Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_25734_v3 Cicer arietinum L. HOM05D006349 ORTHO05D008205 3.3e-83 312.0 196 100.0
Psat7g112120 Pisum sativum HOM05D006349 ORTHO05D008205 3.1e-65 252.3 197 83.2
TPR.G11993 Trifolium pratense HOM05D006349 ORTHO05D008205 1.4e-62 243.4 186 83.9
Medtr4g089080 Medicago truncatula HOM05D006349 ORTHO05D008205 9.2e-62 240.7 196 82.1
Lj1g0000266 Lotus japonicus HOM05D006349 ORTHO05D008205 5.8e-56 221.5 198 77.8
Glyma.06G190300 Glycine max HOM05D006349 ORTHO05D008205 4.9e-55 218.4 196 76.0
Phvul.009G190100 Phaseolus vulgaris HOM05D006349 ORTHO05D008205 4.9e-55 218.4 200 75.5
arahy.Tifrunner.gnm1.ann1.GD5F3R Arachis hypogaea HOM05D006349 ORTHO05D008205 1.4e-54 216.9 200 73.0
Glyma.04G174400 Glycine max HOM05D006349 ORTHO05D008205 1.4e-54 216.9 196 76.0
arahy.Tifrunner.gnm1.ann1.FR12T1 Arachis hypogaea HOM05D006349 ORTHO05D008205 1.3e-52 210.3 202 72.8
Lalb_Chr08g0235931 Lupinus albus HOM05D006349 ORTHO05D008205 1.3e-52 210.3 199 72.4
Gohir.D13G009000 Gossypium hirsutum HOM05D006349 ORTHO05D008205 1.1e-51 207.2 199 70.4
Gorai.013G009800 Gossypium raimondii HOM05D006349 ORTHO05D008205 1.1e-51 207.2 199 70.4
Gohir.A13G008300 Gossypium hirsutum HOM05D006349 ORTHO05D008205 1.9e-51 206.5 199 70.9
PGR083G1017 Punica granatum HOM05D006349 ORTHO05D008205 2.5e-51 206.1 204 69.1
CANSAT80G2583 Cannabis sativa HOM05D006349 ORTHO05D008205 8.1e-50 201.1 158 80.4
Potri.015G065100 Populus trichocarpa HOM05D006349 ORTHO05D008205 1.8e-49 199.9 198 70.2
QL10p015567 Quercus lobata HOM05D006349 ORTHO05D008205 3.1e-49 199.1 200 71.0
Cpa.g.sc17.203 Carica papaya HOM05D006349 ORTHO05D008205 6.9e-49 198.0 202 70.3
Duzib068G1139 Durio zibethinus HOM05D006349 ORTHO05D008205 3.4e-48 195.7 198 68.2
Eucgr.B00425 Eucalyptus grandis HOM05D006349 ORTHO05D008205 9.9e-48 194.1 197 68.5
Ciclev10022359m.g Citrus clementina HOM05D006349 ORTHO05D008205 1.3e-47 193.7 199 68.3
FAN04G0897 Fragaria x ananassa HOM05D006349 ORTHO05D008205 2.9e-47 192.6 168 76.2
Potri.012G070600 Populus trichocarpa HOM05D006349 ORTHO05D008205 3.8e-47 192.2 198 66.7
FAN13G0390 Fragaria x ananassa HOM05D006349 ORTHO05D008205 1.1e-46 190.7 168 75.0
A07p40410 Brassica napus HOM05D006349 ORTHO05D008205 1.4e-46 190.3 196 66.8
GSVIVG01008063001 Vitis vinifera HOM05D006349 ORTHO05D008205 1.4e-46 190.3 198 66.2
Hma1.2p1_0104F.1_g050210 Hydrangea macrophylla HOM05D006349 ORTHO05D008205 1.9e-46 189.9 192 67.7
RcHm_v2.0_Chr7g0180591 Rosa chinensis HOM05D006349 ORTHO05D008205 3.2e-46 189.1 184 69.6
BraA07t31583Z Brassica rapa HOM05D006349 ORTHO05D008205 5.4e-46 188.3 199 66.8
Sabra15G0090500 Salix brachista HOM05D006349 ORTHO05D008205 5.4e-46 188.3 198 66.7
CiPaw.11G038000 Carya illinoinensis HOM05D006349 ORTHO05D008205 7.1e-46 188.0 198 68.7
PGSC0003DMG400025345 Solanum tuberosum HOM05D006349 ORTHO05D008205 9.3e-46 187.6 193 67.9
Atru.chr9.2318 Acer truncatum HOM05D006349 ORTHO05D008205 1.6e-45 186.8 196 66.3
BolC6t39912H Brassica oleracea HOM05D006349 ORTHO05D008205 1.6e-45 186.8 196 65.8
FvH4_5g15500 Fragaria vesca HOM05D006349 ORTHO05D008205 1.6e-45 186.8 184 69.6
MBI19_g30284_MAGBIO Magnolia biondii HOM05D006349 ORTHO05D008205 2.7e-45 186.0 185 68.6
Solyc03g113240.3 Solanum lycopersicum HOM05D006349 ORTHO05D008205 2.7e-45 186.0 196 67.3
Sopen03g032300 Solanum pennellii HOM05D006349 ORTHO05D008205 2.7e-45 186.0 196 67.3
BcaC08g46899 Brassica carinata HOM05D006349 ORTHO05D008205 3.5e-45 185.7 196 65.8
C06p48760 Brassica napus HOM05D006349 ORTHO05D008205 3.5e-45 185.7 196 65.8
DCAR_015995 Daucus carota HOM05D006349 ORTHO05D008205 3.5e-45 185.7 196 65.8
Nn4g23038 Nelumbo nucifera HOM05D006349 ORTHO05D008205 3.5e-45 185.7 196 66.8
CAN.G999.48 Capsicum annuum HOM05D006349 ORTHO05D008205 4.6e-45 185.3 192 67.7
FAN18G4547 Fragaria x ananassa HOM05D006349 ORTHO05D008205 4.6e-45 185.3 184 69.0
Nitab4.5_0000785g0220 Nicotiana tabacum HOM05D006349 ORTHO05D008205 4.6e-45 185.3 194 68.6
ClCG01G014390 Citrullus lanatus HOM05D006349 ORTHO05D008205 6.0e-45 184.9 192 66.7
Nitab4.5_0004605g0070 Nicotiana tabacum HOM05D006349 ORTHO05D008205 6.0e-45 184.9 195 69.2
COL.COLO4_05705 Corchorus olitorius HOM05D006349 ORTHO05D008205 1.0e-44 184.1 199 67.3
Peaxi162Scf00009g00321 Petunia axillaris HOM05D006349 ORTHO05D008205 1.0e-44 184.1 192 68.2
Sed0016194 Sechium edule HOM05D006349 ORTHO05D008205 1.0e-44 184.1 201 66.2
BraA02t06992Z Brassica rapa HOM05D006349 ORTHO05D008205 1.3e-44 183.7 196 64.8
Migut.D01854 Erythranthe guttata HOM05D006349 ORTHO05D008205 1.3e-44 183.7 156 77.6
Manes.06G096400 Manihot esculenta HOM05D006349 ORTHO05D008205 1.3e-44 183.7 199 67.3
MELO3C002208.2 Cucumis melo HOM05D006349 ORTHO05D008205 1.7e-44 183.3 166 72.3
CsaV3_1G007920 Cucumis sativus L. HOM05D006349 ORTHO05D008205 3.9e-44 182.2 193 66.3
HanXRQChr09g0271121 Helianthus annuus HOM05D006349 ORTHO05D008205 3.9e-44 182.2 196 64.8
Sp5g29850 Schrenkiella parvula HOM05D006349 ORTHO05D008205 3.9e-44 182.2 199 65.3
EL10Ac5g10944 Beta vulgaris HOM05D006349 ORTHO05D008205 6.6e-44 181.4 184 66.8
MD06G1188100 Malus domestica HOM05D006349 ORTHO05D008205 8.7e-44 181.0 200 63.5
AUR62021741 Chenopodium quinoa HOM05D006349 ORTHO05D008205 1.1e-43 180.6 194 64.9
Thecc.03G079100 Theobroma cacao HOM05D006349 ORTHO05D008205 3.3e-43 179.1 198 63.6
Actinidia37657 Actinidia chinensis HOM05D006349 ORTHO05D008205 4.3e-43 178.7 151 78.1
BcaC03g15525 Brassica carinata HOM05D006349 ORTHO05D008205 4.3e-43 178.7 198 64.6
C02p32090 Brassica napus HOM05D006349 ORTHO05D008205 4.3e-43 178.7 198 64.6
vmacro19434 Vaccinium macrocarpon HOM05D006349 ORTHO05D008205 9.6e-43 177.6 154 78.6
AL2G34620 Arabidopsis lyrata HOM05D006349 ORTHO05D008205 1.3e-42 177.2 196 63.3
BolC2t09244H Brassica oleracea HOM05D006349 ORTHO05D008205 1.6e-42 176.8 198 63.6
Sc12g0006210 Simmondsia chinensis HOM05D006349 ORTHO05D008205 1.6e-42 176.8 196 63.8
CARHR068050 Cardamine hirsuta HOM05D006349 ORTHO05D008205 2.1e-42 176.4 197 63.5
CSS0001294 Camellia sinensis var. sinensis HOM05D006349 ORTHO05D008205 2.8e-42 176.0 149 79.2
Carub.0002s2152 Capsella rubella HOM05D006349 ORTHO05D008205 2.8e-42 176.0 194 61.9
Cfa018991 Carpinus fangiana HOM05D006349 ORTHO05D008205 3.6e-42 175.6 159 73.6
Cc04_g15550 Coffea canephora HOM05D006349 ORTHO05D008205 3.6e-42 175.6 156 75.0
AT1G74730 Arabidopsis thaliana HOM05D006349 ORTHO05D008205 8.1e-42 174.5 196 62.8
Dinv38665 Davidia involucrata HOM05D006349 ORTHO05D008205 8.1e-42 174.5 146 80.1
Hund02668 Selenicereus undatus HOM05D006349 ORTHO05D008205 8.1e-42 174.5 193 64.8
CDE07G1088 Ceratophyllum demersum HOM05D006349 ORTHO05D008205 1.8e-41 173.3 196 61.7
Oeu006473.1 Olea europaea HOM05D006349 ORTHO05D008205 5.3e-41 171.8 154 75.3
TWI81G0140 Tripterygium wilfordii HOM05D006349 ORTHO05D008205 5.3e-41 171.8 198 61.6
ATR1120G128 Amborella trichopoda HOM05D006349 ORTHO05D008205 1.2e-40 170.6 198 60.6
Zm00001eb160550 Zea mays HOM05D006349 ORTHO05D008205 1.2e-40 170.6 172 67.4
Aqoxy3G03265 Aquilegia oxysepala HOM05D006349 ORTHO05D008205 1.5e-40 170.2 196 60.7
BcaB05g24870 Brassica carinata HOM05D003553 ORTHO05D005072 2.0e-40 169.9 198 62.1
Lsat_1_v5_gn_4_107320 Lactuca sativa HOM05D006349 ORTHO05D008205 2.6e-40 169.5 152 73.0
ECA232G0565 Erigeron canadensis HOM05D006349 ORTHO05D008205 3.4e-40 169.1 200 63.0
PSO781G0309 Papaver somniferum HOM05D006349 ORTHO05D008205 5.8e-40 168.3 196 57.7
HPP92_022919 Vanilla planifolia HOM05D006349 ORTHO05D008205 1.3e-39 167.2 181 64.1
HPP92_022931 Vanilla planifolia HOM05D006349 ORTHO05D008205 1.3e-39 167.2 181 64.1
Ah.02g113210 Amaranthus hybridus HOM05D006349 ORTHO05D008205 3.8e-39 165.6 173 68.2
CDE04G3639 Ceratophyllum demersum HOM05D006349 ORTHO05D008205 3.8e-39 165.6 196 60.7
SalBow7G1566 Salvia bowleyana HOM05D006349 ORTHO05D008205 3.8e-39 165.6 203 60.6
SGA_v2.0_scaffold7G04081 Striga asiatica HOM05D006349 ORTHO05D008205 6.4e-39 164.9 177 66.1
AUR62008355 Chenopodium quinoa HOM05D006349 ORTHO05D008205 8.4e-39 164.5 148 74.3
TAR622G0703 Trochodendron aralioides HOM05D006349 ORTHO05D008205 2.4e-38 162.9 196 61.2
Lj9P459T48 Lonicera japonica HOM05D006349 ORTHO05D008205 4.2e-38 162.2 149 74.5
Os01g0585300 Oryza sativa ssp. japonica HOM05D006349 ORTHO05D008205 5.4e-38 161.8 157 70.7
Prupe.5G186300 Prunus persica HOM05D006349 ORTHO05D008205 1.6e-37 160.2 189 62.4
MSTRG.4410 Avicennia marina HOM05D006349 ORTHO05D008205 7.9e-37 157.9 196 63.8
unitig_46.g18468 Utricularia gibba HOM05D006349 ORTHO05D008205 1.8e-36 156.8 198 59.1
MD14G1194200 Malus domestica HOM05D006349 ORTHO05D008205 2.3e-36 156.4 201 58.7
BcaC08g46920 Brassica carinata HOM05D006349 ORTHO05D008205 3.9e-36 155.6 134 76.1
Thhalv10019168m.g Eutrema salsugineum HOM05D006349 ORTHO05D008205 3.9e-36 155.6 198 58.6
Aa31LG4G4960 Aethionema arabicum HOM05D006349 ORTHO05D008205 2.8e-34 149.4 199 56.3
PSO541G4605 Papaver somniferum HOM05D006349 ORTHO05D008205 2.4e-33 146.4 185 56.2
Haze_07380 Corylus avellana HOM05D006349 ORTHO05D008205 3.8e-31 139.0 159 65.4
FAN08G2244 Fragaria x ananassa HOM05D006349 ORTHO05D008205 1.1e-30 137.5 168 61.3
SEGI_24937 Sequoiadendron giganteum HOM05D006349 ORTHO05D008205 8.7e-28 127.9 159 59.1
Pp3c20_23180 Physcomitrium patens HOM05D006349 ORTHO05D008205 1.4e-25 120.6 154 57.1
Actinidia04919 Actinidia chinensis HOM05D006349 ORTHO05D008205 4.0e-25 119.0 106 62.3
Mapoly0105s0011 Marchantia polymorpha HOM05D006349 ORTHO05D008205 1.4e-22 110.5 161 55.3
SMO340G0151 Selaginella moellendorffii HOM05D006349 ORTHO05D008205 1.9e-22 110.2 150 56.0
AagrBONN_evm.TU.Sc2ySwM_362.857 Anthoceros agrestis HOM05D006349 ORTHO05D008205 1.8e-20 103.6 156 55.8
CBR_g48703 Chara braunii HOM05D006349 ORTHO05D008205 6.3e-18 95.1 191 45.5
SGA_v2.0_scaffold294G47475 Striga asiatica HOM05D006349 ORTHO05D008205 1.4e-17 94.0 140 50.0
CARHR103880 Cardamine hirsuta HOM05D006349 ORTHO05D008205 2.4e-17 93.2 140 55.7
A02p19550 Brassica napus HOM05D006349 ORTHO05D008205 3.1e-17 92.8 95 54.7
Pp3c25_12400 Physcomitrium patens HOM05D006349 ORTHO05D008205 2.0e-16 90.1 121 58.7
BcaC03g15526 Brassica carinata HOM05D006349 ORTHO05D008205 2.2e-15 86.7 110 54.5
Pp3c24_420 Physcomitrium patens HOM05D006349 ORTHO05D008205 6.3e-10 68.6 63 52.4
Nn8g40820 Nelumbo nucifera HOM05D006349 ORTHO05D008205 1.4e-09 67.4 111 48.6


User provided reference genes

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