Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_25653_v3 Cicer arietinum L. HOM05D007506 ORTHO05D008409 5.1e-33 144.1 85 100.0
Medtr1g111840 Medicago truncatula HOM05D007506 ORTHO05D008409 4.6e-26 120.9 86 79.1
Lj5g0016646 Lotus japonicus HOM05D007506 ORTHO05D008409 2.0e-21 105.5 80 78.8
Phvul.007G023500 Phaseolus vulgaris HOM05D007506 ORTHO05D008409 7.6e-21 103.6 84 69.0
Glyma.10G277900 Glycine max HOM05D007506 ORTHO05D008409 1.3e-20 102.8 86 67.4
VMungo0720G0153 Vigna mungo HOM05D007506 ORTHO05D008409 4.9e-20 100.9 85 68.2
Psat6g238400 Pisum sativum HOM05D007506 ORTHO05D008409 8.4e-20 100.1 56 91.1
TPR.G2499 Trifolium pratense HOM05D007506 ORTHO05D008409 7.9e-18 93.6 73 69.9
Glyma.20G110900 Glycine max HOM05D007506 ORTHO05D008409 2.3e-17 92.0 89 64.0
Lalb_Chr02g0146201 Lupinus albus HOM05D007506 ORTHO05D008409 1.5e-16 89.4 88 70.5
arahy.Tifrunner.gnm1.ann1.DEP6R1 Arachis hypogaea HOM05D007506 ORTHO05D008409 1.9e-16 89.0 57 84.2
arahy.Tifrunner.gnm1.ann1.MBF964 Arachis hypogaea HOM05D007506 ORTHO05D008409 1.9e-16 89.0 57 84.2
Lalb_Chr06g0166331 Lupinus albus HOM05D007506 ORTHO05D008409 7.4e-16 87.0 79 69.6
PGR142G2547 Punica granatum HOM05D007506 ORTHO05D008409 3.4e-13 78.2 85 62.4
RcHm_v2.0_Chr1g0331731 Rosa chinensis HOM05D007506 ORTHO05D008409 6.5e-12 73.9 86 57.0
arahy.Tifrunner.gnm1.ann1.KXIJ9T Arachis hypogaea HOM05D007506 ORTHO05D008409 1.4e-11 72.8 49 73.5
Potri.010G240401 Populus trichocarpa HOM05D007506 ORTHO05D008409 1.4e-11 72.8 87 65.5
Manes.07G086800 Manihot esculenta HOM05D007506 ORTHO05D008409 1.6e-10 69.3 59 69.5
THA.LOC104816468 Tarenaya hassleriana HOM05D012863 ORTHO05D008409 3.6e-10 68.2 92 47.8
Ciclev10017346m.g Citrus clementina HOM05D007506 ORTHO05D008409 1.0e-09 66.6 57 71.9
CiPaw.14G033800 Carya illinoinensis HOM05D007506 ORTHO05D008409 1.4e-09 66.2 87 58.6
Cc02_g09560 Coffea canephora HOM05D007506 ORTHO05D008409 1.8e-09 65.9 64 60.9
Atru.chr12.1049 Acer truncatum HOM05D007506 ORTHO05D008409 3.0e-09 65.1 57 70.2
Duzib106G0675 Durio zibethinus HOM05D007506 ORTHO05D008409 3.9e-09 64.7 62 66.1
Potri.008G016801 Populus trichocarpa HOM05D007506 ORTHO05D008409 3.9e-09 64.7 87 59.8
QL04p046828 Quercus lobata HOM05D007506 ORTHO05D008409 3.9e-09 64.7 86 55.8
Thecc.10G114000 Theobroma cacao HOM05D007506 ORTHO05D008409 1.9e-08 62.4 62 67.7
Haze_03301 Corylus avellana HOM05D007506 ORTHO05D008409 2.5e-08 62.0 66 62.1
Nitab4.5_0002586g0040 Nicotiana tabacum HOM05D007506 ORTHO05D008409 2.5e-08 62.0 67 55.2
FAN03G1835 Fragaria x ananassa HOM05D007506 ORTHO05D008409 3.3e-08 61.6 84 53.6
arahy.Tifrunner.gnm1.ann1.X5G790 Arachis hypogaea HOM05D007506 ORTHO05D008409 7.4e-08 60.5 42 73.8
THA.LOC109117254 Tarenaya hassleriana HOM05D012863 ORTHO05D008409 7.4e-08 60.5 89 44.9
Cpa.g.sc54.9 Carica papaya HOM05D007506 ORTHO05D008409 9.7e-08 60.1 53 64.2
FvH4_7g05151 Fragaria vesca HOM05D007506 ORTHO05D008409 1.3e-07 59.7 83 53.0
Hund06790 Selenicereus undatus HOM05D007506 ORTHO05D008409 1.7e-07 59.3 85 47.1
Migut.F00865 Erythranthe guttata HOM05D007506 ORTHO05D008409 2.2e-07 58.9 62 58.1
arahy.Tifrunner.gnm1.ann1.C6ZGU5 Arachis hypogaea HOM05D007506 ORTHO05D008409 2.8e-07 58.5 38 76.3
MD07G1070900 Malus domestica HOM05D007506 ORTHO05D008409 2.8e-07 58.5 77 58.4
Peaxi162Scf00519g00621 Petunia axillaris HOM05D007506 ORTHO05D008409 2.8e-07 58.5 55 56.4
TWI38G1985 Tripterygium wilfordii HOM05D007506 ORTHO05D008409 2.8e-07 58.5 53 64.2
Dinv12843 Davidia involucrata HOM05D007506 ORTHO05D008409 6.3e-07 57.4 62 59.7
Sabra08G0010500 Salix brachista HOM05D007506 ORTHO05D008409 1.1e-06 56.6 64 59.4
EL10Ac4g08692 Beta vulgaris HOM05D007506 ORTHO05D008409 1.4e-06 56.2 66 57.6
AUR62042085 Chenopodium quinoa HOM05D007506 ORTHO05D008409 1.4e-06 56.2 64 60.9
Aqoxy7G00782 Aquilegia oxysepala HOM05D007506 ORTHO05D008409 1.8e-06 55.8 59 57.6
Manes.10G062500 Manihot esculenta HOM05D007506 ORTHO05D008409 1.8e-06 55.8 82 56.1
MBI17_g08330_MAGBIO Magnolia biondii HOM05D007506 ORTHO05D008409 2.4e-06 55.5 61 59.0
arahy.Tifrunner.gnm1.ann1.HD4K12 Arachis hypogaea HOM05D000602 ORTHO05D085448 4.1e-06 54.7 33 78.8
CSS0050385 Camellia sinensis var. sinensis HOM05D007506 ORTHO05D008409 4.1e-06 54.7 55 61.8
CANSAT56G4328 Cannabis sativa HOM05D007506 ORTHO05D008409 4.1e-06 54.7 83 53.0
HanXRQChr12g0368271 Helianthus annuus HOM05D021830 ORTHO05D008409 4.1e-06 54.7 57 52.6
Sc20g0001140 Simmondsia chinensis HOM05D007506 ORTHO05D008409 5.3e-06 54.3 87 51.7
FAN05G5073 Fragaria x ananassa HOM05D007506 ORTHO05D008409 6.9e-06 53.9 79 51.9
CsaV3_6G004310 Cucumis sativus L. HOM05D007506 ORTHO05D008409 9.1e-06 53.5 55 61.8


User provided reference genes

Program Settings