Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_25898_v3 Cicer arietinum L. HOM05D003936 ORTHO05D004747 3.5e-158 561.6 294 100.0
Ca_29510_v3 Cicer arietinum L. HOM05D003936 ORTHO05D004747 1.0e-157 560.1 292 100.0
Psat7g258560 Pisum sativum HOM05D003936 ORTHO05D004747 3.6e-70 269.2 302 58.3
Medtr4g009100 Medicago truncatula HOM05D003936 ORTHO05D004747 4.8e-54 215.7 298 51.3
TPR.G29720 Trifolium pratense HOM05D003936 ORTHO05D004747 2.5e-47 193.4 273 51.6
Lalb_Chr25g0279171 Lupinus albus HOM05D003936 ORTHO05D004747 1.5e-31 141.0 313 40.3
Lj3g0027357 Lotus japonicus HOM05D003936 ORTHO05D004747 1.8e-29 134.0 300 40.7
COL.COLO4_11826 Corchorus olitorius HOM05D003936 ORTHO05D004747 1.3e-27 127.9 327 37.0
Dinv23312 Davidia involucrata HOM05D003936 ORTHO05D004747 2.2e-27 127.1 319 36.1
Duzib212G0318 Durio zibethinus HOM05D003936 ORTHO05D004747 6.5e-27 125.6 331 38.1
MELO3C017854.2 Cucumis melo HOM05D003936 ORTHO05D004747 1.9e-26 124.0 338 34.9
Cpa.g.sc10.123 Carica papaya HOM05D003936 ORTHO05D004747 3.2e-26 123.2 330 35.8
CsaV3_4G001790 Cucumis sativus L. HOM05D003936 ORTHO05D004747 3.2e-26 123.2 332 35.2
QL05p034110 Quercus lobata HOM05D003936 ORTHO05D004747 3.6e-25 119.8 349 36.4
Prupe.3G095300 Prunus persica HOM05D003936 ORTHO05D004747 4.6e-25 119.4 317 35.0
Sed0007390 Sechium edule HOM05D003936 ORTHO05D004747 5.1e-24 115.9 290 36.2
CSS0006918 Camellia sinensis var. sinensis HOM05D003936 ORTHO05D004747 1.1e-23 114.8 276 35.5
Thecc.06G036500 Theobroma cacao HOM05D003936 ORTHO05D004747 1.1e-23 114.8 331 34.7
VMungo0331G1494 Vigna mungo HOM05D003936 ORTHO05D004747 3.3e-23 113.2 300 35.0
ClCG07G012350 Citrullus lanatus HOM05D003936 ORTHO05D004747 5.7e-23 112.5 336 34.8
TAR636G3155 Trochodendron aralioides HOM05D003936 ORTHO05D004747 1.7e-22 110.9 339 32.4
MSTRG.11168 Avicennia marina HOM05D003936 ORTHO05D004747 2.2e-22 110.5 317 32.2
Sed0026159 Sechium edule HOM05D003936 ORTHO05D004747 2.8e-22 110.2 338 33.1
Cfa001907 Carpinus fangiana HOM05D003936 ORTHO05D004747 4.8e-22 109.4 330 36.7
Hma1.2p1_0135F.1_g061770 Hydrangea macrophylla HOM05D003936 ORTHO05D004747 1.1e-21 108.2 275 34.9
Nn2g12258 Nelumbo nucifera HOM05D003936 ORTHO05D004747 1.1e-21 108.2 337 32.0
Rhsim08G0208400 Rhododendron simsii HOM05D003936 ORTHO05D004747 1.1e-21 108.2 321 35.8
vmacro17364 Vaccinium macrocarpon HOM05D003936 ORTHO05D004747 1.1e-21 108.2 272 35.3
arahy.Tifrunner.gnm1.ann1.17KRJ7 Arachis hypogaea HOM05D003936 ORTHO05D004747 1.8e-21 107.5 314 36.0
arahy.Tifrunner.gnm1.ann1.6RSI2J Arachis hypogaea HOM05D003936 ORTHO05D004747 1.8e-21 107.5 314 36.0
Sabra03G0131100 Salix brachista HOM05D003936 ORTHO05D004747 9.1e-21 105.1 263 38.0
Actinidia18230 Actinidia chinensis HOM05D003936 ORTHO05D004747 1.5e-20 104.4 273 35.2
Potri.003G178800 Populus trichocarpa HOM05D003936 ORTHO05D004747 2.6e-20 103.6 287 34.8
Actinidia25443 Actinidia chinensis HOM05D003936 ORTHO05D004747 7.7e-20 102.1 329 32.8
Oeu029910.1 Olea europaea HOM05D003936 ORTHO05D004747 7.7e-20 102.1 285 33.3
QL08p064447 Quercus lobata HOM05D003936 ORTHO05D004747 7.7e-20 102.1 311 37.6
TWI12G0163 Tripterygium wilfordii HOM05D003936 ORTHO05D004747 7.7e-20 102.1 341 33.7
THA.LOC104812450 Tarenaya hassleriana HOM05D003936 ORTHO05D004747 1.7e-19 100.9 258 36.4
C06p53910 Brassica napus HOM05D003936 ORTHO05D004747 5.0e-19 99.4 265 33.2
CiPaw.01G252100 Carya illinoinensis HOM05D003936 ORTHO05D004747 5.0e-19 99.4 339 35.4
Eucgr.F03943 Eucalyptus grandis HOM05D003936 ORTHO05D004747 1.4e-18 97.8 316 31.6
Phvul.010G158900 Phaseolus vulgaris HOM05D003936 ORTHO05D004747 3.2e-18 96.7 302 34.8
CiPaw.02G160600 Carya illinoinensis HOM05D003936 ORTHO05D004747 1.6e-17 94.4 313 35.8
Manes.04G106400 Manihot esculenta HOM05D003936 ORTHO05D004747 1.6e-17 94.4 365 32.1
Dinv30485 Davidia involucrata HOM05D003936 ORTHO05D004747 2.7e-17 93.6 326 32.2
Sopen08g002790 Solanum pennellii HOM05D003936 ORTHO05D004747 2.7e-17 93.6 244 36.5
BolC6t40405H Brassica oleracea HOM05D003936 ORTHO05D004747 4.7e-17 92.8 261 33.3
FAN02G3242 Fragaria x ananassa HOM05D003936 ORTHO05D004747 1.0e-16 91.7 312 32.1
BcaB05g25240 Brassica carinata HOM05D003936 ORTHO05D004747 2.3e-16 90.5 256 34.0
CANSAT11G1020 Cannabis sativa HOM05D003936 ORTHO05D004747 3.0e-16 90.1 331 32.0
PGR102G1525 Punica granatum HOM05D003936 ORTHO05D004747 3.9e-16 89.7 190 37.4
Glyma.07G026400 Glycine max HOM05D003936 ORTHO05D004747 5.2e-16 89.4 301 31.2
CARHR016320 Cardamine hirsuta HOM05D003936 ORTHO05D004747 1.1e-15 88.2 240 32.9
Atru.chr10.2382 Acer truncatum HOM05D003936 ORTHO05D004747 1.5e-15 87.8 327 32.1
A07p45080 Brassica napus HOM05D003936 ORTHO05D004747 1.5e-15 87.8 264 33.3
Thhalv10007635m.g Eutrema salsugineum HOM05D003936 ORTHO05D004747 1.5e-15 87.8 321 31.2
vmacro19035 Vaccinium macrocarpon HOM05D003936 ORTHO05D004747 1.5e-15 87.8 146 43.2
BraA07t32011Z Brassica rapa HOM05D003936 ORTHO05D004747 2.0e-15 87.4 261 33.0
BolC2t09719H Brassica oleracea HOM05D003936 ORTHO05D004747 3.3e-15 86.7 265 31.7
AUR62011450 Chenopodium quinoa HOM05D003936 ORTHO05D004747 3.3e-15 86.7 303 31.7
Ciclev10025627m.g Citrus clementina HOM05D003936 ORTHO05D004747 4.4e-15 86.3 329 32.2
CARHR073900 Cardamine hirsuta HOM05D003936 ORTHO05D004747 5.7e-15 85.9 300 32.7
BcaC03g15942 Brassica carinata HOM05D003936 ORTHO05D004747 7.4e-15 85.5 265 30.9
MD17G1219800 Malus domestica HOM05D003936 ORTHO05D004747 7.4e-15 85.5 349 30.1
BolC8t52022H Brassica oleracea HOM05D003936 ORTHO05D004747 9.7e-15 85.1 283 30.0
CDE02G1505 Ceratophyllum demersum HOM05D003936 ORTHO05D004747 2.2e-14 84.0 288 30.2
FAN14G5707 Fragaria x ananassa HOM05D003936 ORTHO05D004747 2.2e-14 84.0 312 31.4
C02p37040 Brassica napus HOM05D003936 ORTHO05D004747 3.7e-14 83.2 265 30.9
FvH4_6g28960 Fragaria vesca HOM05D003936 ORTHO05D004747 4.8e-14 82.8 312 31.4
CDE09G0364 Ceratophyllum demersum HOM05D003936 ORTHO05D004747 1.4e-13 81.3 258 31.4
FAN05G1488 Fragaria x ananassa HOM05D003936 ORTHO05D004747 1.4e-13 81.3 312 31.1
Nitab4.5_0000114g0150 Nicotiana tabacum HOM05D003936 ORTHO05D004747 1.4e-13 81.3 316 31.6
Sc10g0006130 Simmondsia chinensis HOM05D003936 ORTHO05D004747 1.4e-13 81.3 299 30.8
C08p44760 Brassica napus HOM05D003936 ORTHO05D004747 1.8e-13 80.9 283 30.0
ATR0584G049 Amborella trichopoda HOM05D003936 ORTHO05D004747 2.4e-13 80.5 271 31.0
SHI11258 Sapria himalayana HOM05D003936 ORTHO05D004747 2.4e-13 80.5 261 32.6
RcHm_v2.0_Chr2g0133511 Rosa chinensis HOM05D003936 ORTHO05D004747 3.1e-13 80.1 315 34.3
EL10Ac9g21843 Beta vulgaris HOM05D003936 ORTHO05D004747 4.1e-13 79.7 340 30.0
A02p23300 Brassica napus HOM05D003936 ORTHO05D004747 4.1e-13 79.7 256 30.5
Thhalv10018593m.g Eutrema salsugineum HOM05D003936 ORTHO05D004747 7.0e-13 79.0 318 30.5
unitig_27.g24954 Utricularia gibba HOM05D003936 ORTHO05D004747 7.0e-13 79.0 274 31.8
Solyc08g006840.3 Solanum lycopersicum HOM05D003936 ORTHO05D004747 9.1e-13 78.6 117 48.7
BcaC07g41479 Brassica carinata HOM05D003936 ORTHO05D004747 1.6e-12 77.8 283 30.7
BraA02t07326Z Brassica rapa HOM05D003936 ORTHO05D004747 2.0e-12 77.4 252 30.6
Migut.I00724 Erythranthe guttata HOM05D003936 ORTHO05D004747 2.0e-12 77.4 242 31.4
FAN09G0504 Fragaria x ananassa HOM05D003936 ORTHO05D004747 2.0e-12 77.4 306 32.0
Nitab4.5_0012293g0020 Nicotiana tabacum HOM05D003936 ORTHO05D004747 2.6e-12 77.0 236 32.6
AL2G40830 Arabidopsis lyrata HOM05D003936 ORTHO05D004747 4.5e-12 76.3 279 33.3
Gohir.D06G190700 Gossypium hirsutum HOM05D003936 ORTHO05D004747 7.7e-12 75.5 321 30.8
Gorai.010G223800 Gossypium raimondii HOM05D003936 ORTHO05D004747 7.7e-12 75.5 321 31.2
Aa31LG4G900 Aethionema arabicum HOM05D003936 ORTHO05D004747 1.7e-11 74.3 331 29.9
C05p14060 Brassica napus HOM05D003936 ORTHO05D004747 2.2e-11 73.9 257 31.9
AT1G80620 Arabidopsis thaliana HOM05D003936 ORTHO05D004747 8.5e-11 72.0 297 29.6
BolC5t30137H Brassica oleracea HOM05D003936 ORTHO05D004747 8.5e-11 72.0 274 31.0
BraA06t24358Z Brassica rapa HOM05D003936 ORTHO05D004747 8.5e-11 72.0 258 30.2
AUR62016607 Chenopodium quinoa HOM05D003936 ORTHO05D004747 8.5e-11 72.0 301 30.9
A06p11880 Brassica napus HOM05D003936 ORTHO05D004747 1.5e-10 71.2 258 30.2
MD09G1223400 Malus domestica HOM05D003936 ORTHO05D004747 2.5e-10 70.5 76 48.7
Cc04_g04830 Coffea canephora HOM05D003936 ORTHO05D004747 3.2e-10 70.1 108 39.8
Lj9A496T67 Lonicera japonica HOM05D003936 ORTHO05D004747 5.5e-10 69.3 214 30.4
MBI14_g15650_MAGBIO Magnolia biondii HOM05D003936 ORTHO05D004747 5.5e-10 69.3 249 30.1
Aqoxy7G03521 Aquilegia oxysepala HOM05D003936 ORTHO05D004747 7.2e-10 68.9 306 27.5
A09p61160 Brassica napus HOM05D003936 ORTHO05D004747 7.2e-10 68.9 281 28.8
BraA09t41490Z Brassica rapa HOM05D003936 ORTHO05D004747 7.2e-10 68.9 281 28.8
Sp5g35150 Schrenkiella parvula HOM05D003936 ORTHO05D004747 7.2e-10 68.9 306 30.1
PSO478G0782 Papaver somniferum HOM05D003936 ORTHO05D004747 1.6e-09 67.8 213 28.6
Lj2A141T58 Lonicera japonica HOM05D003936 ORTHO05D004747 2.1e-09 67.4 285 29.5
AT1G15810 Arabidopsis thaliana HOM05D003936 ORTHO05D004747 4.7e-09 66.2 240 31.2
Carub.0002s2693 Capsella rubella HOM05D003936 ORTHO05D004747 6.1e-09 65.9 300 30.0
Sp1g14110 Schrenkiella parvula HOM05D003936 ORTHO05D004747 8.0e-09 65.5 334 28.1
AL1G27960 Arabidopsis lyrata HOM05D003936 ORTHO05D004747 3.0e-08 63.5 304 28.9
RcHm_v2.0_Chr4g0407691 Rosa chinensis HOM05D003936 ORTHO05D004747 4.0e-08 63.2 321 31.5
Gohir.A06G183700 Gossypium hirsutum HOM05D003936 ORTHO05D004747 5.2e-08 62.8 328 29.0
FAN05G0608 Fragaria x ananassa HOM05D003936 ORTHO05D004747 6.7e-08 62.4 274 30.3
PSO210G7358 Papaver somniferum HOM05D003936 ORTHO05D004747 8.8e-08 62.0 221 29.0
DCAR_016286 Daucus carota HOM05D003936 ORTHO05D004747 1.5e-07 61.2 204 31.4
ECA232G5052 Erigeron canadensis HOM05D003936 ORTHO05D004747 2.6e-07 60.5 257 30.7
PSO782G4560 Papaver somniferum HOM05D003936 ORTHO05D004747 4.4e-07 59.7 209 29.7
SGA_v2.0_scaffold5G02746 Striga asiatica HOM05D003936 ORTHO05D004747 7.5e-07 58.9 309 26.2
Zm00001eb320360 Zea mays HOM05D003936 ORTHO05D004747 7.5e-07 58.9 266 27.1
Peaxi162Scf00045g02127 Petunia axillaris HOM05D003936 ORTHO05D004747 4.8e-06 56.2 202 29.2


User provided reference genes

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