Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_26016_v3 Cicer arietinum L. HOM05D007490 ORTHO05D008750 6.4e-189 664.1 369 100.0
Psat6g119920 Pisum sativum HOM05D007490 ORTHO05D008750 3.4e-57 226.5 231 60.2
Medtr0100s0190 Medicago truncatula HOM05D007490 ORTHO05D008750 1.3e-56 224.6 233 61.8
TPR.G10631 Trifolium pratense HOM05D007490 ORTHO05D008750 7.1e-55 218.8 233 62.7
Glyma.02G183950 Glycine max HOM05D007490 ORTHO05D008750 4.6e-46 189.5 237 61.6
VMungo0720G0884 Vigna mungo HOM05D007490 ORTHO05D008750 1.3e-45 188.0 233 55.4
Phvul.007G252900 Phaseolus vulgaris HOM05D007490 ORTHO05D008750 3.9e-45 186.4 236 53.8
arahy.Tifrunner.gnm1.ann1.M65R33 Arachis hypogaea HOM05D007490 ORTHO05D008750 2.8e-43 180.3 248 51.6
Lj5g0014197 Lotus japonicus HOM05D007490 ORTHO05D008750 6.2e-43 179.1 231 54.5
arahy.Tifrunner.gnm1.ann1.QGQ977 Arachis hypogaea HOM05D007490 ORTHO05D008750 7.8e-38 162.2 292 43.8
CiPaw.09G038000 Carya illinoinensis HOM05D007490 ORTHO05D008750 9.0e-26 122.1 232 40.5
Lalb_Chr21g0316471 Lupinus albus HOM05D007490 ORTHO05D008750 4.6e-22 109.8 126 56.3
Manes.09G021650 Manihot esculenta HOM05D007490 ORTHO05D008750 6.0e-22 109.4 230 43.0
Haze_19861 Corylus avellana HOM05D007490 ORTHO05D008750 3.3e-20 103.6 236 37.3
TPR.G36127 Trifolium pratense HOM05D007490 ORTHO05D008750 3.3e-20 103.6 103 65.0
QL07p000297 Quercus lobata HOM05D007490 ORTHO05D008750 7.4e-20 102.4 159 43.4
CsaV3_4G011720 Cucumis sativus L. HOM05D007490 ORTHO05D008750 9.0e-18 95.5 231 35.5
COL.COLO4_28277 Corchorus olitorius HOM05D007490 ORTHO05D008750 2.6e-17 94.0 230 35.2
Ciclev10005740m.g Citrus clementina HOM05D007490 ORTHO05D008750 7.6e-17 92.4 232 35.8
TAR636G1914 Trochodendron aralioides HOM05D007490 ORTHO05D008750 1.3e-16 91.7 144 43.8
Dinv39599 Davidia involucrata HOM05D007490 ORTHO05D008750 2.2e-16 90.9 232 37.1
Gohir.D11G329000 Gossypium hirsutum HOM05D007490 ORTHO05D008750 3.8e-16 90.1 151 39.1
Gorai.007G360400 Gossypium raimondii HOM05D007490 ORTHO05D008750 3.8e-16 90.1 151 39.1
Gohir.A11G312500 Gossypium hirsutum HOM05D007490 ORTHO05D008750 3.2e-15 87.0 151 39.1
Cpa.g.sc92.48 Carica papaya HOM05D007490 ORTHO05D008750 4.2e-15 86.7 230 34.8
Thecc.05G153900 Theobroma cacao HOM05D007490 ORTHO05D008750 5.5e-15 86.3 231 33.3
Rhsim03G0021300 Rhododendron simsii HOM05D007490 ORTHO05D008750 2.7e-14 84.0 167 40.1
Sed0009481 Sechium edule HOM05D007490 ORTHO05D008750 3.5e-14 83.6 132 45.5
ClCG00G005730 Citrullus lanatus HOM05D007490 ORTHO05D008750 4.6e-14 83.2 135 43.0
MD12G1073500 Malus domestica HOM05D007490 ORTHO05D008750 7.9e-14 82.4 234 33.8
PGR004G2251 Punica granatum HOM05D007490 ORTHO05D008750 7.9e-14 82.4 154 35.1
Hma1.2p1_2266F.1_g318420 Hydrangea macrophylla HOM05D007490 ORTHO05D008750 1.8e-13 81.3 154 39.6
CANSAT80G2830 Cannabis sativa HOM05D007490 ORTHO05D008750 2.3e-13 80.9 236 31.8
Oeu033005.1 Olea europaea HOM05D007490 ORTHO05D008750 6.7e-13 79.3 151 39.7
Atru.chr1.1094 Acer truncatum HOM05D007490 ORTHO05D008750 8.7e-13 79.0 231 32.9
A09p50330 Brassica napus HOM05D007490 ORTHO05D008750 8.7e-13 79.0 230 33.5
BraA09t40485Z Brassica rapa HOM05D014273 ORTHO05D008750 8.7e-13 79.0 230 33.5
Sp5g05160 Schrenkiella parvula HOM05D007490 ORTHO05D008750 8.7e-13 79.0 233 32.6
CARHR167640 Cardamine hirsuta HOM05D007490 ORTHO05D008750 1.1e-12 78.6 230 33.0
Actinidia09331 Actinidia chinensis HOM05D007490 ORTHO05D008750 1.9e-12 77.8 233 35.2
Duzib128G0116 Durio zibethinus HOM05D007490 ORTHO05D008750 2.5e-12 77.4 233 33.5
AT3G57440 Arabidopsis thaliana HOM05D007490 ORTHO05D008750 3.3e-12 77.0 237 35.4
Lsat_1_v5_gn_8_81320 Lactuca sativa HOM05D007490 ORTHO05D008750 5.7e-12 76.3 138 40.6
DCAR_013600 Daucus carota HOM05D007490 ORTHO05D008750 9.7e-12 75.5 232 34.1
Nn7g36272 Nelumbo nucifera HOM05D007490 ORTHO05D008750 1.6e-11 74.7 163 36.8
Potri.006G050900 Populus trichocarpa HOM05D007490 ORTHO05D008750 2.2e-11 74.3 157 36.3
AL5G39010 Arabidopsis lyrata HOM05D007490 ORTHO05D008750 2.8e-11 73.9 230 32.6
Thhalv10006439m.g Eutrema salsugineum HOM05D007490 ORTHO05D008750 3.7e-11 73.6 235 33.2
FvH4_6g23771 Fragaria vesca HOM05D007490 ORTHO05D008750 4.8e-11 73.2 161 32.9
Solyc10g080140.2 Solanum lycopersicum HOM05D015445 ORTHO05D008750 6.3e-11 72.8 151 38.4
PGSC0003DMG400023724 Solanum tuberosum HOM05D015445 ORTHO05D008750 1.1e-10 72.0 153 38.6
Sopen10g030750 Solanum pennellii HOM05D015445 ORTHO05D008750 1.4e-10 71.6 150 38.0
Thhalv10017790m.g Eutrema salsugineum HOM05D007490 ORTHO05D008750 3.1e-10 70.5 135 37.8
FAN02G3575 Fragaria x ananassa HOM05D007490 ORTHO05D008750 3.1e-10 70.5 162 34.0
Prupe.7G061400 Prunus persica HOM05D007490 ORTHO05D008750 3.1e-10 70.5 230 30.4
Sc13g0001780 Simmondsia chinensis HOM05D007490 ORTHO05D008750 3.1e-10 70.5 101 45.5
Carub.0005s2428 Capsella rubella HOM05D007490 ORTHO05D008750 6.9e-10 69.3 138 38.4
BcaC07g40379 Brassica carinata HOM05D007490 ORTHO05D008750 9.0e-10 68.9 141 39.0
Eucgr.A02350 Eucalyptus grandis HOM05D007490 ORTHO05D008750 9.0e-10 68.9 135 37.8
Actinidia39227 Actinidia chinensis HOM05D007490 ORTHO05D008750 1.5e-09 68.2 160 35.6
THA.LOC104804865 Tarenaya hassleriana HOM05D007490 ORTHO05D008750 1.5e-09 68.2 229 32.3
Rhsim03G0022200 Rhododendron simsii HOM05D007490 ORTHO05D008750 2.6e-09 67.4 186 34.4
Cc06_g17080 Coffea canephora HOM05D007490 ORTHO05D008750 1.3e-08 65.1 161 32.3
Ah.04g151770 Amaranthus hybridus HOM05D007490 ORTHO05D008750 2.9e-08 63.9 165 35.8
TWI74G0148 Tripterygium wilfordii HOM05D007490 ORTHO05D008750 2.9e-08 63.9 102 48.0
ECA236G0950 Erigeron canadensis HOM05D007490 ORTHO05D008750 2.5e-07 60.8 139 36.7
FAN09G1636 Fragaria x ananassa HOM05D007490 ORTHO05D008750 4.2e-07 60.1 105 43.8
Sopen04g007810 Solanum pennellii HOM05D007490 ORTHO05D008750 4.2e-07 60.1 139 38.1
PGSC0003DMG400027275 Solanum tuberosum HOM05D007490 ORTHO05D008750 4.2e-07 60.1 135 37.8
SHI15744 Sapria himalayana HOM05D007490 ORTHO05D008750 9.4e-07 58.9 241 28.6
FAN14G3182 Fragaria x ananassa HOM05D007490 ORTHO05D008750 1.6e-06 58.2 105 39.0
C03p27950 Brassica napus HOM05D007490 ORTHO05D008750 2.1e-06 57.8 135 33.3
BcaNung06245 Brassica carinata HOM05D007490 ORTHO05D008750 2.7e-06 57.4 135 33.3
BolC3t15167H Brassica oleracea HOM05D007490 ORTHO05D008750 2.7e-06 57.4 135 33.3
AUR62026035 Chenopodium quinoa HOM05D007490 ORTHO05D008750 2.7e-06 57.4 149 33.6
A03p23430 Brassica napus HOM05D007490 ORTHO05D008750 3.6e-06 57.0 135 33.3
Duzib205G1398 Durio zibethinus HOM05D007490 ORTHO05D008750 3.6e-06 57.0 147 31.3
Migut.K00089 Erythranthe guttata HOM05D007490 ORTHO05D008750 3.6e-06 57.0 230 29.1
RcHm_v2.0_Chr3g0482221 Rosa chinensis HOM05D007490 ORTHO05D008750 4.6e-06 56.6 154 30.5
SalBow3G0554 Salvia bowleyana HOM05D007490 ORTHO05D008750 7.9e-06 55.8 243 28.0


User provided reference genes

Program Settings