Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_25868_v3 Cicer arietinum L. HOM05D001463 ORTHO05D001282 1.1e-72 276.6 142 100.0
Ca_25867_v3 Cicer arietinum L. HOM05D001463 ORTHO05D001282 1.9e-16 89.7 161 46.0
Medtr4g019710 Medicago truncatula HOM05D001463 ORTHO05D001282 5.5e-16 88.2 160 38.1
Medtr4g019690 Medicago truncatula HOM05D001463 ORTHO05D001282 9.5e-16 87.4 159 42.8
Glyma.03G073400 Glycine max HOM05D001463 ORTHO05D001282 1.2e-15 87.0 160 41.9
Lj3g0027625 Lotus japonicus HOM05D001463 ORTHO05D001282 6.8e-14 81.3 156 38.5
Lalb_Chr19g0125021 Lupinus albus HOM05D001463 ORTHO05D001282 1.2e-13 80.5 159 39.6
Lalb_Chr01g0022791 Lupinus albus HOM05D001463 ORTHO05D001282 2.6e-13 79.3 144 38.9
Potri.006G092400 Populus trichocarpa HOM05D001463 ORTHO05D001282 2.6e-13 79.3 162 38.9
arahy.Tifrunner.gnm1.ann1.9SAY5Z Arachis hypogaea HOM05D001463 ORTHO05D001282 4.4e-13 78.6 159 40.9
Lalb_Chr07g0193261 Lupinus albus HOM05D001463 ORTHO05D001282 7.5e-13 77.8 162 40.7
Glyma.01G105600 Glycine max HOM05D001463 ORTHO05D001282 2.8e-12 75.9 160 40.0
TAR623G0111 Trochodendron aralioides HOM05D001463 ORTHO05D001282 3.7e-12 75.5 161 37.9
arahy.Tifrunner.gnm1.ann1.1EL8LN Arachis hypogaea HOM05D001463 ORTHO05D001282 1.8e-11 73.2 154 39.0
Phvul.008G114000 Phaseolus vulgaris HOM05D001463 ORTHO05D001282 3.1e-11 72.4 160 40.6
Duzib106G1514 Durio zibethinus HOM05D001463 ORTHO05D001282 7.0e-11 71.2 162 38.3
Psat7g240840 Pisum sativum HOM05D001463 ORTHO05D001282 2.0e-10 69.7 162 36.4
TPR.G32538 Trifolium pratense HOM05D001463 ORTHO05D001282 2.0e-10 69.7 208 33.2
VMungo1383G3326 Vigna mungo HOM05D001463 ORTHO05D001282 4.5e-10 68.6 154 40.3
Manes.08G082200 Manihot esculenta HOM05D001463 ORTHO05D001282 7.8e-10 67.8 158 39.9
CsaV3_4G025610 Cucumis sativus L. HOM05D001463 ORTHO05D001282 1.7e-09 66.6 165 37.0
Ciclev10013013m.g Citrus clementina HOM05D001463 ORTHO05D001282 5.0e-09 65.1 166 38.6
Psat0s558g0040 Pisum sativum HOM05D001463 ORTHO05D001282 5.0e-09 65.1 161 37.3
arahy.Tifrunner.gnm1.ann1.J6Z8IZ Arachis hypogaea HOM05D001463 ORTHO05D001282 6.6e-09 64.7 157 37.6
Duzib093G1451 Durio zibethinus HOM05D001463 ORTHO05D001282 6.6e-09 64.7 168 38.7
Glyma.18G189900 Glycine max HOM05D001463 ORTHO05D001282 6.6e-09 64.7 112 42.9
TPR.G32550 Trifolium pratense HOM05D001463 ORTHO05D001282 6.6e-09 64.7 112 45.5
Cfa017303 Carpinus fangiana HOM05D001463 ORTHO05D001282 1.1e-08 63.9 157 37.6
Sed0014683 Sechium edule HOM05D001463 ORTHO05D001282 1.1e-08 63.9 154 36.4
GSVIVG01034066001 Vitis vinifera HOM05D001463 ORTHO05D001282 1.5e-08 63.5 160 31.2
MELO3C003186.2 Cucumis melo HOM05D001463 ORTHO05D001282 1.9e-08 63.2 157 35.7
TPR.G34922 Trifolium pratense HOM05D001463 ORTHO05D001282 4.3e-08 62.0 161 36.6
Medtr7g065150 Medicago truncatula HOM05D001463 ORTHO05D001282 9.5e-08 60.8 162 36.4
VMungo0331G1830 Vigna mungo HOM05D001463 ORTHO05D001282 9.5e-08 60.8 121 41.3
MD12G1154800 Malus domestica HOM05D001463 ORTHO05D001282 1.2e-07 60.5 162 37.0
CANSAT35G0720 Cannabis sativa HOM05D001463 ORTHO05D001282 1.6e-07 60.1 155 37.4
Hma1.2p1_0671F.1_g200570 Hydrangea macrophylla HOM05D001463 ORTHO05D001282 1.6e-07 60.1 161 34.2
ClCG04G007570 Citrullus lanatus HOM05D001463 ORTHO05D001282 2.1e-07 59.7 163 33.7
Lj1g0006352 Lotus japonicus HOM05D001463 ORTHO05D001282 2.8e-07 59.3 163 36.8
arahy.Tifrunner.gnm1.ann1.DI08LN Arachis hypogaea HOM05D001463 ORTHO05D001282 3.6e-07 58.9 165 35.2
MD04G1139000 Malus domestica HOM05D001463 ORTHO05D001282 4.7e-07 58.5 162 37.0
CiPaw.09G201400 Carya illinoinensis HOM05D001463 ORTHO05D001282 6.1e-07 58.2 162 34.6
CSS0026065 Camellia sinensis var. sinensis HOM05D001463 ORTHO05D001282 1.0e-06 57.4 156 33.3
Sed0005026 Sechium edule HOM05D001463 ORTHO05D001282 1.0e-06 57.4 156 32.1
Thecc.05G028900 Theobroma cacao HOM05D001463 ORTHO05D001282 1.0e-06 57.4 171 35.1
Dinv37114 Davidia involucrata HOM05D001463 ORTHO05D001282 1.8e-06 56.6 161 33.5
Glyma.07G139300 Glycine max HOM05D001463 ORTHO05D001282 1.8e-06 56.6 112 42.0
Psat7g241240 Pisum sativum HOM05D001463 ORTHO05D001282 1.8e-06 56.6 137 40.1
Atru.chr8.2091 Acer truncatum HOM05D001463 ORTHO05D001282 3.0e-06 55.8 115 40.9
CSS0026922 Camellia sinensis var. sinensis HOM05D001463 ORTHO05D001282 4.0e-06 55.5 159 33.3
CiPaw.10G149400 Carya illinoinensis HOM05D001463 ORTHO05D001282 6.8e-06 54.7 143 32.9
DCAR_010425 Daucus carota HOM05D001463 ORTHO05D001282 6.8e-06 54.7 171 31.6
Manes.09G098500 Manihot esculenta HOM05D001463 ORTHO05D001282 6.8e-06 54.7 159 34.0


User provided reference genes

Program Settings