Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_25988_v3 Cicer arietinum L. HOM05D004716 ORTHO05D005646 1.5e-228 795.8 397 100.0
arahy.Tifrunner.gnm1.ann1.LT68UB Arachis hypogaea HOM05D004716 ORTHO05D005646 9.2e-202 706.8 397 86.9
arahy.Tifrunner.gnm1.ann1.RZZD7S Arachis hypogaea HOM05D004716 ORTHO05D005646 9.2e-202 706.8 397 86.9
TPR.G36694 Trifolium pratense HOM05D004716 ORTHO05D005646 7.3e-199 697.2 410 85.6
Lalb_Chr01g0009631 Lupinus albus HOM05D004716 ORTHO05D005646 1.8e-197 692.6 397 85.6
Cfa018329 Carpinus fangiana HOM05D004716 ORTHO05D005646 4.3e-191 671.4 397 80.9
Glyma.10G225500 Glycine max HOM05D004716 ORTHO05D005646 7.3e-191 670.6 397 83.6
Ca_19935_v3 Cicer arietinum L. HOM05D004716 ORTHO05D005646 1.2e-190 669.8 397 82.6
Haze_17746 Corylus avellana HOM05D004716 ORTHO05D005646 1.2e-190 669.8 397 80.9
Phvul.007G079400 Phaseolus vulgaris HOM05D004716 ORTHO05D005646 2.8e-190 668.7 397 83.1
Glyma.20G166300 Glycine max HOM05D004716 ORTHO05D005646 6.2e-190 667.5 397 83.1
Prupe.8G028200 Prunus persica HOM05D004716 ORTHO05D005646 4.9e-187 657.9 397 80.1
QL02p024060 Quercus lobata HOM05D004716 ORTHO05D005646 8.4e-187 657.1 396 79.3
CiPaw.15G016900 Carya illinoinensis HOM05D004716 ORTHO05D005646 1.4e-186 656.4 397 79.1
Lalb_Chr06g0161551 Lupinus albus HOM05D004716 ORTHO05D005646 2.4e-186 655.6 397 80.6
MD05G1023700 Malus domestica HOM05D004716 ORTHO05D005646 2.4e-186 655.6 397 79.8
Manes.18G091200 Manihot esculenta HOM05D004716 ORTHO05D005646 4.2e-186 654.8 397 80.6
ClCG09G009620 Citrullus lanatus HOM05D004716 ORTHO05D005646 9.2e-186 653.7 397 80.1
RcHm_v2.0_Chr6g0275661 Rosa chinensis HOM05D004716 ORTHO05D005646 2.1e-185 652.5 397 80.9
Thecc.08G149900 Theobroma cacao HOM05D004716 ORTHO05D005646 2.1e-185 652.5 397 79.3
COL.COLO4_37837 Corchorus olitorius HOM05D004716 ORTHO05D005646 2.7e-185 652.1 397 79.8
Potri.002G069100 Populus trichocarpa HOM05D004716 ORTHO05D005646 1.0e-184 650.2 397 79.3
MD10G1024300 Malus domestica HOM05D004716 ORTHO05D005646 4.3e-183 644.8 397 78.3
CANSAT25G0539 Cannabis sativa HOM05D004716 ORTHO05D005646 5.6e-183 644.4 397 78.8
Cpa.g.sc21.190 Carica papaya HOM05D004716 ORTHO05D005646 9.6e-183 643.7 424 75.2
Duzib093G0980 Durio zibethinus HOM05D004716 ORTHO05D005646 1.6e-182 642.9 398 78.6
CsaV3_7G025180 Cucumis sativus L. HOM05D004716 ORTHO05D005646 2.1e-182 642.5 397 79.1
Potri.005G191300 Populus trichocarpa HOM05D004716 ORTHO05D005646 2.8e-182 642.1 397 78.8
MELO3C023718.2 Cucumis melo HOM05D004716 ORTHO05D005646 4.7e-182 641.3 397 78.8
Atru.chr13.2155 Acer truncatum HOM05D004716 ORTHO05D005646 1.1e-181 640.2 397 78.6
Hma1.2p1_0105F.1_g050810 Hydrangea macrophylla HOM05D004716 ORTHO05D005646 1.8e-181 639.4 399 78.4
Duzib116G0661 Durio zibethinus HOM05D004716 ORTHO05D005646 6.9e-181 637.5 397 77.8
Duzib041G0148 Durio zibethinus HOM05D004716 ORTHO05D005646 9.0e-181 637.1 397 78.3
Gohir.A05G242900 Gossypium hirsutum HOM05D004716 ORTHO05D005646 9.0e-181 637.1 398 77.4
Sabra05G0146100 Salix brachista HOM05D004716 ORTHO05D005646 1.2e-180 636.7 397 78.1
Gorai.009G253500 Gossypium raimondii HOM05D004716 ORTHO05D005646 1.5e-180 636.3 398 77.4
Lj5g0004042 Lotus japonicus HOM05D004716 ORTHO05D005646 4.4e-180 634.8 397 79.6
CiPaw.16G013500 Carya illinoinensis HOM05D004716 ORTHO05D005646 1.7e-179 632.9 397 76.8
FvH4_2g13910 Fragaria vesca HOM05D004716 ORTHO05D005646 1.7e-179 632.9 397 78.1
Dinv41092 Davidia involucrata HOM05D004716 ORTHO05D005646 2.2e-179 632.5 399 77.9
FAN27G2333 Fragaria x ananassa HOM05D004716 ORTHO05D005646 6.4e-179 630.9 397 77.8
Sed0016522 Sechium edule HOM05D004716 ORTHO05D005646 1.1e-178 630.2 397 77.1
TWI34G0952 Tripterygium wilfordii HOM05D004716 ORTHO05D005646 1.9e-178 629.4 397 78.1
Dinv25852 Davidia involucrata HOM05D004716 ORTHO05D005646 2.4e-178 629.0 399 76.7
FAN15G2444 Fragaria x ananassa HOM05D004716 ORTHO05D005646 2.4e-178 629.0 397 77.6
FAN24G2048 Fragaria x ananassa HOM05D004716 ORTHO05D005646 4.2e-178 628.2 397 77.8
GSVIVG01034512001 Vitis vinifera HOM05D004716 ORTHO05D005646 4.2e-178 628.2 399 77.7
Eucgr.F04241 Eucalyptus grandis HOM05D004716 ORTHO05D005646 7.1e-178 627.5 397 78.3
Sed0004003 Sechium edule HOM05D004716 ORTHO05D005646 9.3e-178 627.1 397 77.6
Sed0005850 Sechium edule HOM05D004716 ORTHO05D005646 9.3e-178 627.1 397 77.6
FAN20G2258 Fragaria x ananassa HOM05D004716 ORTHO05D005646 1.6e-177 626.3 397 77.3
CSS0049856 Camellia sinensis var. sinensis HOM05D004716 ORTHO05D005646 2.1e-177 625.9 397 77.1
TWI60G0041 Tripterygium wilfordii HOM05D004716 ORTHO05D005646 2.7e-177 625.5 397 77.3
Sabra02G0054300 Salix brachista HOM05D004716 ORTHO05D005646 3.5e-177 625.2 409 74.8
TAR381G1500 Trochodendron aralioides HOM05D004716 ORTHO05D005646 2.3e-176 622.5 400 75.5
Actinidia17798 Actinidia chinensis HOM05D004716 ORTHO05D005646 6.6e-176 620.9 399 75.9
Rhsim06G0090400 Rhododendron simsii HOM05D004716 ORTHO05D005646 5.6e-175 617.8 397 76.8
Peaxi162Scf00765g00315 Petunia axillaris HOM05D004716 ORTHO05D005646 4.8e-174 614.8 399 76.4
Nitab4.5_0008759g0020 Nicotiana tabacum HOM05D004716 ORTHO05D005646 1.8e-173 612.8 397 76.3
Cc10_g14730 Coffea canephora HOM05D004716 ORTHO05D005646 2.4e-173 612.5 399 74.9
Gohir.A05G270100 Gossypium hirsutum HOM05D004716 ORTHO05D005646 2.4e-173 612.5 398 76.9
MBI09_g32373_MAGBIO Magnolia biondii HOM05D004716 ORTHO05D005646 2.4e-173 612.5 398 75.4
Nitab4.5_0000032g0020 Nicotiana tabacum HOM05D004716 ORTHO05D005646 1.2e-172 610.1 397 76.3
Gorai.009G285100 Gossypium raimondii HOM05D004716 ORTHO05D005646 3.4e-172 608.6 398 76.4
Nn1g06102 Nelumbo nucifera HOM05D004716 ORTHO05D005646 5.8e-172 607.8 400 75.2
Ciclev10000573m.g Citrus clementina HOM05D004716 ORTHO05D005646 2.2e-171 605.9 398 75.4
TPR.G30003 Trifolium pratense HOM05D004716 ORTHO05D005646 1.4e-170 603.2 397 76.6
PGR044G2101 Punica granatum HOM05D004716 ORTHO05D005646 2.4e-170 602.4 398 73.9
CAN.G268.7 Capsicum annuum HOM05D004716 ORTHO05D005646 3.2e-170 602.1 399 75.2
Aqoxy5G02106 Aquilegia oxysepala HOM05D004716 ORTHO05D005646 1.6e-169 599.7 397 75.3
TAR625G0458 Trochodendron aralioides HOM05D004716 ORTHO05D005646 1.6e-169 599.7 400 73.0
DCAR_001131 Daucus carota HOM05D004716 ORTHO05D005646 2.1e-169 599.4 397 73.0
Oeu046025.1 Olea europaea HOM05D004716 ORTHO05D005646 4.6e-169 598.2 397 73.3
Migut.N03224 Erythranthe guttata HOM05D004716 ORTHO05D005646 1.8e-168 596.3 397 73.0
Medtr1g098940 Medicago truncatula HOM05D004716 ORTHO05D005646 2.3e-168 595.9 397 75.8
Sopen04g027280 Solanum pennellii HOM05D004716 ORTHO05D005646 3.0e-168 595.5 399 74.2
Solyc04g071320.4 Solanum lycopersicum HOM05D004716 ORTHO05D005646 4.3e-167 591.7 399 73.9
MSTRG.22371 Avicennia marina HOM05D004716 ORTHO05D005646 5.6e-167 591.3 399 72.7
Nn5g28715 Nelumbo nucifera HOM05D004716 ORTHO05D005646 3.7e-166 588.6 400 73.5
THA.LOC104809692 Tarenaya hassleriana HOM05D004716 ORTHO05D005646 1.1e-165 587.0 399 73.2
PSO238G0051 Papaver somniferum HOM05D004716 ORTHO05D005646 3.1e-165 585.5 399 71.9
Aa31LG6G9740 Aethionema arabicum HOM05D004716 ORTHO05D005646 6.9e-165 584.3 398 72.4
PSO210G2251 Papaver somniferum HOM05D004716 ORTHO05D005646 1.5e-164 583.2 399 71.9
Oeu014493.1 Olea europaea HOM05D004716 ORTHO05D005646 2.6e-164 582.4 364 76.9
AUR62013572 Chenopodium quinoa HOM05D004716 ORTHO05D005646 3.4e-164 582.0 398 71.9
AUR62026717 Chenopodium quinoa HOM05D004716 ORTHO05D005646 3.8e-163 578.6 398 71.6
Ah.05g167860 Amaranthus hybridus HOM05D004716 ORTHO05D005646 2.5e-162 575.9 397 70.8
HanXRQChr10g0279061 Helianthus annuus HOM05D004716 ORTHO05D005646 2.5e-162 575.9 403 69.2
Gohir.D05G272200 Gossypium hirsutum HOM05D004716 ORTHO05D005646 1.2e-161 573.5 398 72.6
Lj4C695G10 Lonicera japonica HOM05D004716 ORTHO05D005646 1.6e-161 573.2 364 76.4
Carub.0001s3471 Capsella rubella HOM05D004716 ORTHO05D005646 6.0e-161 571.2 400 71.2
EL10Ac1g01533 Beta vulgaris HOM05D004716 ORTHO05D005646 3.0e-160 568.9 398 70.9
AL1G51810 Arabidopsis lyrata HOM05D004716 ORTHO05D005646 3.3e-159 565.5 400 70.0
Lj7A371T50 Lonicera japonica HOM05D004716 ORTHO05D005646 3.3e-159 565.5 397 71.8
ECA246G4589 Erigeron canadensis HOM05D004716 ORTHO05D005646 5.6e-159 564.7 400 70.2
BcaC08g42816 Brassica carinata HOM05D004716 ORTHO05D005646 7.4e-159 564.3 400 70.0
C06p00280 Brassica napus HOM05D004716 ORTHO05D005646 7.4e-159 564.3 400 70.0
Thhalv10011324m.g Eutrema salsugineum HOM05D004716 ORTHO05D005646 1.3e-158 563.5 400 69.5
A10p07790 Brassica napus HOM05D004716 ORTHO05D005646 1.6e-158 563.1 400 70.2
Sp1g32700 Schrenkiella parvula HOM05D004716 ORTHO05D005646 2.1e-158 562.8 400 69.2
SGA_v2.0_scaffold25G11175 Striga asiatica HOM05D004716 ORTHO05D005646 2.8e-158 562.4 397 69.8
AT1G43690 Arabidopsis thaliana HOM05D004716 ORTHO05D005646 3.7e-158 562.0 400 70.0
ATR0772G093 Amborella trichopoda HOM05D004716 ORTHO05D005646 4.8e-158 561.6 399 68.9
BraSC36t46025Z Brassica rapa HOM05D004716 ORTHO05D005646 4.8e-158 561.6 400 70.0
Psat6g193200 Pisum sativum HOM05D004716 ORTHO05D005646 1.4e-157 560.1 315 84.8
Gohir.D05G244400 Gossypium hirsutum HOM05D004716 ORTHO05D005646 1.8e-157 559.7 398 70.6
Lsat_1_v5_gn_6_99641 Lactuca sativa HOM05D004716 ORTHO05D005646 1.2e-156 557.0 397 69.0
Sc02g0004170 Simmondsia chinensis HOM05D004716 ORTHO05D005646 2.2e-155 552.7 398 68.3
BcaB07g33979 Brassica carinata HOM05D004716 ORTHO05D005646 6.5e-155 551.2 400 69.2
SalBow7G0781 Salvia bowleyana HOM05D004716 ORTHO05D005646 2.7e-153 545.8 397 67.8
CARHR035580 Cardamine hirsuta HOM05D004716 ORTHO05D005646 1.8e-152 543.1 402 65.9
SHI09390 Sapria himalayana HOM05D004716 ORTHO05D005646 1.8e-152 543.1 402 66.7
Psat6g193040 Pisum sativum HOM05D004716 ORTHO05D005646 2.2e-150 536.2 300 84.0
unitig_62.g23528 Utricularia gibba HOM05D004716 ORTHO05D005646 1.1e-149 533.9 400 67.5
Zm00001eb422340 Zea mays HOM05D004716 ORTHO05D005646 1.1e-146 523.9 398 66.1
Migut.C01013 Erythranthe guttata HOM05D004716 ORTHO05D005646 7.9e-145 517.7 401 65.8
SalBow6G6163 Salvia bowleyana HOM05D004716 ORTHO05D005646 6.3e-142 508.1 400 65.5
vmacro21155 Vaccinium macrocarpon HOM05D004716 ORTHO05D005646 1.1e-141 507.3 313 77.6
CDE08G0143 Ceratophyllum demersum HOM05D004716 ORTHO05D005646 2.4e-141 506.1 398 64.1
Oeu011938.1 Olea europaea HOM05D004716 ORTHO05D005646 3.2e-138 495.7 297 79.5
SMO331G0079 Selaginella moellendorffii HOM05D004716 ORTHO05D005646 4.7e-129 465.3 399 59.6
Zm00001eb422260 Zea mays HOM05D004716 ORTHO05D005646 1.8e-128 463.4 313 72.2
CDE06G2375 Ceratophyllum demersum HOM05D004716 ORTHO05D005646 9.7e-127 457.6 291 75.3
Mapoly0014s0164 Marchantia polymorpha HOM05D004716 ORTHO05D005646 1.2e-124 450.7 400 55.8
Os04g0421800 Oryza sativa ssp. japonica HOM05D004716 ORTHO05D005646 1.2e-124 450.7 298 73.5
Pp3c6_18530 Physcomitrium patens HOM05D004716 ORTHO05D005646 5.2e-120 435.3 398 54.5
HPP92_019355 Vanilla planifolia HOM05D004716 ORTHO05D005646 1.5e-119 433.7 319 66.8
SGA_v2.0_scaffold24G10374 Striga asiatica HOM05D004716 ORTHO05D005646 1.4e-117 427.2 410 55.9
AagrBONN_evm.TU.Sc2ySwM_344.4417 Anthoceros agrestis HOM05D004716 ORTHO05D005646 9.1e-117 424.5 415 52.8
Pp3c5_6660 Physcomitrium patens HOM05D004716 ORTHO05D005646 3.5e-116 422.5 398 54.0
HanXRQChr10g0277841 Helianthus annuus HOM05D004716 ORTHO05D005646 2.9e-107 392.9 302 68.2
Zm00001eb422280 Zea mays HOM05D004716 ORTHO05D005646 1.8e-101 373.6 257 69.6
Zm00001eb422320 Zea mays HOM05D004716 ORTHO05D005646 1.8e-101 373.6 257 69.6
CBR_g11170 Chara braunii HOM05D004716 ORTHO05D005646 2.7e-100 369.8 439 47.8
Actinidia10653 Actinidia chinensis HOM05D004716 ORTHO05D005646 1.6e-65 254.2 219 62.6
PRCOL_00002924 Prasinoderma coloniale HOM05D004716 ORTHO05D005646 6.2e-57 225.7 426 34.0
CAN.G309.90 Capsicum annuum HOM05D004716 ORTHO05D005646 1.3e-33 148.3 178 49.4
Actinidia13988 Actinidia chinensis HOM05D004716 ORTHO05D005646 6.1e-28 129.4 87 67.8
Cre06.g286600 Chlamydomonas reinhardtii HOM05D004716 ORTHO05D005646 5.9e-23 112.8 148 42.6
TAR636G3535 Trochodendron aralioides HOM05D004716 ORTHO05D005646 2.5e-21 107.5 92 64.1
PRCOL_00004133 Prasinoderma coloniale HOM05D004716 ORTHO05D005646 1.8e-19 101.3 129 46.5


User provided reference genes

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