Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_25920_v3 Cicer arietinum L. HOM05D007591 ORTHO05D009564 5.3e-52 207.6 119 100.0
Medtr6g036570 Medicago truncatula HOM05D007591 ORTHO05D009564 2.5e-33 145.6 121 77.7
Psat0s3092g0040 Pisum sativum HOM05D007591 ORTHO05D009564 2.1e-32 142.5 120 74.2
arahy.Tifrunner.gnm1.ann1.T0CPW9 Arachis hypogaea HOM05D007591 ORTHO05D009564 9.6e-30 133.7 117 70.9
Peaxi162Scf00171g00034 Petunia axillaris HOM05D007591 ORTHO05D009564 9.6e-30 133.7 127 66.1
CAN.G1909.5 Capsicum annuum HOM05D007591 ORTHO05D009564 3.7e-29 131.7 122 63.9
Nitab4.5_0004612g0010 Nicotiana tabacum HOM05D007591 ORTHO05D009564 6.2e-29 131.0 123 65.9
Nitab4.5_0001180g0270 Nicotiana tabacum HOM05D007591 ORTHO05D009564 8.2e-29 130.6 123 63.4
PGSC0003DMG400010159 Solanum tuberosum HOM05D007591 ORTHO05D009564 1.1e-28 130.2 122 64.8
Haze_18422 Corylus avellana HOM05D007591 ORTHO05D009564 3.1e-28 128.6 132 63.6
Solyc03g098410.1 Solanum lycopersicum HOM05D007591 ORTHO05D009564 3.1e-28 128.6 122 63.9
Sopen03g029150 Solanum pennellii HOM05D007591 ORTHO05D009564 3.1e-28 128.6 122 63.9
Glyma.08G057500 Glycine max HOM05D007591 ORTHO05D009564 9.0e-28 127.1 131 67.9
QL07p035218 Quercus lobata HOM05D007591 ORTHO05D009564 1.2e-27 126.7 126 64.3
PGR083G0752 Punica granatum HOM05D007591 ORTHO05D009564 2.6e-27 125.6 122 62.3
Oeu001600.1 Olea europaea HOM05D007591 ORTHO05D009564 3.4e-27 125.2 119 59.7
Prupe.5G241900 Prunus persica HOM05D007591 ORTHO05D009564 3.4e-27 125.2 128 66.4
EL10Ac8g19512 Beta vulgaris HOM05D007591 ORTHO05D009564 5.8e-27 124.4 122 68.9
SalBow5G5001 Salvia bowleyana HOM05D007591 ORTHO05D009564 7.6e-27 124.0 120 64.2
Potri.004G068400 Populus trichocarpa HOM05D007591 ORTHO05D009564 1.0e-26 123.6 120 60.0
Sed0023620 Sechium edule HOM05D007591 ORTHO05D009564 1.0e-26 123.6 125 62.4
CiPaw.16G070000 Carya illinoinensis HOM05D007591 ORTHO05D009564 2.2e-26 122.5 128 64.8
MSTRG.23207 Avicennia marina HOM05D007591 ORTHO05D009564 5.0e-26 121.3 121 59.5
TWI15G0768 Tripterygium wilfordii HOM05D007591 ORTHO05D009564 5.0e-26 121.3 119 67.2
Lalb_Chr05g0221361 Lupinus albus HOM05D007591 ORTHO05D009564 6.5e-26 120.9 125 66.4
Sabra04G0046100 Salix brachista HOM05D007591 ORTHO05D009564 6.5e-26 120.9 117 59.8
Migut.O00251 Erythranthe guttata HOM05D007591 ORTHO05D009564 8.4e-26 120.6 119 63.9
Phvul.002G333300 Phaseolus vulgaris HOM05D007591 ORTHO05D009564 8.4e-26 120.6 131 61.8
CsaV3_1G005150 Cucumis sativus L. HOM05D007591 ORTHO05D009564 1.1e-25 120.2 122 62.3
Nn3g18513 Nelumbo nucifera HOM05D007591 ORTHO05D009564 1.1e-25 120.2 119 64.7
TAR622G1019 Trochodendron aralioides HOM05D007591 ORTHO05D009564 1.1e-25 120.2 121 64.5
DCAR_014000 Daucus carota HOM05D007591 ORTHO05D009564 1.4e-25 119.8 123 59.3
RcHm_v2.0_Chr7g0177391 Rosa chinensis HOM05D007591 ORTHO05D009564 1.4e-25 119.8 135 60.7
MELO3C001953.2 Cucumis melo HOM05D007591 ORTHO05D009564 1.9e-25 119.4 122 64.8
Cpa.g.sc36.38 Carica papaya HOM05D007591 ORTHO05D009564 2.5e-25 119.0 119 64.7
Aa31LG6G9200 Aethionema arabicum HOM05D007591 ORTHO05D009564 3.2e-25 118.6 122 55.7
FAN04G1638 Fragaria x ananassa HOM05D007591 ORTHO05D009564 4.2e-25 118.2 122 63.1
Actinidia35144 Actinidia chinensis HOM05D007591 ORTHO05D009564 5.5e-25 117.9 127 55.1
Cc04_g08740 Coffea canephora HOM05D007591 ORTHO05D009564 5.5e-25 117.9 124 61.3
FvH4_5g18200 Fragaria vesca HOM05D007591 ORTHO05D009564 5.5e-25 117.9 131 63.4
Aqoxy3G04178 Aquilegia oxysepala HOM05D007591 ORTHO05D009564 7.2e-25 117.5 122 62.3
arahy.Tifrunner.gnm1.ann1.B1XHC0 Arachis hypogaea HOM05D007591 ORTHO05D009564 7.2e-25 117.5 119 68.1
Manes.02G219300 Manihot esculenta HOM05D007591 ORTHO05D009564 7.2e-25 117.5 119 63.9
AL4G17330 Arabidopsis lyrata HOM05D007591 ORTHO05D009564 9.3e-25 117.1 126 56.3
SpUn0008_0030 Schrenkiella parvula HOM05D007591 ORTHO05D009564 9.3e-25 117.1 128 55.5
CARHR134910 Cardamine hirsuta HOM05D007591 ORTHO05D009564 1.6e-24 116.3 119 59.7
THA.LOC104817210 Tarenaya hassleriana HOM05D007591 ORTHO05D009564 1.6e-24 116.3 130 62.3
ClCG04G012550 Citrullus lanatus HOM05D007591 ORTHO05D009564 2.1e-24 115.9 120 63.3
Dinv01404 Davidia involucrata HOM05D007591 ORTHO05D009564 2.1e-24 115.9 124 53.2
Duzib091G0002 Durio zibethinus HOM05D007591 ORTHO05D009564 2.7e-24 115.5 123 56.1
Thhalv10011878m.g Eutrema salsugineum HOM05D007591 ORTHO05D009564 3.5e-24 115.2 119 59.7
HanXRQChr17g0560331 Helianthus annuus HOM05D007591 ORTHO05D009564 4.6e-24 114.8 128 57.8
FAN18G3921 Fragaria x ananassa HOM05D007591 ORTHO05D009564 6.1e-24 114.4 133 60.2
Gohir.A02G020402 Gossypium hirsutum HOM05D007591 ORTHO05D009564 7.9e-24 114.0 120 56.7
Sc10g0009060 Simmondsia chinensis HOM05D007591 ORTHO05D009564 1.0e-23 113.6 116 58.6
Gohir.D02G024000 Gossypium hirsutum HOM05D007591 ORTHO05D009564 1.3e-23 113.2 121 55.4
Gorai.005G030000 Gossypium raimondii HOM05D007591 ORTHO05D009564 1.3e-23 113.2 121 55.4
MD14G1244400 Malus domestica HOM05D007591 ORTHO05D009564 1.3e-23 113.2 126 63.5
Thecc.04G198100 Theobroma cacao HOM05D007591 ORTHO05D009564 1.8e-23 112.8 120 64.2
AT2G25720 Arabidopsis thaliana HOM05D007591 ORTHO05D009564 2.3e-23 112.5 119 62.2
Lsat_1_v5_gn_4_52441 Lactuca sativa HOM05D007591 ORTHO05D009564 2.3e-23 112.5 130 61.5
PSO063G6315 Papaver somniferum HOM05D007591 ORTHO05D009564 2.3e-23 112.5 130 58.5
FAN13G0294 Fragaria x ananassa HOM05D007591 ORTHO05D009564 3.0e-23 112.1 124 61.3
SHI12607 Sapria himalayana HOM05D007591 ORTHO05D009564 3.0e-23 112.1 120 51.7
A04p11310 Brassica napus HOM05D007591 ORTHO05D009564 3.9e-23 111.7 123 59.3
BraA04t16792Z Brassica rapa HOM05D007591 ORTHO05D009564 3.9e-23 111.7 123 59.3
Carub.0001s3401 Capsella rubella HOM05D007591 ORTHO05D009564 3.9e-23 111.7 116 54.3
Atru.chr9.1591 Acer truncatum HOM05D007591 ORTHO05D009564 5.1e-23 111.3 127 58.3
BcaB06g27212 Brassica carinata HOM05D007591 ORTHO05D009564 6.7e-23 110.9 120 60.8
Eucgr.H00568 Eucalyptus grandis HOM05D007591 ORTHO05D009564 6.7e-23 110.9 136 50.7
MBI06_g28831_MAGBIO Magnolia biondii HOM05D007591 ORTHO05D009564 6.7e-23 110.9 123 56.9
LjContig00484g0016765 Lotus japonicus HOM05D007591 ORTHO05D009564 8.7e-23 110.5 128 63.3
Rhsim12G0136500 Rhododendron simsii HOM05D007591 ORTHO05D009564 8.7e-23 110.5 126 60.3
HPP92_005097 Vanilla planifolia HOM05D007591 ORTHO05D009564 8.7e-23 110.5 123 54.5
ATR0807G077 Amborella trichopoda HOM05D007591 ORTHO05D009564 1.1e-22 110.2 126 58.7
CSS0020209 Camellia sinensis var. sinensis HOM05D007591 ORTHO05D009564 1.1e-22 110.2 136 55.9
Hma1.2p1_1404F.1_g281340 Hydrangea macrophylla HOM05D007591 ORTHO05D009564 1.1e-22 110.2 127 58.3
C04p45070 Brassica napus HOM05D007591 ORTHO05D009564 2.5e-22 109.0 119 59.7
BolC4t26085H Brassica oleracea HOM05D007591 ORTHO05D009564 2.5e-22 109.0 119 59.7
ECA234G2981 Erigeron canadensis HOM05D007591 ORTHO05D009564 2.2e-21 105.9 126 59.5
Ah.09g232230 Amaranthus hybridus HOM05D007591 ORTHO05D009564 6.3e-21 104.4 125 56.8
COL.COLO4_20200 Corchorus olitorius HOM05D007591 ORTHO05D009564 6.3e-21 104.4 121 62.8
Ciclev10022902m.g Citrus clementina HOM05D007591 ORTHO05D009564 8.2e-21 104.0 122 61.5
unitig_22.g5435 Utricularia gibba HOM05D007591 ORTHO05D009564 8.5e-18 94.0 110 56.4
CDE07G1474 Ceratophyllum demersum HOM05D007591 ORTHO05D009564 7.9e-16 87.4 102 47.1
AUR62008565 Chenopodium quinoa HOM05D007591 ORTHO05D009564 2.3e-15 85.9 66 65.2
AUR62033202 Chenopodium quinoa HOM05D007591 ORTHO05D009564 2.3e-15 85.9 66 65.2
SpUn0123_0020 Schrenkiella parvula HOM05D007591 ORTHO05D009564 2.3e-15 85.9 53 75.5
Zm00001eb429080 Zea mays HOM05D007591 ORTHO05D009564 2.3e-15 85.9 125 41.6
SEGI_35599 Sequoiadendron giganteum HOM05D007591 ORTHO05D009564 2.5e-14 82.4 119 42.0
Medtr6g036573 Medicago truncatula HOM05D007591 ORTHO05D009564 1.7e-13 79.7 42 90.5
Pp3c23_22030 Physcomitrium patens HOM05D007591 ORTHO05D009564 9.1e-12 73.9 121 47.1
CAN.G1909.8 Capsicum annuum HOM05D007591 ORTHO05D009564 1.5e-11 73.2 59 66.1
Mapoly0020s0124 Marchantia polymorpha HOM05D007591 ORTHO05D009564 8.5e-10 67.4 135 36.3
THA.LOC104813140 Tarenaya hassleriana HOM05D007591 ORTHO05D009564 8.5e-10 67.4 52 59.6
Atru.chr5.956 Acer truncatum HOM05D007591 ORTHO05D009564 1.4e-09 66.6 66 57.6
Os04g0566000 Oryza sativa ssp. japonica HOM05D007591 ORTHO05D009564 9.4e-09 63.9 48 66.7
CBR_g12703 Chara braunii HOM05D007591 ORTHO05D009564 2.7e-08 62.4 122 42.6


User provided reference genes

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