Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_25710_v3 Cicer arietinum L. HOM05D007719 ORTHO05D009782 5.9e-236 820.5 410 100.0
Psat0s3407g0080 Pisum sativum HOM05D007719 ORTHO05D009782 9.2e-205 716.8 405 90.1
Medtr1g030640 Medicago truncatula HOM05D007719 ORTHO05D009782 1.0e-203 713.4 411 88.3
TPR.G36961 Trifolium pratense HOM05D007719 ORTHO05D009782 4.3e-202 708.0 398 89.9
Lalb_Chr17g0338681 Lupinus albus HOM05D007719 ORTHO05D009782 2.3e-195 685.6 405 85.9
Glyma.09G119300 Glycine max HOM05D007719 ORTHO05D009782 1.6e-193 679.5 408 83.8
Lj2g0007830 Lotus japonicus HOM05D007719 ORTHO05D009782 3.6e-193 678.3 373 89.0
VMungo1215G2618 Vigna mungo HOM05D007719 ORTHO05D009782 1.6e-188 662.9 399 84.5
Phvul.003G022800 Phaseolus vulgaris HOM05D007719 ORTHO05D009782 8.6e-187 657.1 404 83.2
arahy.Tifrunner.gnm1.ann1.Y8VIVB Arachis hypogaea HOM05D007719 ORTHO05D009782 5.6e-186 654.4 398 82.4
QL01p001957 Quercus lobata HOM05D007719 ORTHO05D009782 1.2e-175 620.2 383 80.7
COL.COLO4_20469 Corchorus olitorius HOM05D007719 ORTHO05D009782 3.2e-173 612.1 423 73.5
arahy.Tifrunner.gnm1.ann1.L198GP Arachis hypogaea HOM05D007719 ORTHO05D009782 1.6e-172 609.8 398 78.4
Atru.chr11.428 Acer truncatum HOM05D007719 ORTHO05D009782 2.1e-172 609.4 400 75.8
ClCG01G006100 Citrullus lanatus HOM05D007719 ORTHO05D009782 7.8e-172 607.4 382 77.7
Dinv05161 Davidia involucrata HOM05D007719 ORTHO05D009782 1.3e-171 606.7 381 79.0
Gohir.A12G150300 Gossypium hirsutum HOM05D007719 ORTHO05D009782 2.3e-171 605.9 375 79.2
Gorai.008G166400 Gossypium raimondii HOM05D007719 ORTHO05D009782 2.3e-171 605.9 375 78.9
TAR629G1042 Trochodendron aralioides HOM05D007719 ORTHO05D009782 3.0e-171 605.5 377 79.6
CiPaw.05G248600 Carya illinoinensis HOM05D007719 ORTHO05D009782 3.9e-171 605.1 404 77.0
Sed0008286 Sechium edule HOM05D007719 ORTHO05D009782 5.6e-170 601.3 399 75.4
FAN12G3181 Fragaria x ananassa HOM05D007719 ORTHO05D009782 1.3e-169 600.1 391 76.7
Potri.010G114100 Populus trichocarpa HOM05D007719 ORTHO05D009782 2.1e-169 599.4 402 75.6
FvH4_4g32280 Fragaria vesca HOM05D007719 ORTHO05D009782 4.8e-169 598.2 388 77.3
FAN07G1524 Fragaria x ananassa HOM05D007719 ORTHO05D009782 4.8e-169 598.2 365 79.7
Hund24987 Selenicereus undatus HOM05D007719 ORTHO05D009782 6.2e-169 597.8 391 76.2
CSS0046068 Camellia sinensis var. sinensis HOM05D007719 ORTHO05D009782 1.1e-168 597.0 402 74.1
TWI75G0056 Tripterygium wilfordii HOM05D007719 ORTHO05D009782 1.4e-168 596.7 408 74.5
MD16G1029600 Malus domestica HOM05D007719 ORTHO05D009782 9.0e-168 594.0 377 79.0
EL10Ac3g06304 Beta vulgaris HOM05D007719 ORTHO05D009782 2.0e-167 592.8 401 74.1
FAN22G2057 Fragaria x ananassa HOM05D007719 ORTHO05D009782 4.5e-167 591.7 399 73.9
vmacro10633 Vaccinium macrocarpon HOM05D007719 ORTHO05D009782 4.5e-167 591.7 409 74.1
PGR119G0428 Punica granatum HOM05D007719 ORTHO05D009782 5.8e-167 591.3 382 76.7
CsaV3_5G028560 Cucumis sativus L. HOM05D007719 ORTHO05D009782 9.9e-167 590.5 393 74.3
Manes.15G114900 Manihot esculenta HOM05D007719 ORTHO05D009782 1.7e-166 589.7 359 80.2
Rhsim09G0099000 Rhododendron simsii HOM05D007719 ORTHO05D009782 1.4e-165 586.6 402 74.6
Actinidia36679 Actinidia chinensis HOM05D007719 ORTHO05D009782 1.9e-165 586.3 382 75.9
Eucgr.G02196 Eucalyptus grandis HOM05D007719 ORTHO05D009782 4.2e-165 585.1 395 75.4
RcHm_v2.0_Chr4g0441071 Rosa chinensis HOM05D007719 ORTHO05D009782 7.1e-165 584.3 378 76.2
ECA234G0976 Erigeron canadensis HOM05D007719 ORTHO05D009782 7.9e-164 580.9 378 75.7
Sabra10G0084100 Salix brachista HOM05D007719 ORTHO05D009782 2.5e-162 575.9 394 72.6
FAN17G2178 Fragaria x ananassa HOM05D007719 ORTHO05D009782 4.3e-162 575.1 356 78.9
Sc11g0004120 Simmondsia chinensis HOM05D007719 ORTHO05D009782 4.3e-162 575.1 399 73.4
AUR62002606 Chenopodium quinoa HOM05D007719 ORTHO05D009782 2.8e-161 572.4 399 71.4
AUR62030024 Chenopodium quinoa HOM05D007719 ORTHO05D009782 6.2e-161 571.2 406 70.4
CAN.G1334.8 Capsicum annuum HOM05D007719 ORTHO05D009782 6.9e-160 567.8 382 75.4
Cc11_g08840 Coffea canephora HOM05D007719 ORTHO05D009782 2.0e-159 566.2 372 73.9
DCAR_030215 Daucus carota HOM05D007719 ORTHO05D009782 2.0e-159 566.2 359 76.9
Lsat_1_v5_gn_4_14941 Lactuca sativa HOM05D007719 ORTHO05D009782 2.2e-158 562.8 373 74.3
Sopen05g004110 Solanum pennellii HOM05D007719 ORTHO05D009782 1.9e-157 559.7 385 73.8
ATR0686G226 Amborella trichopoda HOM05D007719 ORTHO05D009782 1.2e-156 557.0 381 71.9
Ah.07g204110 Amaranthus hybridus HOM05D007719 ORTHO05D009782 2.1e-156 556.2 407 69.8
HanXRQChr17g0566951 Helianthus annuus HOM05D007719 ORTHO05D009782 2.1e-156 556.2 374 74.3
Nitab4.5_0004776g0060 Nicotiana tabacum HOM05D007719 ORTHO05D009782 4.6e-156 555.1 348 78.4
Solyc05g008270.3 Solanum lycopersicum HOM05D007719 ORTHO05D009782 4.6e-156 555.1 385 73.2
MSTRG.23215 Avicennia marina HOM05D007719 ORTHO05D009782 7.9e-156 554.3 382 73.3
Os01g0127400 Oryza sativa ssp. japonica HOM05D007719 ORTHO05D009782 1.9e-154 549.7 349 76.5
PGSC0003DMG400030550 Solanum tuberosum HOM05D007719 ORTHO05D009782 4.3e-154 548.5 417 68.8
Oeu034423.3 Olea europaea HOM05D007719 ORTHO05D009782 1.6e-153 546.6 394 70.6
Prupe.1G323300 Prunus persica HOM05D007719 ORTHO05D009782 4.0e-152 542.0 353 79.3
SEGI_18275 Sequoiadendron giganteum HOM05D007719 ORTHO05D009782 1.2e-151 540.4 399 68.7
HPP92_021852 Vanilla planifolia HOM05D007719 ORTHO05D009782 1.3e-150 537.0 385 68.8
SalBow5G1767 Salvia bowleyana HOM05D007719 ORTHO05D009782 1.9e-149 533.1 376 73.4
SGA_v2.0_scaffold25G10737 Striga asiatica HOM05D007719 ORTHO05D009782 3.2e-149 532.3 414 68.8
Migut.O00274 Erythranthe guttata HOM05D007719 ORTHO05D009782 2.5e-146 522.7 370 73.2
unitig_61.g26194 Utricularia gibba HOM05D007719 ORTHO05D009782 6.3e-145 518.1 352 72.7
Mapoly0070s0076 Marchantia polymorpha HOM05D007719 ORTHO05D009782 3.4e-143 512.3 365 66.6
Peaxi162Scf00205g00122 Petunia axillaris HOM05D007719 ORTHO05D009782 4.5e-143 511.9 396 67.7
Pp3c1_3200 Physcomitrium patens HOM05D007719 ORTHO05D009782 7.7e-143 511.1 349 70.5
MELO3C005317.2 Cucumis melo HOM05D007719 ORTHO05D009782 1.9e-141 506.5 401 65.6
SMO236G0033 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 2.0e-135 486.5 364 65.7
SMO236G0110 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 2.0e-135 486.5 364 65.7
GSVIVG01011772001 Vitis vinifera HOM05D007719 ORTHO05D009782 7.9e-132 474.6 300 79.7
Actinidia15254 Actinidia chinensis HOM05D007719 ORTHO05D009782 3.0e-131 472.6 375 66.1
CDE04G3405 Ceratophyllum demersum HOM05D007719 ORTHO05D009782 7.0e-128 461.5 377 64.7
Zm00001eb125300 Zea mays HOM05D007719 ORTHO05D009782 7.4e-122 441.4 384 59.9
Thecc.02G280000 Theobroma cacao HOM05D007719 ORTHO05D009782 4.1e-112 409.1 268 76.1
Gohir.D12G153900 Gossypium hirsutum HOM05D007719 ORTHO05D009782 2.0e-111 406.8 241 80.9
Cpa.g.sc65.124 Carica papaya HOM05D007719 ORTHO05D009782 7.7e-111 404.8 256 77.7
SMO187G0003 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 2.1e-108 396.7 364 56.3
Haze_11019 Corylus avellana HOM05D007719 ORTHO05D009782 3.1e-104 382.9 310 67.7
AagrBONN_evm.TU.Sc2ySwM_228.3777 Anthoceros agrestis HOM05D007719 ORTHO05D009782 3.9e-94 349.4 270 65.6
Cfa008596 Carpinus fangiana HOM05D007719 ORTHO05D009782 8.0e-92 341.7 249 71.9
SEGI_23314 Sequoiadendron giganteum HOM05D007719 ORTHO05D009782 2.0e-87 327.0 231 70.1
Nn4g24120 Nelumbo nucifera HOM05D007719 ORTHO05D009782 5.8e-82 308.9 174 83.3
CBR_g12440 Chara braunii HOM05D007719 ORTHO05D009782 8.3e-81 305.1 351 47.9
Duzib268G0649 Durio zibethinus HOM05D007719 ORTHO05D009782 1.3e-65 254.6 241 57.3
GSVIVG01011775001 Vitis vinifera HOM05D007719 ORTHO05D009782 5.1e-62 242.7 145 81.4
Cfa008597 Carpinus fangiana HOM05D007719 ORTHO05D009782 9.3e-48 195.3 142 68.3
Haze_11018 Corylus avellana HOM05D007719 ORTHO05D009782 1.8e-46 191.0 152 63.8
TPR.G29132 Trifolium pratense HOM05D007719 ORTHO05D009782 7.4e-13 79.3 77 59.7


User provided reference genes

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