4.3e-180 635.2 522 62.3
Sc20g0004950 Simmondsia chinensis HOM05D005843 ORTHO05D007781 7.4e-180 634.4 511 60.7
Cpa.g.sc332.7 Carica papaya HOM05D005843 ORTHO05D007781 2.8e-179 632.5 511 63.0
Rhsim05G0192300 Rhododendron simsii HOM05D005843 ORTHO05D007781 2.8e-179 632.5 511 63.8
PSO151G0180 Papaver somniferum HOM05D005843 ORTHO05D007781 1.1e-178 630.6 512 61.7
Oeu024347.1 Olea europaea HOM05D005843 ORTHO05D007781 5.3e-178 628.2 511 61.1
EL10Ac3g07255 Beta vulgaris HOM05D005843 ORTHO05D007781 3.4e-177 625.5 517 60.7
ClCG04G008190 Citrullus lanatus HOM05D005843 ORTHO05D007781 4.5e-177 625.2 512 62.3
PGR004G0455 Punica granatum HOM05D005843 ORTHO05D007781 1.7e-176 623.2 512 62.7
ECA238G1173 Erigeron canadensis HOM05D005843 ORTHO05D007781 8.5e-176 620.9 513 60.4
DCAR_014847 Daucus carota HOM05D005843 ORTHO05D007781 4.2e-175 618.6 513 60.6
Nitab4.5_0001190g0070 Nicotiana tabacum HOM05D005843 ORTHO05D007781 4.7e-174 615.1 512 61.3
FAN02G2362 Fragaria x ananassa HOM05D005843 ORTHO05D007781 7.9e-174 614.4 542 58.1
Sopen09g005490 Solanum pennellii HOM05D005843 ORTHO05D007781 7.9e-174 614.4 513 60.4
Aqoxy6G01388 Aquilegia oxysepala HOM05D005843 ORTHO05D007781 1.4e-173 613.6 516 59.5
PGSC0003DMG400008911 Solanum tuberosum HOM05D005843 ORTHO05D007781 1.8e-173 613.2 513 61.0
CAN.G326.14 Capsicum annuum HOM05D005843 ORTHO05D007781 6.7e-173 611.3 511 60.1
Sed0019468 Sechium edule HOM05D005843 ORTHO05D007781 4.4e-172 608.6 483 62.7
Migut.J00332 Erythranthe guttata HOM05D005843 ORTHO05D007781 1.3e-171 607.1 510 59.6
BcaNung05922 Brassica carinata HOM05D005843 ORTHO05D007781 2.8e-171 605.9 510 59.8
SalBow3G1829 Salvia bowleyana HOM05D005843 ORTHO05D007781 8.2e-171 604.4 508 58.9
A03p00670 Brassica napus HOM05D005843 ORTHO05D007781 1.4e-170 603.6 511 59.9
Solyc09g010770.3 Solanum lycopersicum HOM05D005843 ORTHO05D007781 1.4e-170 603.6 508 59.1
A10p33250 Brassica napus HOM05D005843 ORTHO05D007781 3.1e-170 602.4 513 59.5
BolC9t60149H Brassica oleracea HOM05D005843 ORTHO05D007781 3.1e-170 602.4 514 59.5
Thhalv10013300m.g Eutrema salsugineum HOM05D005843 ORTHO05D007781 1.2e-169 600.5 515 59.4
BcaC06g31988 Brassica carinata HOM05D005843 ORTHO05D007781 2.6e-169 599.4 515 58.8
BcaNung02129 Brassica carinata HOM05D005843 ORTHO05D007781 5.9e-169 598.2 512 59.4
BraA03t09456Z Brassica rapa HOM05D005843 ORTHO05D007781 5.9e-169 598.2 520 58.3
FAN09G3893 Fragaria x ananassa HOM05D005843 ORTHO05D007781 7.7e-169 597.8 521 59.5
Peaxi162Scf00165g01322 Petunia axillaris HOM05D005843 ORTHO05D007781 8.5e-168 594.3 550 56.0
Lsat_1_v5_gn_2_17401 Lactuca sativa HOM05D005843 ORTHO05D007781 1.1e-167 594.0 504 58.7
Carub.0006s0120 Capsella rubella HOM05D005843 ORTHO05D007781 4.2e-167 592.0 514 57.4
AT5G02410 Arabidopsis thaliana HOM05D005843 ORTHO05D007781 9.4e-167 590.9 513 59.6
C03p00940 Brassica napus HOM05D005843 ORTHO05D007781 1.2e-166 590.5 508 58.9
BolC3t12656H Brassica oleracea HOM05D005843 ORTHO05D007781 1.2e-166 590.5 508 58.9
SGA_v2.0_scaffold75G24948 Striga asiatica HOM05D005843 ORTHO05D007781 2.1e-166 589.7 510 58.2
Sp6g40070 Schrenkiella parvula HOM05D005843 ORTHO05D007781 3.6e-166 589.0 513 58.9
BcaB01g06160 Brassica carinata HOM05D005843 ORTHO05D007781 1.0e-165 587.4 508 58.5
CARHR211000 Cardamine hirsuta HOM05D005843 ORTHO05D007781 6.7e-165 584.7 514 58.8
HanXRQChr16g0515781 Helianthus annuus HOM05D005843 ORTHO05D007781 7.4e-164 581.3 494 59.5
AL6G11640 Arabidopsis lyrata HOM05D005843 ORTHO05D007781 3.1e-162 575.9 498 58.8
Hma1.2p1_1513F.1_g288030 Hydrangea macrophylla HOM05D005843 ORTHO05D007781 2.6e-161 572.8 461 62.9
Dinv35609 Davidia involucrata HOM05D005843 ORTHO05D007781 7.7e-161 571.2 428 66.6
Aa31LG1G22390 Aethionema arabicum HOM05D005843 ORTHO05D007781 3.8e-160 568.9 580 51.9
THA.LOC104809903 Tarenaya hassleriana HOM05D005843 ORTHO05D007781 5.0e-160 568.5 508 57.5
CSS0035027 Camellia sinensis var. sinensis HOM05D005843 ORTHO05D007781 1.9e-159 566.6 446 64.3
Actinidia26464 Actinidia chinensis HOM05D005843 ORTHO05D000250 1.2e-158 563.9 437 64.5
AUR62030297 Chenopodium quinoa HOM05D005843 ORTHO05D007781 2.7e-158 562.8 595 52.8
C09p74160 Brassica napus HOM05D005843 ORTHO05D007781 1.1e-154 550.8 483 58.8
HPP92_000805 Vanilla planifolia HOM05D005843 ORTHO05D007781 1.8e-154 550.1 512 54.3
arahy.Tifrunner.gnm1.ann1.HAEF8J Arachis hypogaea HOM05D005843 ORTHO05D007781 5.5e-151 538.5 388 71.6
SHI00339 Sapria himalayana HOM05D005843 ORTHO05D007781 3.7e-147 525.8 534 51.5
Sabra06G0064400 Salix brachista HOM05D005843 ORTHO05D007781 3.1e-146 522.7 533 53.3
AUR62015928 Chenopodium quinoa HOM05D005843 ORTHO05D007781 6.6e-144 515.0 512 53.5
unitig_26.g9195 Utricularia gibba HOM05D005843 ORTHO05D007781 2.8e-134 483.0 458 55.9
Pp3c4_12410 Physcomitrium patens HOM05D005843 ORTHO05D007781 3.4e-132 476.1 522 48.3
Os04g0503700 Oryza sativa ssp. japonica HOM05D005843 ORTHO05D007781 3.1e-125 453.0 465 49.7
FvH4_6g13910 Fragaria vesca HOM05D005843 ORTHO05D007781 2.9e-123 446.4 379 60.4
SMO137G0039 Selaginella moellendorffii HOM05D005843 ORTHO05D007781 6.8e-117 425.2 524 44.7
Dinv37176 Davidia involucrata HOM05D005843 ORTHO05D007781 5.1e-112 409.1 340 61.8
Mapoly0047s0019 Marchantia polymorpha HOM05D005843 ORTHO05D007781 5.6e-103 379.0 527 40.6
AUR62018365 Chenopodium quinoa HOM05D005843 ORTHO05D007781 1.3e-102 377.9 378 56.1
Potri.006G084800 Populus trichocarpa HOM05D005843 ORTHO05D007781 3.6e-94 349.7 333 56.5
CDE09G0345 Ceratophyllum demersum HOM05D005843 ORTHO05D007781 9.0e-93 345.1 450 44.9
ATR0585G056 Amborella trichopoda HOM05D005843 ORTHO05D007781 1.3e-91 341.3 381 48.0
vmacro20152 Vaccinium macrocarpon HOM05D005843 ORTHO05D007781 6.0e-89 332.4 431 45.9
Zm00001eb078080 Zea mays HOM05D005843 ORTHO05D007781 1.6e-81 307.8 338 47.6
Nitab4.5_0002018g0090 Nicotiana tabacum HOM05D005843 ORTHO05D007781 1.9e-79 300.8 244 63.9
BcaC06g31987 Brassica carinata HOM05D005843 ORTHO05D007781 4.5e-76 289.7 321 50.5
A03p00710 Brassica napus HOM05D005843 ORTHO05D007781 2.1e-73 280.8 196 69.4
AagrBONN_evm.TU.Sc2ySwM_117.1914 Anthoceros agrestis HOM05D005843 ORTHO05D007781 2.7e-73 280.4 454 40.3
SGA_v2.0_scaffold75G24944 Striga asiatica HOM05D005843 ORTHO05D007781 9.0e-69 265.4 427 39.6
BcaNung05921 Brassica carinata HOM05D002515 ORTHO05D002722 2.7e-65 253.8 368 43.2
TAR636G2087 Trochodendron aralioides HOM05D005843 ORTHO05D007781 3.8e-59 233.4 179 63.1
VMungo1309G2290 Vigna mungo HOM05D005843 ORTHO05D007781 3.8e-59 233.4 135 82.2
CBR_g29861 Chara braunii HOM05D005843 ORTHO05D000002 4.7e-57 226.5 356 39.0
Cre01.g041300 Chlamydomonas reinhardtii HOM05D005843 ORTHO05D007781 4.4e-55 219.9 542 31.0
TAR636G1000 Trochodendron aralioides HOM05D005843 ORTHO05D007781 1.3e-43 181.8 126 70.6
TAR636G1324 Trochodendron aralioides HOM05D005843 ORTHO05D007781 1.3e-43 181.8 126 70.6
VMungo1309G1664 Vigna mungo HOM05D005843 ORTHO05D007781 5.5e-42 176.4 216 48.6
DCAR_015734 Daucus carota HOM05D005843 ORTHO05D007781 7.5e-39 166.0 136 58.1
AUR62040681 Chenopodium quinoa HOM05D005843 ORTHO05D007781 3.2e-34 150.6 199 42.7
Haze_26583 Corylus avellana HOM05D005843 ORTHO05D007781 3.0e-32 144.1 502 28.3
SEGI_06123 Sequoiadendron giganteum HOM05D005843 ORTHO05D007781 2.6e-23 114.4 114 54.4
DCAR_015735 Daucus carota HOM05D005843 ORTHO05D007781 1.7e-22 111.7 60 81.7
Hma1.2p1_1611F.1_g293520 Hydrangea macrophylla HOM05D005843 ORTHO05D007781 8.6e-19 99.4 52 80.8
TAR636G3605 Trochodendron aralioides HOM05D005843 ORTHO05D007781 5.6e-18 96.7 115 46.1
SEGI_08652 Sequoiadendron giganteum HOM05D005843 ORTHO05D000001 6.2e-17 93.2 61 63.9
C03p92170 Brassica napus HOM05D005843 ORTHO05D040940 4.0e-16 90.5 65 63.1
BolC3t21533H Brassica oleracea HOM05D005843 ORTHO05D040940 4.0e-16 90.5 65 63.1
BraA10t45356Z Brassica rapa HOM05D005843 ORTHO05D007781 2.2e-14 84.7 65 58.5
TAR636G0893 Trochodendron aralioides HOM05D005843 ORTHO05D007781 9.2e-13 79.3 64 56.2
SEGI_16582 Sequoiadendron giganteum HOM05D005843 ORTHO05D014789 3.9e-11 73.9 120 35.8


User provided reference genes

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