Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_25802_v3 Cicer arietinum L. HOM05D006946 ORTHO05D008634 3.2e-209 731.5 361 100.0
Medtr8g006950 Medicago truncatula HOM05D006946 ORTHO05D008634 1.6e-173 612.8 362 84.5
TPR.G33124 Trifolium pratense HOM05D006946 ORTHO05D008634 1.5e-171 606.3 362 83.7
VMungo0331G1797 Vigna mungo HOM05D006946 ORTHO05D008634 8.2e-149 530.8 360 72.5
Psat4g224200 Pisum sativum HOM05D006946 ORTHO05D008634 2.4e-148 529.3 409 69.4
Phvul.010G049700 Phaseolus vulgaris HOM05D006946 ORTHO05D008634 1.1e-145 520.4 357 71.1
Glyma.03G110700 Glycine max HOM05D006946 ORTHO05D008634 1.0e-143 513.8 360 71.9
Lj3g0014310 Lotus japonicus HOM05D006946 ORTHO05D008634 6.3e-141 504.6 425 62.8
arahy.Tifrunner.gnm1.ann1.GB8G30 Arachis hypogaea HOM05D006946 ORTHO05D008634 2.4e-140 502.7 356 70.5
arahy.Tifrunner.gnm1.ann1.4A1F8H Arachis hypogaea HOM05D006946 ORTHO05D008634 7.0e-140 501.1 356 69.9
Lalb_Chr07g0195411 Lupinus albus HOM05D006946 ORTHO05D008634 7.5e-134 481.1 360 67.2
Medtr5g027110 Medicago truncatula HOM05D006946 ORTHO05D008634 5.2e-119 431.8 245 86.5
QL04p030124 Quercus lobata HOM05D006946 ORTHO05D008634 3.6e-104 382.5 361 56.5
Atru.chr5.122 Acer truncatum HOM05D006946 ORTHO05D008634 4.0e-103 379.0 363 54.5
Ciclev10020918m.g Citrus clementina HOM05D006946 ORTHO05D008634 1.5e-102 377.1 360 54.2
GSVIVG01018284001 Vitis vinifera HOM05D006946 ORTHO05D008634 5.8e-102 375.2 360 53.9
Thecc.01G395400 Theobroma cacao HOM05D006946 ORTHO05D008634 8.3e-101 371.3 356 55.1
Actinidia32506 Actinidia chinensis HOM05D006946 ORTHO05D008634 5.1e-98 362.1 356 54.2
PGR042G0965 Punica granatum HOM05D006946 ORTHO05D008634 6.6e-98 361.7 364 52.5
Haze_02851 Corylus avellana HOM05D006946 ORTHO05D008634 6.2e-96 355.1 359 51.5
CANSAT25G1232 Cannabis sativa HOM05D006946 ORTHO05D008634 4.0e-95 352.4 359 51.3
Duzib133G0968 Durio zibethinus HOM05D006946 ORTHO05D008634 5.2e-95 352.1 360 52.8
Cfa011066 Carpinus fangiana HOM05D006946 ORTHO05D008634 4.4e-94 349.0 430 46.7
COL.COLO4_12403 Corchorus olitorius HOM05D006946 ORTHO05D008634 4.4e-94 349.0 359 52.6
FAN06G0853 Fragaria x ananassa HOM05D006946 ORTHO05D008634 1.3e-93 347.4 360 51.1
CSS0010598 Camellia sinensis var. sinensis HOM05D006946 ORTHO05D008634 2.2e-93 346.7 359 51.8
FvH4_7g10220 Fragaria vesca HOM05D006946 ORTHO05D008634 4.9e-93 345.5 360 50.8
Gorai.008G109100 Gossypium raimondii HOM05D006946 ORTHO05D008634 6.4e-93 345.1 359 54.0
FAN03G2893 Fragaria x ananassa HOM05D006946 ORTHO05D008634 1.9e-92 343.6 360 49.7
FAN06G0591 Fragaria x ananassa HOM05D006946 ORTHO05D008634 1.9e-92 343.6 360 50.8
FAN10G1802 Fragaria x ananassa HOM05D006946 ORTHO05D008634 1.9e-92 343.6 355 50.4
FAN10G0617 Fragaria x ananassa HOM05D006946 ORTHO05D008634 2.4e-92 343.2 355 50.7
Gohir.D12G100200 Gossypium hirsutum HOM05D006946 ORTHO05D008634 5.4e-92 342.0 293 59.7
vmacro13499 Vaccinium macrocarpon HOM05D006946 ORTHO05D008634 1.2e-91 340.9 359 48.7
TAR629G0179 Trochodendron aralioides HOM05D006946 ORTHO05D008634 1.0e-90 337.8 370 49.2
THA.LOC104817188 Tarenaya hassleriana HOM05D006946 ORTHO05D008634 2.3e-90 336.7 359 50.1
Rhsim07G0036200 Rhododendron simsii HOM05D006946 ORTHO05D008634 1.5e-89 334.0 359 48.5
TWI14G0580 Tripterygium wilfordii HOM05D006946 ORTHO05D008634 3.3e-89 332.8 348 52.3
RcHm_v2.0_Chr1g0347961 Rosa chinensis HOM05D006946 ORTHO05D008634 7.3e-89 331.6 358 48.9
Aqoxy1G01627 Aquilegia oxysepala HOM05D006946 ORTHO05D008634 9.6e-89 331.3 368 49.2
ECA240G0199 Erigeron canadensis HOM05D006946 ORTHO05D008634 2.1e-88 330.1 338 51.5
Aqoxy5G04137 Aquilegia oxysepala HOM05D006946 ORTHO05D008634 2.8e-88 329.7 367 50.1
Potri.002G138000 Populus trichocarpa HOM05D006946 ORTHO05D008634 3.6e-88 329.3 363 49.0
Nitab4.5_0007027g0020 Nicotiana tabacum HOM05D006946 ORTHO05D008634 3.1e-87 326.2 353 50.7
HanXRQChr13g0423251 Helianthus annuus HOM05D006946 ORTHO05D008634 6.9e-87 325.1 334 51.8
Cc02_g25140 Coffea canephora HOM05D006946 ORTHO05D008634 1.2e-86 324.3 359 50.1
Hma1.2p1_0072F.1_g038310 Hydrangea macrophylla HOM05D006946 ORTHO05D008634 2.2e-85 320.1 360 48.6
MSTRG.20688 Avicennia marina HOM05D006946 ORTHO05D008634 4.9e-85 318.9 356 48.9
Gohir.A12G097300 Gossypium hirsutum HOM05D006946 ORTHO05D008634 8.4e-85 318.2 249 61.0
Eucgr.E01546 Eucalyptus grandis HOM05D006946 ORTHO05D008634 1.1e-84 317.8 366 49.5
PGSC0003DMG400025996 Solanum tuberosum HOM05D006946 ORTHO05D008634 1.1e-84 317.8 332 50.3
CARHR170620 Cardamine hirsuta HOM05D006946 ORTHO05D008634 3.2e-84 316.2 274 53.6
Carub.0005s2704 Capsella rubella HOM05D006946 ORTHO05D008634 5.4e-84 315.5 278 53.6
PSO717G0092 Papaver somniferum HOM05D006946 ORTHO05D008634 1.2e-83 314.3 365 46.6
CAN.G1473.5 Capsicum annuum HOM05D006946 ORTHO05D008634 2.1e-83 313.5 322 52.5
Sc02g0003120 Simmondsia chinensis HOM05D006946 ORTHO05D008634 2.7e-83 313.2 375 44.8
PSO675G1257 Papaver somniferum HOM05D006946 ORTHO05D008634 3.5e-83 312.8 363 47.1
Solyc01g090220.4 Solanum lycopersicum HOM05D006946 ORTHO05D008634 4.6e-83 312.4 330 50.3
AT3G60300 Arabidopsis thaliana HOM05D006946 ORTHO05D008634 3.0e-82 309.7 286 51.7
Migut.B01532 Erythranthe guttata HOM05D006946 ORTHO05D008634 1.9e-81 307.0 357 48.2
Sopen01g036020 Solanum pennellii HOM05D006946 ORTHO05D008634 3.3e-81 306.2 355 46.5
Sp5g02920 Schrenkiella parvula HOM05D006946 ORTHO05D008634 7.3e-81 305.1 356 45.2
Nn1g00836 Nelumbo nucifera HOM05D006946 ORTHO05D008634 1.6e-80 303.9 360 44.4
vmacro13524 Vaccinium macrocarpon HOM05D006946 ORTHO05D008634 2.1e-80 303.5 419 40.8
Thhalv10006060m.g Eutrema salsugineum HOM05D006946 ORTHO05D008634 8.1e-80 301.6 279 52.3
Aa31LG10G14420 Aethionema arabicum HOM05D006946 ORTHO05D008634 1.2e-78 297.7 355 45.1
SalBow5G3575 Salvia bowleyana HOM05D006946 ORTHO05D008634 3.8e-77 292.7 373 45.8
Zm00001eb200010 Zea mays HOM05D006946 ORTHO05D008634 3.2e-76 289.7 362 47.2
Lsat_1_v5_gn_3_126900 Lactuca sativa HOM05D006946 ORTHO05D008634 4.2e-76 289.3 361 46.0
Sabra02G0106500 Salix brachista HOM05D006946 ORTHO05D008634 5.4e-76 288.9 444 40.3
C04p32350 Brassica napus HOM05D006946 ORTHO05D008634 2.1e-72 276.9 357 43.1
A04p01710 Brassica napus HOM05D006946 ORTHO05D008634 2.8e-72 276.6 274 48.9
AL5G42520 Arabidopsis lyrata HOM05D006946 ORTHO05D008634 4.8e-72 275.8 274 50.0
EL10Ac1g00757 Beta vulgaris HOM05D006946 ORTHO05D008634 6.2e-72 275.4 331 45.9
BolC4t24784H Brassica oleracea HOM05D006946 ORTHO05D008634 8.1e-72 275.0 297 47.5
CiPaw.14G020200 Carya illinoinensis HOM05D006946 ORTHO05D008634 1.5e-70 270.8 204 61.8
SGA_v2.0_scaffold340G49324 Striga asiatica HOM05D006946 ORTHO05D008634 5.8e-70 268.9 386 40.9
Ah.05g177890 Amaranthus hybridus HOM05D006946 ORTHO05D008634 2.9e-69 266.5 309 46.0
ATR0057G021 Amborella trichopoda HOM05D006946 ORTHO05D008634 6.4e-69 265.4 345 43.5
Nitab4.5_0000920g0010 Nicotiana tabacum HOM05D006946 ORTHO05D008634 8.4e-69 265.0 370 43.2
BraA04t15895Z Brassica rapa HOM05D006946 ORTHO05D008634 1.1e-68 264.6 292 45.5
AUR62023403 Chenopodium quinoa HOM05D006946 ORTHO05D008634 1.8e-66 257.3 295 46.8
Actinidia18349 Actinidia chinensis HOM05D006946 ORTHO05D008634 2.8e-64 250.0 260 53.1
HPP92_022105 Vanilla planifolia HOM05D006946 ORTHO05D008634 4.8e-64 249.2 361 39.9
unitig_750.g28410 Utricularia gibba HOM05D006946 ORTHO05D008634 6.2e-64 248.8 366 41.3
Manes.05G055200 Manihot esculenta HOM05D006946 ORTHO05D008634 1.4e-63 247.7 263 52.1
HPP92_022132 Vanilla planifolia HOM05D006946 ORTHO05D008634 1.8e-63 247.3 334 41.9
Prupe.2G132200 Prunus persica HOM05D006946 ORTHO05D008634 9.0e-63 245.0 264 49.2
Dinv43613 Davidia involucrata HOM05D006946 ORTHO05D008634 3.5e-59 233.0 250 51.2
Peaxi162Scf00475g00422 Petunia axillaris HOM05D000253 ORTHO05D000149 2.1e-56 223.8 425 36.2
Lj9A556T13 Lonicera japonica HOM05D006946 ORTHO05D008634 7.2e-52 208.8 263 45.6
AUR62013748 Chenopodium quinoa HOM05D006946 ORTHO05D008634 9.3e-52 208.4 365 37.0
Mapoly0040s0025 Marchantia polymorpha HOM05D006946 ORTHO05D008634 9.3e-52 208.4 348 39.1
Hund27407 Selenicereus undatus HOM05D006946 ORTHO05D008634 1.1e-49 201.4 568 29.8
Hma1.2p1_0072F.1_g038320 Hydrangea macrophylla HOM05D006946 ORTHO05D008634 3.3e-49 199.9 181 55.8
AagrBONN_evm.TU.Sc2ySwM_117.2461 Anthoceros agrestis HOM05D006946 ORTHO05D008634 1.4e-44 184.5 273 39.2
Psat1g142640 Pisum sativum HOM05D006946 ORTHO05D008634 8.2e-40 168.7 120 73.3
PSO017G5203 Papaver somniferum HOM05D006946 ORTHO05D008634 4.1e-39 166.4 182 47.3
SMO352G0084 Selaginella moellendorffii HOM05D006946 ORTHO05D008634 2.9e-37 160.2 162 51.2
Potri.014G048000 Populus trichocarpa HOM05D006946 ORTHO05D008634 1.6e-35 154.5 242 40.9
Psat2g026240 Pisum sativum HOM05D006946 ORTHO05D008634 1.0e-34 151.8 104 76.0
CBR_g38735 Chara braunii HOM05D000019 ORTHO05D000353 3.9e-34 149.8 350 30.0
Psat1g142600 Pisum sativum HOM05D006946 ORTHO05D008634 3.9e-34 149.8 111 72.1
Cpa.g.sc22.65 Carica papaya HOM05D006946 ORTHO05D008634 2.6e-25 120.6 235 36.6
Cpa.g.sc22.64 Carica papaya HOM05D006946 ORTHO05D008634 1.3e-24 118.2 105 53.3
MCO13G420 Micromonas commoda HOM05D006946 ORTHO05D008634 1.8e-23 114.4 168 36.9
Psat6g138360 Pisum sativum HOM05D000346 ORTHO05D008634 3.1e-23 113.6 77 76.6
Psat0s4856g0040 Pisum sativum HOM05D006946 ORTHO05D008634 2.5e-20 104.0 73 74.0
Psat5g300840 Pisum sativum HOM05D006946 ORTHO05D008634 1.6e-19 101.3 64 76.6
MD02G1213400 Malus domestica HOM05D006946 ORTHO05D008634 2.0e-17 94.4 117 46.2
Cre13.g581801 Chlamydomonas reinhardtii HOM05D006946 ORTHO05D008634 1.1e-15 88.6 232 29.7
SEGI_22555 Sequoiadendron giganteum HOM05D006946 ORTHO05D000002 8.0e-11 72.4 126 40.5
AUR62044571 Chenopodium quinoa HOM05D006946 ORTHO05D008634 5.7e-09 66.2 247 26.3
Psat1g198480 Pisum sativum HOM05D000724 ORTHO05D012138 1.7e-08 64.7 83 44.6
PRCOL_00003801 Prasinoderma coloniale HOM05D013257 ORTHO05D015313 2.8e-08 63.9 220 23.6
QL04p089514 Quercus lobata HOM05D006946 ORTHO05D008634 5.9e-06 56.2 37 64.9


User provided reference genes

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