Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_25918_v3 Cicer arietinum L. HOM05D007327 ORTHO05D009342 2.5e-115 418.7 197 100.0
Psat1g101680 Pisum sativum HOM05D007327 ORTHO05D009342 4.9e-103 377.9 197 87.8
Medtr6g036750 Medicago truncatula HOM05D007327 ORTHO05D009342 4.1e-102 374.8 197 86.8
TPR.G31184 Trifolium pratense HOM05D007327 ORTHO05D009342 1.2e-98 363.2 197 85.3
Glyma.02G081500 Glycine max HOM05D007327 ORTHO05D009342 2.7e-93 345.5 197 80.2
arahy.Tifrunner.gnm1.ann1.LUB646 Arachis hypogaea HOM05D007327 ORTHO05D009342 8.6e-92 340.5 208 74.5
arahy.Tifrunner.gnm1.ann1.S2I56E Arachis hypogaea HOM05D007327 ORTHO05D009342 3.3e-91 338.6 208 74.0
Cfa018321 Carpinus fangiana HOM05D007327 ORTHO05D009342 7.3e-91 337.4 197 77.2
Manes.18G092400 Manihot esculenta HOM05D007327 ORTHO05D009342 1.8e-89 332.8 197 75.1
Lj2g0012645 Lotus japonicus HOM05D007327 ORTHO05D009342 6.8e-89 330.9 197 77.2
GSVIVG01034535001 Vitis vinifera HOM05D007327 ORTHO05D009342 2.0e-88 329.3 197 75.6
CiPaw.15G016000 Carya illinoinensis HOM05D007327 ORTHO05D009342 3.4e-88 328.6 197 73.1
Oeu051268.1 Olea europaea HOM05D007327 ORTHO05D009342 4.4e-88 328.2 197 74.1
Prupe.8G031100 Prunus persica HOM05D007327 ORTHO05D009342 9.8e-88 327.0 197 76.1
Hma1.2p1_0105F.1_g050650 Hydrangea macrophylla HOM05D007327 ORTHO05D009342 6.4e-87 324.3 197 75.1
Actinidia17791 Actinidia chinensis HOM05D007327 ORTHO05D009342 1.9e-86 322.8 197 74.1
Phvul.004G094900 Phaseolus vulgaris HOM05D007327 ORTHO05D009342 1.9e-86 322.8 197 76.6
Dinv25868 Davidia involucrata HOM05D007327 ORTHO05D009342 3.2e-86 322.0 206 71.4
Lalb_Chr19g0130241 Lupinus albus HOM05D007327 ORTHO05D009342 3.2e-86 322.0 208 73.1
Sed0007638 Sechium edule HOM05D007327 ORTHO05D009342 4.1e-86 321.6 197 71.1
RcHm_v2.0_Chr6g0275381 Rosa chinensis HOM05D007327 ORTHO05D009342 7.0e-86 320.9 197 74.1
Atru.chr13.2102 Acer truncatum HOM05D007327 ORTHO05D009342 1.2e-85 320.1 197 71.6
FvH4_2g13700 Fragaria vesca HOM05D007327 ORTHO05D009342 1.6e-85 319.7 197 74.6
Solyc04g071470.3 Solanum lycopersicum HOM05D007327 ORTHO05D009342 7.8e-85 317.4 197 72.1
TWI60G1090 Tripterygium wilfordii HOM05D007327 ORTHO05D009342 1.3e-84 316.6 197 71.1
Peaxi162Scf00599g00511 Petunia axillaris HOM05D007327 ORTHO05D009342 1.7e-84 316.2 196 73.0
Sopen04g027430 Solanum pennellii HOM05D007327 ORTHO05D009342 5.1e-84 314.7 197 71.6
Eucgr.F04237 Eucalyptus grandis HOM05D007327 ORTHO05D009342 8.6e-84 313.9 199 72.4
TAR628G0726 Trochodendron aralioides HOM05D007327 ORTHO05D009342 8.6e-84 313.9 197 72.1
MELO3C029831.2 Cucumis melo HOM05D007327 ORTHO05D009342 4.3e-83 311.6 197 71.1
COL.COLO4_08563 Corchorus olitorius HOM05D007327 ORTHO05D009342 9.5e-83 310.5 179 77.1
Haze_17755 Corylus avellana HOM05D007327 ORTHO05D009342 9.5e-83 310.5 274 56.2
CsaV3_6G005130 Cucumis sativus L. HOM05D007327 ORTHO05D009342 1.2e-82 310.1 197 70.6
Thecc.08G153100 Theobroma cacao HOM05D007327 ORTHO05D009342 2.1e-82 309.3 179 76.5
Gohir.D01G089200 Gossypium hirsutum HOM05D007327 ORTHO05D009342 3.6e-82 308.5 179 74.9
Gohir.A01G103900 Gossypium hirsutum HOM05D007327 ORTHO05D009342 1.1e-81 307.0 179 74.3
Gorai.002G114900 Gossypium raimondii HOM05D007327 ORTHO05D009342 1.1e-81 307.0 179 74.3
MD05G1026600 Malus domestica HOM05D007327 ORTHO05D009342 2.3e-81 305.8 197 71.1
ClCG08G007070 Citrullus lanatus HOM05D007327 ORTHO05D009342 3.1e-81 305.4 205 67.8
Duzib093G0512 Durio zibethinus HOM05D007327 ORTHO05D009342 3.1e-81 305.4 179 77.1
PSO541G6301 Papaver somniferum HOM05D007327 ORTHO05D009342 3.1e-81 305.4 197 67.5
HanXRQChr04g0108941 Helianthus annuus HOM05D007327 ORTHO05D009342 6.8e-81 304.3 197 66.5
Ciclev10001558m.g Citrus clementina HOM05D007327 ORTHO05D009342 1.5e-80 303.1 199 71.4
CANSAT25G1895 Cannabis sativa HOM05D007327 ORTHO05D009342 7.5e-80 300.8 197 68.5
ECA247G1449 Erigeron canadensis HOM05D007327 ORTHO05D009342 7.5e-80 300.8 197 66.0
Lsat_1_v5_gn_1_6021 Lactuca sativa HOM05D007327 ORTHO05D009342 7.5e-80 300.8 197 67.0
CSS0015629 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 4.9e-79 298.1 197 68.5
QL02p039069 Quercus lobata HOM05D007327 ORTHO05D009342 8.3e-79 297.4 189 69.8
Nn5g28751 Nelumbo nucifera HOM05D007327 ORTHO05D009342 3.2e-78 295.4 197 67.0
Aqoxy6G00379 Aquilegia oxysepala HOM05D007327 ORTHO05D009342 4.1e-78 295.0 196 68.4
SGA_v2.0_scaffold24G10336 Striga asiatica HOM05D007327 ORTHO05D009342 5.4e-78 294.7 197 68.5
Potri.002G067900 Populus trichocarpa HOM05D007327 ORTHO05D009342 1.2e-77 293.5 208 63.0
FAN15G0044 Fragaria x ananassa HOM05D007327 ORTHO05D009342 7.8e-77 290.8 261 56.7
FAN24G0347 Fragaria x ananassa HOM05D007327 ORTHO05D009342 7.8e-77 290.8 261 56.3
Zm00001eb146700 Zea mays HOM05D007327 ORTHO05D009342 2.1e-74 282.7 198 65.7
Nitab4.5_0002452g0030 Nicotiana tabacum HOM05D007327 ORTHO05D009342 4.0e-73 278.5 209 63.6
ATR0582G033 Amborella trichopoda HOM05D007327 ORTHO05D009342 6.8e-73 277.7 198 61.1
Os01g0867200 Oryza sativa ssp. japonica HOM05D007327 ORTHO05D009342 8.9e-73 277.3 198 63.6
Glyma.16G166900 Glycine max HOM05D007327 ORTHO05D009342 3.8e-71 271.9 144 84.7
HPP92_000065 Vanilla planifolia HOM05D007327 ORTHO05D009342 1.1e-70 270.4 198 60.1
Cc10_g14850 Coffea canephora HOM05D007327 ORTHO05D009342 1.4e-70 270.0 177 67.2
PSO675G1203 Papaver somniferum HOM05D007327 ORTHO05D009342 2.5e-67 259.2 199 60.3
PGR044G2476 Punica granatum HOM05D007327 ORTHO05D009342 1.4e-65 253.4 189 63.0
PGR100G0004 Punica granatum HOM05D007327 ORTHO05D009342 1.4e-65 253.4 189 63.0
PGR080G0004 Punica granatum HOM05D007327 ORTHO05D009342 5.3e-65 251.5 189 62.4
unitig_26.g9897 Utricularia gibba HOM05D007327 ORTHO05D009342 4.4e-64 248.4 186 62.9
Hund26695 Selenicereus undatus HOM05D007327 ORTHO05D009342 7.1e-62 241.1 197 59.9
Sabra02G0053500 Salix brachista HOM05D007327 ORTHO05D009342 2.6e-56 222.6 181 56.9
Pp3c20_20940 Physcomitrium patens HOM05D007327 ORTHO05D009342 3.5e-53 212.2 197 51.3
SMO335G0004 Selaginella moellendorffii HOM05D007327 ORTHO05D009342 1.3e-52 210.3 198 50.0
Cc00_g31580 Coffea canephora HOM05D007327 ORTHO05D009342 6.7e-52 208.0 140 65.0
SalBow7G2928 Salvia bowleyana HOM05D007327 ORTHO05D009342 8.4e-47 191.0 235 46.8
AagrBONN_evm.TU.Sc2ySwM_344.2825 Anthoceros agrestis HOM05D007327 ORTHO05D009342 1.4e-46 190.3 178 48.9
SHI09061 Sapria himalayana HOM05D007327 ORTHO05D009342 5.5e-46 188.3 137 64.2
VMungo0464G2010 Vigna mungo HOM05D007327 ORTHO05D009342 7.1e-46 188.0 108 82.4
DCAR_010093 Daucus carota HOM05D007327 ORTHO05D009342 4.8e-42 175.3 121 68.6
Migut.C00996 Erythranthe guttata HOM05D007327 ORTHO05D009342 2.2e-39 166.4 100 76.0
Cpa.g.c33136.2 Carica papaya HOM05D007327 ORTHO05D009342 4.2e-38 162.2 116 61.2
SEGI_20996 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 1.5e-27 127.1 108 53.7
PRCOL_00001255 Prasinoderma coloniale HOM05D007327 ORTHO05D009342 2.4e-25 119.8 213 35.7
MCO03G524 Micromonas commoda HOM05D007327 ORTHO05D009342 2.2e-23 113.2 257 30.7
SMO228G0199 Selaginella moellendorffii HOM05D007327 ORTHO05D009342 6.5e-23 111.7 115 47.0
CSS0009897 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 2.1e-21 106.7 68 73.5
CSS0013095 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 2.7e-21 106.3 68 72.1
CSS0040121 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 1.0e-20 104.4 68 70.6
CSS0048751 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 3.0e-20 102.8 68 70.6
SEGI_01400 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 6.7e-20 101.7 80 51.2
PSO541G3507 Papaver somniferum HOM05D000022 ORTHO05D000071 8.8e-20 101.3 67 62.7
CSS0014849 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 6.3e-18 95.1 144 38.9
Cre12.g548350 Chlamydomonas reinhardtii HOM05D007327 ORTHO05D009342 1.4e-17 94.0 213 29.1
MBI17_g33120_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 2.9e-15 86.3 82 47.6
Actinidia27255 Actinidia chinensis HOM05D007327 ORTHO05D009342 3.9e-12 75.9 53 69.8
arahy.Tifrunner.gnm1.ann1.KIIE1S Arachis hypogaea HOM05D000198 ORTHO05D003365 1.5e-11 73.9 62 53.2
Cpa.g.sc21.198 Carica papaya HOM05D007327 ORTHO05D009342 2.9e-07 59.7 39 69.2


User provided reference genes

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