Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_25852_v3 Cicer arietinum L. HOM05D009639 ORTHO05D010690 0.0e+00 1178.3 592 100.0
TPR.G24389 Trifolium pratense HOM05D009639 ORTHO05D010690 2.6e-192 676.0 635 60.9
Psat4g150240 Pisum sativum HOM05D009639 ORTHO05D010690 2.7e-189 666.0 598 62.9
Medtr3g010860 Medicago truncatula HOM05D009639 ORTHO05D010690 5.8e-176 621.7 585 60.2
Lj3g0012055 Lotus japonicus HOM05D009639 ORTHO05D010690 7.6e-160 568.2 604 54.0
Glyma.06G313400 Glycine max HOM05D009639 ORTHO05D010690 1.1e-126 458.0 715 44.2
Glyma.04G124900 Glycine max HOM05D009639 ORTHO05D010690 9.4e-126 454.9 709 43.7
VMungo1080G0201 Vigna mungo HOM05D009639 ORTHO05D010690 2.8e-114 416.8 604 44.7
Phvul.005G012500 Phaseolus vulgaris HOM05D009639 ORTHO05D010690 2.4e-113 413.7 758 39.2
Psat5g223640 Pisum sativum HOM05D009639 ORTHO05D010690 4.2e-110 402.9 349 63.6
Lalb_Chr18g0048201 Lupinus albus HOM05D009639 ORTHO05D010690 4.1e-89 333.2 605 41.0
Psat5g223680 Pisum sativum HOM05D009639 ORTHO05D010690 1.9e-49 201.4 166 63.3
Haze_02948 Corylus avellana HOM05D009639 ORTHO05D010690 4.0e-44 183.7 652 27.8
Cfa010987 Carpinus fangiana HOM05D009639 ORTHO05D010690 2.6e-35 154.5 567 27.9
Medtr3g010890 Medicago truncatula HOM05D009639 ORTHO05D010690 1.3e-34 152.1 163 50.9
Atru.chr12.1203 Acer truncatum HOM05D009639 ORTHO05D006184 5.9e-27 126.7 705 25.8
CiPaw.13G018700 Carya illinoinensis HOM05D009639 ORTHO05D010690 4.1e-20 104.0 95 53.7
QL04p023061 Quercus lobata HOM05D009639 ORTHO05D010690 6.9e-20 103.2 99 59.6
Ciclev10002267m.g Citrus clementina HOM05D009639 ORTHO05D010690 1.2e-19 102.4 97 54.6
Potri.003G188600 Populus trichocarpa HOM05D009639 ORTHO05D010690 3.4e-19 100.9 160 43.8
TAR623G0143 Trochodendron aralioides HOM05D009639 ORTHO05D010690 1.1e-17 95.9 72 66.7
Nn7g37150 Nelumbo nucifera HOM05D009639 ORTHO05D010690 1.9e-17 95.1 72 62.5
Sabra03G0137900 Salix brachista HOM05D009639 ORTHO05D010690 1.9e-17 95.1 89 57.3
Aqoxy1G01630 Aquilegia oxysepala HOM05D028564 ORTHO05D010690 2.1e-16 91.7 72 63.9
ATR1096G036 Amborella trichopoda HOM05D009639 ORTHO05D010690 3.0e-15 87.8 70 58.6
Manes.11G010500 Manihot esculenta HOM05D009639 ORTHO05D010690 6.7e-15 86.7 73 64.4
Aqoxy5G04141 Aquilegia oxysepala HOM05D009639 ORTHO05D010690 2.8e-13 81.3 69 60.9
Atru.chr12.1201 Acer truncatum HOM05D009639 ORTHO05D010690 5.3e-12 77.0 61 59.0
CANSAT56G3803 Cannabis sativa HOM05D009639 ORTHO05D010690 3.5e-11 74.3 74 54.1
SEGI_28746 Sequoiadendron giganteum HOM05D003060 ORTHO05D001716 7.7e-11 73.2 235 29.8
SEGI_40933 Sequoiadendron giganteum HOM05D003060 ORTHO05D001716 8.5e-10 69.7 71 47.9
Thhalv10011299m.g Eutrema salsugineum HOM05D010442 ORTHO05D010690 5.2e-07 60.5 64 51.6
SHI18113 Sapria himalayana HOM05D003060 ORTHO05D001716 6.7e-07 60.1 71 42.3
Carub.0001s3767 Capsella rubella HOM05D010442 ORTHO05D010690 1.1e-06 59.3 64 48.4
CDE08G1209 Ceratophyllum demersum HOM05D003060 ORTHO05D001716 1.1e-06 59.3 71 43.7
Sp1g35500 Schrenkiella parvula HOM05D010442 ORTHO05D010690 1.1e-06 59.3 64 50.0
Aa31LG10G5240 Aethionema arabicum HOM05D010442 ORTHO05D010690 1.5e-06 58.9 64 50.0
CDE02G1047 Ceratophyllum demersum HOM05D003060 ORTHO05D001716 1.5e-06 58.9 109 36.7
SEGI_14874 Sequoiadendron giganteum HOM05D000855 ORTHO05D001716 1.5e-06 58.9 70 42.9
ClCG02G015530 Citrullus lanatus HOM05D003060 ORTHO05D001716 2.6e-06 58.2 71 43.7
MELO3C004230.2 Cucumis melo HOM05D003060 ORTHO05D001716 2.6e-06 58.2 71 43.7
CsaV3_2G006550 Cucumis sativus L. HOM05D003060 ORTHO05D001716 2.6e-06 58.2 71 43.7
A06p04380 Brassica napus HOM05D010442 ORTHO05D010690 3.3e-06 57.8 64 50.0
BraA06t23642Z Brassica rapa HOM05D010442 ORTHO05D010690 3.3e-06 57.8 64 50.0
AL1G55200 Arabidopsis lyrata HOM05D010442 ORTHO05D010690 5.7e-06 57.0 64 48.4
AT1G48560 Arabidopsis thaliana HOM05D010442 ORTHO05D010690 9.7e-06 56.2 64 48.4
Lj6A674G26 Lonicera japonica HOM05D003060 ORTHO05D001716 9.7e-06 56.2 115 34.8
Peaxi162Scf00037g00924 Petunia axillaris HOM05D003060 ORTHO05D001716 9.7e-06 56.2 124 36.3


User provided reference genes

Program Settings