Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_25660_v3 Cicer arietinum L. HOM05D006196 ORTHO05D007758 1.1e-184 649.8 333 100.0
Medtr1g111960 Medicago truncatula HOM05D006196 ORTHO05D007758 2.6e-149 532.3 331 80.4
Psat0s1903g0040 Pisum sativum HOM05D006196 ORTHO05D007758 4.6e-146 521.5 334 80.8
TPR.G2427 Trifolium pratense HOM05D006196 ORTHO05D007758 1.3e-143 513.5 334 80.2
Glyma.20G111300 Glycine max HOM05D006196 ORTHO05D007758 4.0e-142 508.4 335 79.1
Phvul.007G023000 Phaseolus vulgaris HOM05D006196 ORTHO05D007758 9.9e-141 503.8 333 77.5
Lj5g0013601 Lotus japonicus HOM05D006196 ORTHO05D007758 2.4e-139 499.2 335 78.5
Glyma.10G278400 Glycine max HOM05D006196 ORTHO05D007758 3.5e-138 495.4 334 77.5
VMungo0720G0291 Vigna mungo HOM05D006196 ORTHO05D007758 3.0e-137 492.3 333 76.0
arahy.Tifrunner.gnm1.ann1.EL78PJ Arachis hypogaea HOM05D006196 ORTHO05D007758 1.9e-136 489.6 338 74.6
arahy.Tifrunner.gnm1.ann1.N25XM0 Arachis hypogaea HOM05D006196 ORTHO05D007758 1.6e-135 486.5 338 75.1
Lalb_Chr06g0166391 Lupinus albus HOM05D006196 ORTHO05D007758 1.1e-131 473.8 335 74.0
Medtr1g050385 Medicago truncatula HOM05D006196 ORTHO05D007758 7.2e-115 417.9 349 62.5
Lj6g0028083 Lotus japonicus HOM05D006196 ORTHO05D007758 3.6e-114 415.6 340 64.7
TPR.G10627 Trifolium pratense HOM05D006196 ORTHO05D007758 1.1e-112 410.6 351 61.8
Glyma.10G111100 Glycine max HOM05D006196 ORTHO05D007758 2.2e-111 406.4 345 62.6
Psat6g093840 Pisum sativum HOM05D006196 ORTHO05D007758 4.1e-110 402.1 341 61.6
Haze_03294 Corylus avellana HOM05D006196 ORTHO05D007758 1.4e-105 387.1 334 60.8
CSS0023098 Camellia sinensis var. sinensis HOM05D006196 ORTHO05D007758 3.9e-105 385.6 333 59.8
Lalb_Chr01g0010431 Lupinus albus HOM05D006196 ORTHO05D007758 6.7e-105 384.8 376 56.4
Thecc.10G115000 Theobroma cacao HOM05D006196 ORTHO05D007758 2.4e-102 376.3 340 57.4
QL04p046737 Quercus lobata HOM05D006196 ORTHO05D007758 2.2e-100 369.8 357 56.6
Duzib114G0383 Durio zibethinus HOM05D006196 ORTHO05D007758 6.5e-100 368.2 339 56.6
Atru.chr12.1044 Acer truncatum HOM05D006196 ORTHO05D007758 1.1e-99 367.5 333 58.3
Manes.07G086900 Manihot esculenta HOM05D006196 ORTHO05D007758 1.9e-99 366.7 333 55.9
CiPaw.13G040700 Carya illinoinensis HOM05D006196 ORTHO05D007758 5.5e-99 365.2 335 58.2
Rhsim03G0097800 Rhododendron simsii HOM05D006196 ORTHO05D007758 2.1e-98 363.2 348 55.7
Hma1.2p1_0457F.1_g156990 Hydrangea macrophylla HOM05D006196 ORTHO05D007758 6.1e-98 361.7 307 60.6
COL.COLO4_29746 Corchorus olitorius HOM05D006196 ORTHO05D007758 3.9e-97 359.0 340 54.4
TAR623G1022 Trochodendron aralioides HOM05D006196 ORTHO05D007758 3.9e-97 359.0 330 57.3
Actinidia18628 Actinidia chinensis HOM05D006196 ORTHO05D007758 1.3e-95 354.0 333 55.3
Manes.10G062200 Manihot esculenta HOM05D006196 ORTHO05D007758 1.3e-95 354.0 333 54.7
Oeu026604.1 Olea europaea HOM05D006196 ORTHO05D007758 2.2e-95 353.2 337 54.3
CAN.G645.29 Capsicum annuum HOM05D006196 ORTHO05D007758 1.8e-94 350.1 332 53.6
Lj2C33T17 Lonicera japonica HOM05D006196 ORTHO05D007758 2.4e-94 349.7 338 55.0
Nitab4.5_0002586g0080 Nicotiana tabacum HOM05D006196 ORTHO05D007758 2.4e-94 349.7 335 54.3
Gorai.012G020000 Gossypium raimondii HOM05D006196 ORTHO05D007758 1.2e-93 347.4 336 54.8
PGSC0003DMG400023969 Solanum tuberosum HOM05D006196 ORTHO05D007758 3.5e-93 345.9 333 52.3
Nitab4.5_0003590g0020 Nicotiana tabacum HOM05D006196 ORTHO05D007758 4.5e-93 345.5 336 53.9
Gohir.A05G398600 Gossypium hirsutum HOM05D006196 ORTHO05D007758 7.7e-93 344.7 336 54.5
Cpa.g.sc56.1 Carica papaya HOM05D006196 ORTHO05D007758 1.3e-92 344.0 344 53.2
Gohir.D04G017300 Gossypium hirsutum HOM05D006196 ORTHO05D007758 1.7e-92 343.6 336 54.5
Solyc11g006830.2 Solanum lycopersicum HOM05D006196 ORTHO05D007758 1.7e-92 343.6 331 52.3
Sopen11g002750 Solanum pennellii HOM05D006196 ORTHO05D007758 1.7e-92 343.6 331 52.3
CANSAT56G0980 Cannabis sativa HOM05D006196 ORTHO05D007758 2.9e-92 342.8 356 52.8
ClCG08G008290 Citrullus lanatus HOM05D006196 ORTHO05D007758 4.2e-91 339.0 343 55.4
Sed0008038 Sechium edule HOM05D006196 ORTHO05D007758 3.6e-90 335.9 342 53.5
Potri.010G239700 Populus trichocarpa HOM05D006196 ORTHO05D007758 1.4e-89 334.0 336 51.5
TWI38G1704 Tripterygium wilfordii HOM05D006196 ORTHO05D007758 4.0e-89 332.4 339 54.6
Sabra10G0187700 Salix brachista HOM05D006196 ORTHO05D007758 2.6e-88 329.7 336 51.8
MELO3C019897.2 Cucumis melo HOM05D006196 ORTHO05D007758 3.4e-88 329.3 341 53.1
Sabra08G0013000 Salix brachista HOM05D006196 ORTHO05D007758 4.4e-88 328.9 329 52.3
CsaV3_6G004260 Cucumis sativus L. HOM05D006196 ORTHO05D007758 5.7e-88 328.6 341 53.7
Sed0021157 Sechium edule HOM05D006196 ORTHO05D007758 1.7e-87 327.0 319 55.2
MSTRG.27569 Avicennia marina HOM05D006196 ORTHO05D007758 2.2e-87 326.6 336 49.4
Potri.008G019700 Populus trichocarpa HOM05D006196 ORTHO05D007758 6.3e-87 325.1 331 50.5
MSTRG.9056 Avicennia marina HOM05D006196 ORTHO05D007758 3.1e-86 322.8 338 50.3
Lsat_1_v5_gn_2_104380 Lactuca sativa HOM05D006196 ORTHO05D007758 3.1e-86 322.8 314 53.5
GSVIVG01010724001 Vitis vinifera HOM05D006196 ORTHO05D007758 7.0e-86 321.6 277 59.9
CDE08G0664 Ceratophyllum demersum HOM05D006196 ORTHO05D007758 2.7e-85 319.7 311 51.8
Cc02_g09600 Coffea canephora HOM05D006196 ORTHO05D007758 4.5e-85 318.9 342 49.1
SGA_v2.0_scaffold13G06435 Striga asiatica HOM05D006196 ORTHO05D007758 7.7e-85 318.2 383 47.0
Migut.F00871 Erythranthe guttata HOM05D006196 ORTHO05D007758 2.2e-84 316.6 336 48.5
MBI01_g16486_MAGBIO Magnolia biondii HOM05D006196 ORTHO05D007758 3.8e-84 315.8 336 48.5
ECA238G1493 Erigeron canadensis HOM05D006196 ORTHO05D007758 8.5e-84 314.7 308 52.6
SalBow6G5730 Salvia bowleyana HOM05D006196 ORTHO05D007758 3.2e-83 312.8 339 49.6
HanXRQChr11g0342081 Helianthus annuus HOM05D006196 ORTHO05D007758 5.5e-83 312.0 306 53.6
THA.LOC104811342 Tarenaya hassleriana HOM05D006196 ORTHO05D007758 7.2e-83 311.6 322 50.6
AT3G54290 Arabidopsis thaliana HOM05D006196 ORTHO05D007758 1.6e-82 310.5 357 47.3
HanXRQChr07g0194291 Helianthus annuus HOM05D006196 ORTHO05D007758 2.1e-82 310.1 308 52.9
unitig_37.g12349 Utricularia gibba HOM05D006196 ORTHO05D007758 2.3e-81 306.6 337 48.7
Prupe.2G067800 Prunus persica HOM05D006196 ORTHO05D007758 4.0e-81 305.8 355 51.8
Thhalv10010495m.g Eutrema salsugineum HOM05D006196 ORTHO05D007758 2.0e-80 303.5 364 46.2
AL5G35330 Arabidopsis lyrata HOM05D006196 ORTHO05D007758 5.7e-80 302.0 360 47.2
Peaxi162Scf00173g00018 Petunia axillaris HOM05D006196 ORTHO05D007758 7.5e-80 301.6 288 55.6
Aa31sc392G30 Aethionema arabicum HOM05D006196 ORTHO05D007758 9.8e-80 301.2 311 49.5
BcaC02g09075 Brassica carinata HOM05D006196 ORTHO05D007758 9.8e-80 301.2 320 49.1
A04p05460 Brassica napus HOM05D006196 ORTHO05D007758 1.3e-79 300.8 321 50.2
CARHR164220 Cardamine hirsuta HOM05D006196 ORTHO05D007758 1.3e-79 300.8 305 50.5
BraA04t16248Z Brassica rapa HOM05D006196 ORTHO05D007758 4.8e-79 298.9 319 49.2
Carub.0005s2088 Capsella rubella HOM05D006196 ORTHO05D007758 1.1e-78 297.7 358 46.4
Sp5g08100 Schrenkiella parvula HOM05D006196 ORTHO05D007758 1.1e-78 297.7 304 50.3
BcaB02g08483 Brassica carinata HOM05D006196 ORTHO05D007758 4.1e-78 295.8 322 49.1
PSO339G1429 Papaver somniferum HOM05D006196 ORTHO05D007758 4.1e-78 295.8 349 45.8
PSO801G0620 Papaver somniferum HOM05D006196 ORTHO05D007758 4.1e-78 295.8 346 45.4
DCAR_019003 Daucus carota HOM05D006196 ORTHO05D007758 1.6e-77 293.9 339 47.5
Dinv10931 Davidia involucrata HOM05D006196 ORTHO05D007758 1.6e-77 293.9 255 60.0
MD07G1059000 Malus domestica HOM05D006196 ORTHO05D007758 1.7e-76 290.4 355 49.0
BraA09t40190Z Brassica rapa HOM05D006196 ORTHO05D007758 1.1e-75 287.7 303 48.5
A09p47290 Brassica napus HOM05D006196 ORTHO05D007758 1.5e-75 287.3 303 48.5
Hund06787 Selenicereus undatus HOM05D006196 ORTHO05D007758 1.5e-75 287.3 310 49.7
BolC8t50558H Brassica oleracea HOM05D006196 ORTHO05D007758 1.9e-75 287.0 290 50.3
C08p29520 Brassica napus HOM05D006196 ORTHO05D007758 5.5e-75 285.4 290 50.0
Ah.13g074540 Amaranthus hybridus HOM05D006196 ORTHO05D007758 9.5e-75 284.6 351 44.7
Ah.06g186650 Amaranthus hybridus HOM05D006196 ORTHO05D007758 8.0e-74 281.6 344 44.5
MD07G1059300 Malus domestica HOM05D006196 ORTHO05D007758 1.0e-73 281.2 361 48.8
Sc09g0005310 Simmondsia chinensis HOM05D006196 ORTHO05D007758 3.0e-73 279.6 325 45.2
C04p38140 Brassica napus HOM05D006196 ORTHO05D007758 4.0e-73 279.3 319 47.3
Ciclev10015947m.g Citrus clementina HOM05D006196 ORTHO05D007758 4.5e-69 265.8 340 47.1
ATR0820G221 Amborella trichopoda HOM05D006196 ORTHO05D007758 3.5e-61 239.6 219 52.1
Ca_20266_v3 Cicer arietinum L. HOM05D006196 ORTHO05D007758 1.5e-56 224.2 209 56.5
BcaB01g00209 Brassica carinata HOM05D006196 ORTHO05D007758 1.3e-55 221.1 233 49.4
BolC4t25389H Brassica oleracea HOM05D006196 ORTHO05D007758 8.1e-50 201.8 188 51.1
unitig_46.g18638 Utricularia gibba HOM05D006196 ORTHO05D007758 3.2e-46 189.9 177 53.1
HPP92_026086 Vanilla planifolia HOM05D006196 ORTHO05D007758 7.1e-46 188.7 325 36.0
SMO146G0289 Selaginella moellendorffii HOM05D006196 ORTHO05D007758 1.2e-45 188.0 241 39.8
HPP92_025137 Vanilla planifolia HOM05D006196 ORTHO05D007758 1.7e-44 184.1 326 36.5
Os01g0861700 Oryza sativa ssp. japonica HOM05D006196 ORTHO05D007758 8.9e-41 171.8 330 35.8
Zm00001eb147080 Zea mays HOM05D006196 ORTHO05D007758 2.6e-40 170.2 346 34.4
arahy.Tifrunner.gnm1.ann1.5GK804 Arachis hypogaea HOM05D006196 ORTHO05D007758 1.6e-37 161.0 121 68.6
Mapoly0016s0155 Marchantia polymorpha HOM05D006196 ORTHO05D007758 4.6e-37 159.5 227 37.4
Pp3c13_16840 Physcomitrium patens HOM05D006196 ORTHO05D007758 1.9e-35 154.1 217 40.1
Pp3c12_15440 Physcomitrium patens HOM05D006196 ORTHO05D007758 1.4e-33 147.9 222 36.9
Pp3c3_21020 Physcomitrium patens HOM05D006196 ORTHO05D007758 5.3e-33 146.0 201 39.8
arahy.Tifrunner.gnm1.ann1.K1D1LI Arachis hypogaea HOM05D006196 ORTHO05D007758 1.2e-32 144.8 117 66.7
Pp3c16_23090 Physcomitrium patens HOM05D006196 ORTHO05D007758 4.4e-32 142.9 208 37.5
AagrBONN_evm.TU.Sc2ySwM_228.4853 Anthoceros agrestis HOM05D006196 ORTHO05D007758 5.8e-32 142.5 219 36.1
Pp3c6_4750 Physcomitrium patens HOM05D006196 ORTHO05D007758 9.9e-32 141.7 245 33.5
Pp3c16_23080 Physcomitrium patens HOM05D006196 ORTHO05D007758 1.7e-31 141.0 206 38.8
Pp3c25_11830 Physcomitrium patens HOM05D006196 ORTHO05D007758 3.8e-31 139.8 206 39.3
SMO198G0051 Selaginella moellendorffii HOM05D006196 ORTHO05D007758 6.2e-26 122.5 230 34.8
Pp3c25_11860 Physcomitrium patens HOM05D006196 ORTHO05D007758 4.0e-25 119.8 150 42.0
CBR_g31351 Chara braunii HOM05D006196 ORTHO05D007758 3.8e-23 113.2 201 34.3
Actinidia02755 Actinidia chinensis HOM05D006196 ORTHO05D007758 3.3e-19 100.1 82 62.2
Zm00001eb366830 Zea mays HOM05D006196 ORTHO05D007758 2.2e-15 87.4 129 40.3
unitig_46.g18639 Utricularia gibba HOM05D006196 ORTHO05D007758 1.5e-11 74.7 103 41.7


User provided reference genes

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