Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_25841_v3 Cicer arietinum L. HOM05D004207 ORTHO05D005188 8.8e-162 573.5 286 100.0
Medtr8g106395 Medicago truncatula HOM05D004207 ORTHO05D005188 6.6e-117 424.5 240 86.7
Psat7g005160 Pisum sativum HOM05D004207 ORTHO05D005188 8.0e-115 417.5 241 84.6
TPR.G5525 Trifolium pratense HOM05D004207 ORTHO05D005188 3.6e-107 392.1 270 75.2
Glyma.02G162900 Glycine max HOM05D004207 ORTHO05D005188 8.9e-106 387.5 241 79.3
VMungo0720G0799 Vigna mungo HOM05D004207 ORTHO05D005188 3.5e-102 375.6 240 75.8
Phvul.007G243300 Phaseolus vulgaris HOM05D004207 ORTHO05D005188 1.3e-101 373.6 240 76.2
Glyma.09G026700 Glycine max HOM05D004207 ORTHO05D005188 2.6e-97 359.4 242 76.0
MELO3C019096.2 Cucumis melo HOM05D004207 ORTHO05D005188 9.2e-95 350.9 260 68.5
arahy.Tifrunner.gnm1.ann1.I2Z9WV Arachis hypogaea HOM05D004207 ORTHO05D005188 2.7e-94 349.4 230 74.3
arahy.Tifrunner.gnm1.ann1.U0ATL0 Arachis hypogaea HOM05D004207 ORTHO05D005188 2.3e-93 346.3 231 75.3
GSVIVG01025744001 Vitis vinifera HOM05D004207 ORTHO05D005188 3.9e-93 345.5 250 70.8
Lj2C402T2 Lonicera japonica HOM05D004207 ORTHO05D005188 8.6e-93 344.4 252 67.9
QL07p011416 Quercus lobata HOM05D004207 ORTHO05D005188 1.5e-92 343.6 256 66.8
CANSAT64G1578 Cannabis sativa HOM05D004207 ORTHO05D005188 1.9e-92 343.2 252 69.4
Dinv29109 Davidia involucrata HOM05D004207 ORTHO05D005188 1.9e-92 343.2 254 68.9
Dinv21465 Davidia involucrata HOM05D004207 ORTHO05D005188 4.3e-92 342.0 253 69.2
HanXRQChr14g0437711 Helianthus annuus HOM05D004207 ORTHO05D005188 4.3e-92 342.0 247 68.0
Lj6A558G55 Lonicera japonica HOM05D004207 ORTHO05D005188 4.3e-92 342.0 249 68.3
TAR072G0001 Trochodendron aralioides HOM05D004207 ORTHO05D005188 5.6e-92 341.7 247 68.4
CiPaw.10G041000 Carya illinoinensis HOM05D004207 ORTHO05D005188 7.3e-92 341.3 258 69.0
Aqoxy1G00399 Aquilegia oxysepala HOM05D004207 ORTHO05D005188 1.6e-91 340.1 250 68.4
Potri.006G040400 Populus trichocarpa HOM05D004207 ORTHO05D005188 3.6e-91 339.0 248 69.4
Sabra06G0027300 Salix brachista HOM05D004207 ORTHO05D005188 4.7e-91 338.6 248 68.1
Eucgr.K01646 Eucalyptus grandis HOM05D004207 ORTHO05D005188 6.2e-91 338.2 254 68.5
SalBow6G6231 Salvia bowleyana HOM05D004207 ORTHO05D005188 1.1e-90 337.4 234 70.5
Nn7g36827 Nelumbo nucifera HOM05D004207 ORTHO05D005188 1.4e-90 337.0 250 67.6
Actinidia37879 Actinidia chinensis HOM05D004207 ORTHO05D005188 1.8e-90 336.7 253 67.6
Lalb_Chr14g0365741 Lupinus albus HOM05D004207 ORTHO05D005188 2.4e-90 336.3 242 69.8
Rhsim03G0036600 Rhododendron simsii HOM05D004207 ORTHO05D005188 2.4e-90 336.3 254 66.5
CSS0037639 Camellia sinensis var. sinensis HOM05D004207 ORTHO05D005188 6.8e-90 334.7 248 67.7
DCAR_020580 Daucus carota HOM05D004207 ORTHO05D005188 1.2e-89 334.0 250 64.0
Prupe.2G101700 Prunus persica HOM05D004207 ORTHO05D005188 1.2e-89 334.0 251 66.9
Cpa.g.sc92.81 Carica papaya HOM05D004207 ORTHO05D005188 1.5e-89 333.6 251 67.7
Actinidia17959 Actinidia chinensis HOM05D004207 ORTHO05D005188 2.0e-89 333.2 253 68.0
Oeu057783.1 Olea europaea HOM05D004207 ORTHO05D005188 3.4e-89 332.4 252 66.7
Migut.J01642 Erythranthe guttata HOM05D004207 ORTHO05D005188 4.4e-89 332.0 236 68.6
CSS0037507 Camellia sinensis var. sinensis HOM05D004207 ORTHO05D005188 5.8e-89 331.6 248 67.3
MSTRG.19794 Avicennia marina HOM05D004207 ORTHO05D005188 9.9e-89 330.9 252 65.1
COL.COLO4_07075 Corchorus olitorius HOM05D004207 ORTHO05D005188 9.9e-89 330.9 249 65.5
arahy.Tifrunner.gnm1.ann1.1DJ9GZ Arachis hypogaea HOM05D004207 ORTHO05D005188 1.3e-88 330.5 230 71.3
arahy.Tifrunner.gnm1.ann1.6G7KL6 Arachis hypogaea HOM05D004207 ORTHO05D005188 1.3e-88 330.5 231 72.7
Lj5g0028239 Lotus japonicus HOM05D004207 ORTHO05D005188 1.3e-88 330.5 230 72.6
MD12G1095500 Malus domestica HOM05D004207 ORTHO05D005188 1.3e-88 330.5 253 64.8
TWI77G0534 Tripterygium wilfordii HOM05D004207 ORTHO05D005188 1.3e-88 330.5 251 68.5
Hma1.2p1_0007F.1_g005270 Hydrangea macrophylla HOM05D004207 ORTHO05D005188 1.7e-88 330.1 253 66.4
Nitab4.5_0004588g0010 Nicotiana tabacum HOM05D004207 ORTHO05D005188 1.7e-88 330.1 251 64.5
Duzib093G1083 Durio zibethinus HOM05D004207 ORTHO05D005188 2.2e-88 329.7 247 66.0
ClCG04G005620 Citrullus lanatus HOM05D004207 ORTHO05D005188 2.9e-88 329.3 186 80.6
Potri.016G035600 Populus trichocarpa HOM05D004207 ORTHO05D005188 2.9e-88 329.3 247 67.2
Lsat_1_v5_gn_2_54201 Lactuca sativa HOM05D004207 ORTHO05D005188 3.8e-88 328.9 250 64.0
Sabra16G0037900 Salix brachista HOM05D004207 ORTHO05D005188 8.4e-88 327.8 247 67.6
RcHm_v2.0_Chr1g0339511 Rosa chinensis HOM05D004207 ORTHO05D005188 1.1e-87 327.4 239 68.6
Cfa019993 Carpinus fangiana HOM05D004207 ORTHO05D000579 1.4e-87 327.0 186 82.8
Manes.08G060400 Manihot esculenta HOM05D004207 ORTHO05D005188 1.4e-87 327.0 236 69.1
CAN.G960.63 Capsicum annuum HOM05D004207 ORTHO05D005188 1.9e-87 326.6 247 64.0
Nitab4.5_0000812g0050 Nicotiana tabacum HOM05D004207 ORTHO05D005188 1.9e-87 326.6 253 64.0
Gohir.A02G105901 Gossypium hirsutum HOM05D004207 ORTHO05D005188 5.4e-87 325.1 247 65.2
PGR142G0266 Punica granatum HOM05D004207 ORTHO05D005188 1.6e-86 323.6 246 67.9
Prupe.1G554500 Prunus persica HOM05D004207 ORTHO05D005188 3.5e-86 322.4 253 64.8
Atru.chr1.1398 Acer truncatum HOM05D004207 ORTHO05D005188 4.6e-86 322.0 250 66.0
SGA_v2.0_scaffold69G23162 Striga asiatica HOM05D004207 ORTHO05D005188 6.0e-86 321.6 247 66.4
CsaV3_4G029510 Cucumis sativus L. HOM05D004207 ORTHO05D005188 1.0e-85 320.9 186 79.0
FvH4_2g10400 Fragaria vesca HOM05D004207 ORTHO05D005188 1.0e-85 320.9 239 67.4
FAN24G1611 Fragaria x ananassa HOM05D004207 ORTHO05D005188 1.0e-85 320.9 239 67.4
Thecc.05G127200 Theobroma cacao HOM05D004207 ORTHO05D005188 1.3e-85 320.5 207 72.5
CSS0026158 Camellia sinensis var. sinensis HOM05D004207 ORTHO05D005188 2.3e-85 319.7 251 62.9
CSS0030520 Camellia sinensis var. sinensis HOM05D004207 ORTHO05D005188 2.3e-85 319.7 251 62.9
Cc06_g19790 Coffea canephora HOM05D004207 ORTHO05D005188 2.3e-85 319.7 252 65.1
FAN15G2977 Fragaria x ananassa HOM05D004207 ORTHO05D005188 2.3e-85 319.7 239 65.7
Gohir.D03G072800 Gossypium hirsutum HOM05D004207 ORTHO05D005188 2.3e-85 319.7 247 64.4
Gorai.003G087000 Gossypium raimondii HOM05D004207 ORTHO05D005188 2.3e-85 319.7 247 64.4
Oeu021494.1 Olea europaea HOM05D004207 ORTHO05D005188 3.9e-85 318.9 255 63.5
TAR633G0823 Trochodendron aralioides HOM05D004207 ORTHO05D005188 3.9e-85 318.9 189 79.4
Sed0024335 Sechium edule HOM05D004207 ORTHO05D005188 5.1e-85 318.5 186 76.3
vmacro07779 Vaccinium macrocarpon HOM05D004207 ORTHO05D005188 8.7e-85 317.8 264 63.6
Solyc10g078400.2 Solanum lycopersicum HOM05D004207 ORTHO05D005188 1.1e-84 317.4 251 63.7
MBI13_g09213_MAGBIO Magnolia biondii HOM05D004207 ORTHO05D005188 1.5e-84 317.0 249 64.3
Sopen10g029060 Solanum pennellii HOM05D004207 ORTHO05D005188 1.5e-84 317.0 251 62.9
PSO384G4208 Papaver somniferum HOM05D004207 ORTHO05D005188 3.3e-84 315.8 249 63.9
FAN20G2214 Fragaria x ananassa HOM05D004207 ORTHO05D005188 4.3e-84 315.5 239 65.3
AUR62018367 Chenopodium quinoa HOM05D004207 ORTHO05D005188 2.1e-83 313.2 243 62.1
FAN18G2175 Fragaria x ananassa HOM05D004207 ORTHO05D005188 2.8e-83 312.8 240 67.1
Ciclev10011666m.g Citrus clementina HOM05D004207 ORTHO05D005188 3.6e-83 312.4 248 63.7
PSO339G0215 Papaver somniferum HOM05D004207 ORTHO05D005188 1.1e-82 310.8 248 63.3
FvH4_5g30880 Fragaria vesca HOM05D004207 ORTHO05D005188 1.8e-82 310.1 240 66.7
EL10Ac3g07257 Beta vulgaris HOM05D004207 ORTHO05D005188 3.1e-82 309.3 240 63.8
AUR62030295 Chenopodium quinoa HOM05D004207 ORTHO05D005188 3.1e-82 309.3 249 60.2
PGSC0003DMG400008376 Solanum tuberosum HOM05D004207 ORTHO05D005188 1.2e-81 307.4 254 61.4
Hund24581 Selenicereus undatus HOM05D004207 ORTHO05D005188 7.6e-81 304.7 244 62.3
ATR0307G046 Amborella trichopoda HOM05D004207 ORTHO05D005188 1.3e-80 303.9 182 78.0
CDE02G0307 Ceratophyllum demersum HOM05D004207 ORTHO05D005188 1.7e-80 303.5 187 75.4
THA.LOC104824395 Tarenaya hassleriana HOM05D004207 ORTHO05D005188 1.7e-80 303.5 252 60.7
THA.LOC104803259 Tarenaya hassleriana HOM05D004207 ORTHO05D005188 2.2e-80 303.1 252 61.1
unitig_744.g24179 Utricularia gibba HOM05D004207 ORTHO05D005188 1.1e-79 300.8 239 62.3
Sc13g0001060 Simmondsia chinensis HOM05D004207 ORTHO05D005188 1.9e-79 300.1 187 73.8
Thhalv10016761m.g Eutrema salsugineum HOM05D004207 ORTHO05D005188 1.7e-77 293.5 247 60.7
AL5G38110 Arabidopsis lyrata HOM05D004207 ORTHO05D005188 6.6e-77 291.6 250 60.4
Carub.0004s2346 Capsella rubella HOM05D004207 ORTHO05D005188 6.6e-77 291.6 250 57.6
AL4G39120 Arabidopsis lyrata HOM05D004207 ORTHO05D005188 1.5e-76 290.4 250 58.8
Aa31LG10G11590 Aethionema arabicum HOM05D004207 ORTHO05D005188 2.5e-76 289.7 217 65.4
AT3G56750 Arabidopsis thaliana HOM05D004207 ORTHO05D005188 3.3e-76 289.3 217 65.9
Carub.0005s2349 Capsella rubella HOM05D004207 ORTHO05D005188 9.6e-76 287.7 250 59.6
Ah.13g077190 Amaranthus hybridus HOM05D002757 ORTHO05D003252 3.6e-75 285.8 188 69.7
Sp5g05820 Schrenkiella parvula HOM05D004207 ORTHO05D005188 6.2e-75 285.0 217 65.9
BcaC07g40120 Brassica carinata HOM05D004207 ORTHO05D005188 8.1e-75 284.6 252 59.1
C08p31970 Brassica napus HOM05D004207 ORTHO05D005188 8.1e-75 284.6 250 59.6
BcaC07g39983 Brassica carinata HOM05D004207 ORTHO05D005188 1.1e-74 284.3 252 59.1
BcaB02g07638 Brassica carinata HOM05D004207 ORTHO05D005188 2.4e-74 283.1 250 59.2
A05p02060 Brassica napus HOM05D004207 ORTHO05D005188 5.3e-74 282.0 244 57.8
Ah.04g150870 Amaranthus hybridus HOM05D000591 ORTHO05D000579 6.9e-74 281.6 177 71.2
BcaC08g44805 Brassica carinata HOM05D004207 ORTHO05D005188 1.2e-73 280.8 253 58.1
BolC6t37545H Brassica oleracea HOM05D004207 ORTHO05D005188 1.2e-73 280.8 253 58.1
AT2G41150 Arabidopsis thaliana HOM05D004207 ORTHO05D005188 1.5e-73 280.4 229 59.8
C06p23760 Brassica napus HOM05D004207 ORTHO05D005188 2.0e-73 280.0 250 58.0
Thhalv10006019m.g Eutrema salsugineum HOM05D004207 ORTHO05D005188 2.0e-73 280.0 252 57.9
SHI31312 Sapria himalayana HOM05D004207 ORTHO05D005188 2.6e-73 279.6 184 71.7
A07p23050 Brassica napus HOM05D004207 ORTHO05D005188 3.4e-73 279.3 250 58.0
BraA05t19202Z Brassica rapa HOM05D004207 ORTHO05D005188 4.5e-73 278.9 244 57.8
BraA07t29968Z Brassica rapa HOM05D004207 ORTHO05D005188 5.8e-73 278.5 253 58.1
Lj2A402G44 Lonicera japonica HOM05D004207 ORTHO05D005188 9.9e-73 277.7 218 62.8
CARHR136240 Cardamine hirsuta HOM05D004207 ORTHO05D005188 2.2e-72 276.6 252 58.3
Zm00001eb017860 Zea mays HOM05D004207 ORTHO05D005188 6.4e-72 275.0 238 57.6
Os03g0366700 Oryza sativa ssp. japonica HOM05D004207 ORTHO05D005188 1.4e-71 273.9 184 69.6
Lj6C571T2 Lonicera japonica HOM05D004207 ORTHO05D005188 2.4e-71 273.1 214 64.0
C04p02450 Brassica napus HOM05D004207 ORTHO05D005188 4.2e-71 272.3 198 65.7
BolC4t21890H Brassica oleracea HOM05D004207 ORTHO05D005188 1.6e-70 270.4 244 56.1
BcaC02g12755 Brassica carinata HOM05D004207 ORTHO05D005188 4.6e-70 268.9 248 55.2
SEGI_12806 Sequoiadendron giganteum HOM05D004207 ORTHO05D005188 3.0e-69 266.2 248 52.4
ECA238G2339 Erigeron canadensis HOM05D004207 ORTHO05D000645 3.1e-66 256.1 164 74.4
BcaB01g01392 Brassica carinata HOM05D005156 ORTHO05D006710 9.0e-66 254.6 174 70.1
CiPaw.09G048900 Carya illinoinensis HOM05D004207 ORTHO05D005188 1.2e-62 244.2 148 78.4
SGA_v2.0_scaffold66G22265 Striga asiatica HOM05D004207 ORTHO05D002907 3.0e-61 239.6 253 54.2
BcaB06g27278 Brassica carinata HOM05D004207 ORTHO05D005188 8.7e-61 238.0 177 66.1
Haze_20240 Corylus avellana HOM05D004207 ORTHO05D005188 3.3e-60 236.1 140 80.7
BraA09t40412Z Brassica rapa HOM05D004207 ORTHO05D005188 3.1e-58 229.6 216 57.4
BolC8t50815H Brassica oleracea HOM05D004207 ORTHO05D005188 2.0e-57 226.9 218 55.5
Zm00001eb109900 Zea mays HOM05D004207 ORTHO05D005188 4.6e-54 215.7 152 64.5
AagrBONN_evm.TU.Sc2ySwM_362.2903 Anthoceros agrestis HOM05D004207 ORTHO05D005188 1.1e-50 204.5 219 48.4
SMO119G0213 Selaginella moellendorffii HOM05D004207 ORTHO05D005188 3.1e-50 203.0 194 53.1
TAR071G0001 Trochodendron aralioides HOM05D004207 ORTHO05D005188 4.1e-50 202.6 164 62.2
CARHR159490 Cardamine hirsuta HOM05D004207 ORTHO05D005188 3.4e-49 199.5 136 72.1
Peaxi162Scf00003g04926 Petunia axillaris HOM05D004207 ORTHO05D005188 5.9e-49 198.7 243 44.9
Os07g0641000 Oryza sativa ssp. japonica HOM05D004207 ORTHO05D005188 1.8e-45 187.2 146 61.0
Pp3c2_30150 Physcomitrium patens HOM05D004207 ORTHO05D005188 2.6e-44 183.3 243 44.0
TWI53G0562 Tripterygium wilfordii HOM05D004207 ORTHO05D005188 1.3e-43 181.0 251 45.8
QL06p027270 Quercus lobata HOM05D004207 ORTHO05D005188 4.1e-42 176.0 113 71.7
CSS0011177 Camellia sinensis var. sinensis HOM05D004207 ORTHO05D005188 1.2e-38 164.5 106 67.9
CSS0022112 Camellia sinensis var. sinensis HOM05D004207 ORTHO05D005188 1.2e-38 164.5 106 67.9
CSS0017049 Camellia sinensis var. sinensis HOM05D004207 ORTHO05D005188 1.6e-38 164.1 106 67.9
CSS0007811 Camellia sinensis var. sinensis HOM05D004207 ORTHO05D005188 1.0e-37 161.4 106 66.0
CSS0037189 Camellia sinensis var. sinensis HOM05D004207 ORTHO05D005188 3.9e-37 159.5 106 67.0
FAN04G1206 Fragaria x ananassa HOM05D004207 ORTHO05D005188 7.4e-36 155.2 105 72.4
A09p49590 Brassica napus HOM05D004207 ORTHO05D005188 4.8e-35 152.5 250 39.2
MD14G1091500 Malus domestica HOM05D004207 ORTHO05D005188 2.6e-33 146.7 242 39.7
BcaC01g05358 Brassica carinata HOM05D004207 ORTHO05D005188 3.6e-30 136.3 101 64.4
Cc00_g24130 Coffea canephora HOM05D004207 ORTHO05D005188 9.1e-26 121.7 92 63.0
Cc00_g13290 Coffea canephora HOM05D004207 ORTHO05D005188 3.2e-23 113.2 89 61.8
CDE08G0867 Ceratophyllum demersum HOM05D004207 ORTHO05D005188 3.6e-22 109.8 76 69.7
Nn2g14966 Nelumbo nucifera HOM05D004207 ORTHO05D005188 1.8e-21 107.5 114 50.9
FAN27G3487 Fragaria x ananassa HOM05D004207 ORTHO05D005188 1.3e-16 91.3 235 33.6
Cc06_g19690 Coffea canephora HOM05D004207 ORTHO05D005188 7.2e-15 85.5 124 41.1
Zm00001eb328890 Zea mays HOM05D004207 ORTHO05D005188 3.1e-10 70.1 36 83.3


User provided reference genes

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