Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_25665_v3 Cicer arietinum L. HOM05D007039 ORTHO05D008886 2.2e-137 492.3 242 100.0
Medtr1g112080 Medicago truncatula HOM05D007039 ORTHO05D008886 1.0e-123 446.8 240 88.8
TPR.G2471 Trifolium pratense HOM05D007039 ORTHO05D008886 1.5e-122 443.0 240 89.6
Psat6g231000 Pisum sativum HOM05D007039 ORTHO05D008886 3.7e-121 438.3 240 88.3
Phvul.007G022300 Phaseolus vulgaris HOM05D007039 ORTHO05D008886 5.4e-120 434.5 242 84.3
Glyma.20G110700 Glycine max HOM05D007039 ORTHO05D008886 7.0e-120 434.1 242 86.0
VMungo0720G0617 Vigna mungo HOM05D007039 ORTHO05D008886 1.2e-119 433.3 242 85.1
Lj5g0024269 Lotus japonicus HOM05D007039 ORTHO05D008886 2.1e-116 422.5 237 85.7
arahy.Tifrunner.gnm1.ann1.2NV5LW Arachis hypogaea HOM05D007039 ORTHO05D008886 2.9e-113 412.1 241 81.3
arahy.Tifrunner.gnm1.ann1.XC1RGZ Arachis hypogaea HOM05D007039 ORTHO05D008886 6.4e-113 411.0 241 81.3
Lalb_Chr06g0166411 Lupinus albus HOM05D007039 ORTHO05D008886 1.0e-110 403.7 241 80.5
TWI63G1767 Tripterygium wilfordii HOM05D007039 ORTHO05D008886 1.6e-108 396.4 240 79.2
PGSC0003DMG400016998 Solanum tuberosum HOM05D007039 ORTHO05D008886 5.4e-104 381.3 240 75.4
Lj2A32T31 Lonicera japonica HOM05D007039 ORTHO05D008886 7.1e-104 380.9 242 77.3
MD02G1261300 Malus domestica HOM05D007039 ORTHO05D008886 9.2e-104 380.6 241 76.3
Rhsim09G0142000 Rhododendron simsii HOM05D007039 ORTHO05D008886 9.2e-104 380.6 241 76.8
Solyc04g009700.3 Solanum lycopersicum HOM05D007039 ORTHO05D008886 2.1e-103 379.4 240 74.6
Oeu025598.1 Olea europaea HOM05D007039 ORTHO05D008886 4.6e-103 378.3 241 75.9
Prupe.2G067300 Prunus persica HOM05D007039 ORTHO05D008886 4.6e-103 378.3 241 76.3
HanXRQChr08g0217501 Helianthus annuus HOM05D007039 ORTHO05D008886 6.0e-103 377.9 240 75.4
Sopen04g004820 Solanum pennellii HOM05D007039 ORTHO05D008886 6.0e-103 377.9 240 74.6
RcHm_v2.0_Chr1g0331721 Rosa chinensis HOM05D007039 ORTHO05D008886 1.0e-102 377.1 241 75.9
SalBow6G1307 Salvia bowleyana HOM05D007039 ORTHO05D008886 1.7e-102 376.3 241 75.1
GSVIVG01001001001 Vitis vinifera HOM05D007039 ORTHO05D008886 3.0e-102 375.6 241 73.9
Atru.chr12.1023 Acer truncatum HOM05D007039 ORTHO05D008886 5.1e-102 374.8 241 74.7
Cc02_g09650 Coffea canephora HOM05D007039 ORTHO05D008886 6.6e-102 374.4 241 75.9
CAN.G186.55 Capsicum annuum HOM05D007039 ORTHO05D008886 1.1e-101 373.6 240 74.2
Eucgr.J00258 Eucalyptus grandis HOM05D007039 ORTHO05D008886 1.5e-101 373.2 241 73.9
CiPaw.14G032800 Carya illinoinensis HOM05D007039 ORTHO05D008886 2.5e-101 372.5 241 74.7
Lsat_1_v5_gn_8_24101 Lactuca sativa HOM05D007039 ORTHO05D008886 3.3e-101 372.1 240 73.3
CANSAT56G1368 Cannabis sativa HOM05D007039 ORTHO05D008886 9.5e-101 370.5 237 75.1
Manes.07G087400 Manihot esculenta HOM05D007039 ORTHO05D008886 9.5e-101 370.5 239 74.5
Cfa011268 Carpinus fangiana HOM05D007039 ORTHO05D008886 1.2e-100 370.2 241 73.0
FAN03G1588 Fragaria x ananassa HOM05D007039 ORTHO05D008886 1.2e-100 370.2 241 73.4
FAN06G3803 Fragaria x ananassa HOM05D007039 ORTHO05D008886 4.0e-99 365.2 241 73.0
Dinv11837 Davidia involucrata HOM05D007039 ORTHO05D008886 5.2e-99 364.8 241 74.3
Ciclev10016452m.g Citrus clementina HOM05D007039 ORTHO05D008886 6.8e-99 364.4 241 73.0
FAN01G2006 Fragaria x ananassa HOM05D007039 ORTHO05D008886 1.5e-98 363.2 241 73.4
Migut.F00878 Erythranthe guttata HOM05D007039 ORTHO05D008886 5.8e-98 361.3 241 72.2
CSS0047124 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 1.3e-97 360.1 241 73.0
Oeu036842.1 Olea europaea HOM05D007039 ORTHO05D008886 1.3e-97 360.1 241 72.6
vmacro10308 Vaccinium macrocarpon HOM05D007039 ORTHO05D008886 4.9e-97 358.2 287 63.4
SGA_v2.0_scaffold62G21336 Striga asiatica HOM05D007039 ORTHO05D008886 6.4e-97 357.8 241 72.2
CSS0023700 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 1.2e-95 353.6 241 71.8
QL04p044873 Quercus lobata HOM05D007039 ORTHO05D008886 1.2e-95 353.6 241 71.4
Thecc.07G140700 Theobroma cacao HOM05D007039 ORTHO05D008886 1.6e-95 353.2 241 68.9
Potri.010G238700 Populus trichocarpa HOM05D007039 ORTHO05D008886 2.1e-95 352.8 240 70.8
FAN10G1571 Fragaria x ananassa HOM05D007039 ORTHO05D008886 1.0e-94 350.5 255 68.6
MD07G1059500 Malus domestica HOM05D007039 ORTHO05D008886 3.0e-94 349.0 241 71.0
Hund22275 Selenicereus undatus HOM05D007039 ORTHO05D008886 5.1e-94 348.2 238 70.6
THA.LOC104801579 Tarenaya hassleriana HOM05D007039 ORTHO05D008886 5.1e-94 348.2 240 69.2
Gohir.A06G173100 Gossypium hirsutum HOM05D007039 ORTHO05D008886 6.6e-94 347.8 241 68.9
Sabra10G0186900 Salix brachista HOM05D007039 ORTHO05D008886 6.6e-94 347.8 241 69.3
Nitab4.5_0003927g0060 Nicotiana tabacum HOM05D007039 ORTHO05D008886 8.6e-94 347.4 241 70.5
Gorai.010G214000 Gossypium raimondii HOM05D007039 ORTHO05D008886 1.5e-93 346.7 241 68.9
Gorai.010G214100 Gossypium raimondii HOM05D007039 ORTHO05D008886 2.5e-93 345.9 241 68.9
TAR623G0720 Trochodendron aralioides HOM05D007039 ORTHO05D008886 3.3e-93 345.5 240 69.6
Gohir.D06G183000 Gossypium hirsutum HOM05D007039 ORTHO05D008886 4.3e-93 345.1 241 68.9
Gohir.D06G183100 Gossypium hirsutum HOM05D007039 ORTHO05D008886 7.3e-93 344.4 241 68.9
Gohir.D06G182700 Gossypium hirsutum HOM05D007039 ORTHO05D008886 1.2e-92 343.6 241 68.5
Potri.008G020500 Populus trichocarpa HOM05D007039 ORTHO05D008886 2.1e-92 342.8 239 68.6
Sc20g0001160 Simmondsia chinensis HOM05D007039 ORTHO05D008886 2.1e-92 342.8 237 69.2
COL.COLO4_17444 Corchorus olitorius HOM05D007039 ORTHO05D008886 2.8e-92 342.4 241 70.5
Duzib106G1061 Durio zibethinus HOM05D007039 ORTHO05D008886 8.1e-92 340.9 241 68.0
Glyma.10G279000 Glycine max HOM05D007039 ORTHO05D008886 1.1e-91 340.5 239 73.6
unitig_748.g8774 Utricularia gibba HOM05D007039 ORTHO05D008886 2.4e-91 339.3 241 68.5
Peaxi162Scf00195g01020 Petunia axillaris HOM05D007039 ORTHO05D008886 4.0e-91 338.6 241 70.1
AUR62041513 Chenopodium quinoa HOM05D007039 ORTHO05D008886 4.4e-90 335.1 241 66.0
Nn6g34917 Nelumbo nucifera HOM05D007039 ORTHO05D008886 9.9e-90 334.0 240 67.9
Ah.06g186600 Amaranthus hybridus HOM05D007039 ORTHO05D008886 1.7e-89 333.2 241 68.5
PSO384G1372 Papaver somniferum HOM05D007039 ORTHO05D008886 3.8e-89 332.0 235 67.7
PSO339G1176 Papaver somniferum HOM05D007039 ORTHO05D008886 1.4e-88 330.1 235 67.2
Sed0014501 Sechium edule HOM05D007039 ORTHO05D008886 3.5e-87 325.5 241 65.1
AUR62042080 Chenopodium quinoa HOM05D007039 ORTHO05D008886 1.0e-86 323.9 224 67.0
MELO3C019894.2 Cucumis melo HOM05D007039 ORTHO05D008886 2.3e-86 322.8 241 65.6
Aqoxy2G01207 Aquilegia oxysepala HOM05D007039 ORTHO05D008886 8.7e-86 320.9 239 65.3
EL10Ac4g08687 Beta vulgaris HOM05D007039 ORTHO05D008886 7.3e-85 317.8 237 64.1
HPP92_006806 Vanilla planifolia HOM05D007039 ORTHO05D008886 1.5e-82 310.1 235 62.1
Zm00001eb366890 Zea mays HOM05D007039 ORTHO05D008886 2.0e-82 309.7 240 63.3
ClCG08G008260 Citrullus lanatus HOM05D007039 ORTHO05D008886 3.4e-82 308.9 276 57.2
Zm00001eb147230 Zea mays HOM05D007039 ORTHO05D008886 1.3e-81 307.0 236 64.0
Os01g0859400 Oryza sativa ssp. japonica HOM05D007039 ORTHO05D008886 4.9e-81 305.1 241 61.4
TAR633G1803 Trochodendron aralioides HOM05D007039 ORTHO05D008886 5.4e-80 301.6 237 60.8
Dinv09617 Davidia involucrata HOM05D007039 ORTHO05D008886 1.6e-79 300.1 241 65.1
Cpa.g.sc56.15 Carica papaya HOM05D007039 ORTHO05D008886 1.5e-77 293.5 184 71.2
ECA233G2799 Erigeron canadensis HOM05D007039 ORTHO05D008886 2.6e-74 282.7 184 70.7
PGSC0003DMG400023289 Solanum tuberosum HOM05D007039 ORTHO05D008886 3.2e-72 275.8 183 71.0
FvH4_7g05130 Fragaria vesca HOM05D007039 ORTHO05D008886 3.3e-69 265.8 183 70.5
HPP92_009745 Vanilla planifolia HOM05D007039 ORTHO05D008886 1.3e-68 263.8 233 53.6
Oeu036841.1 Olea europaea HOM05D007039 ORTHO05D008886 2.1e-68 263.1 183 69.9
HPP92_009768 Vanilla planifolia HOM05D007039 ORTHO05D008886 2.1e-68 263.1 233 53.6
PGR142G0235 Punica granatum HOM05D007039 ORTHO05D008886 8.1e-68 261.2 182 69.8
Eucgr.J00257 Eucalyptus grandis HOM05D007039 ORTHO05D008886 9.0e-67 257.7 183 68.3
MSTRG.9060 Avicennia marina HOM05D007039 ORTHO05D008886 4.2e-64 248.8 183 66.1
Mapoly0010s0050 Marchantia polymorpha HOM05D007039 ORTHO05D008886 4.6e-63 245.4 229 50.7
Os12g0152800 Oryza sativa ssp. japonica HOM05D007039 ORTHO05D008886 1.0e-62 244.2 239 48.5
Zm00001eb092690 Zea mays HOM05D007039 ORTHO05D008886 8.7e-62 241.1 238 48.7
CsaV3_6G004220 Cucumis sativus L. HOM05D007039 ORTHO05D008886 1.4e-59 233.8 181 62.4
CSS0008887 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 1.3e-57 227.3 188 62.2
SMO367G0592 Selaginella moellendorffii HOM05D007039 ORTHO05D008886 1.7e-57 226.9 230 49.1
Pp3c15_5790 Physcomitrium patens HOM05D007039 ORTHO05D008886 3.2e-56 222.6 232 46.6
AagrBONN_evm.TU.Sc2ySwM_362.1562 Anthoceros agrestis HOM05D007039 ORTHO05D008886 5.1e-54 215.3 239 43.9
CBR_g32363 Chara braunii HOM05D007039 ORTHO05D008886 1.5e-53 213.8 207 49.8
CSS0041399 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 7.4e-53 211.5 179 62.0
AagrBONN_evm.TU.Sc2ySwM_228.3073 Anthoceros agrestis HOM05D007039 ORTHO05D008886 9.0e-51 204.5 216 46.3
CDE08G0883 Ceratophyllum demersum HOM05D007039 ORTHO05D008886 1.1e-48 197.6 148 56.1
DCAR_019005 Daucus carota HOM05D007039 ORTHO05D008886 3.7e-44 182.6 110 75.5
Zm00001eb197030 Zea mays HOM05D007039 ORTHO05D008886 3.6e-39 166.0 180 42.8
Nitab4.5_0000691g0070 Nicotiana tabacum HOM05D007039 ORTHO05D008886 1.4e-38 164.1 241 45.2
SMO353G0277 Selaginella moellendorffii HOM05D007039 ORTHO05D008886 1.3e-36 157.5 182 45.1
Cre01.g018100 Chlamydomonas reinhardtii HOM05D007039 ORTHO05D008886 3.8e-33 146.0 211 36.0
MD04G1248500 Malus domestica HOM05D007039 ORTHO05D008886 6.3e-28 128.6 106 63.2
PRCOL_00002076 Prasinoderma coloniale HOM05D007039 ORTHO05D008886 8.0e-23 111.7 245 27.8


User provided reference genes

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