Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_25628_v3 Cicer arietinum L. HOM05D004487 ORTHO05D005483 8.6e-134 480.3 245 100.0
Ca_23004_v3 Cicer arietinum L. HOM05D004487 ORTHO05D005483 3.2e-120 435.3 233 94.4
TPR.G33715 Trifolium pratense HOM05D004487 ORTHO05D005483 8.2e-92 340.9 233 76.0
Lj3g0008934 Lotus japonicus HOM05D004487 ORTHO05D005483 3.7e-84 315.5 238 72.3
Lalb_Chr11g0075201 Lupinus albus HOM05D004487 ORTHO05D005483 1.1e-77 293.9 235 68.5
TPR.G36682 Trifolium pratense HOM05D005330 ORTHO05D006489 2.2e-73 279.6 236 65.7
Glyma.15G199500 Glycine max HOM05D004487 ORTHO05D005483 5.5e-72 275.0 235 66.8
Psat2g176760 Pisum sativum HOM05D004487 ORTHO05D005483 7.2e-72 274.6 232 64.2
Phvul.009G211400 Phaseolus vulgaris HOM05D004487 ORTHO05D005483 2.1e-71 273.1 233 65.2
arahy.Tifrunner.gnm1.ann1.0Q3DRY Arachis hypogaea HOM05D004487 ORTHO05D005483 2.6e-69 266.2 221 66.1
arahy.Tifrunner.gnm1.ann1.NRP8RH Arachis hypogaea HOM05D004487 ORTHO05D005483 1.3e-68 263.8 219 66.2
arahy.Tifrunner.gnm1.ann1.Z7G166 Arachis hypogaea HOM05D004487 ORTHO05D005483 2.8e-68 262.7 220 65.9
arahy.Tifrunner.gnm1.ann1.10QJ8K Arachis hypogaea HOM05D004487 ORTHO05D005483 8.2e-68 261.2 219 65.8
Glyma.09G092600 Glycine max HOM05D004487 ORTHO05D005483 3.5e-66 255.8 235 64.3
arahy.Tifrunner.gnm1.ann1.S1NDRU Arachis hypogaea HOM05D004487 ORTHO05D005483 1.5e-64 250.4 221 63.8
arahy.Tifrunner.gnm1.ann1.7417N6 Arachis hypogaea HOM05D004487 ORTHO05D005483 2.5e-64 249.6 220 62.3
QL06p033465 Quercus lobata HOM05D004487 ORTHO05D005483 3.2e-64 249.2 234 58.1
arahy.Tifrunner.gnm1.ann1.Y72RXW Arachis hypogaea HOM05D004487 ORTHO05D005483 9.8e-61 237.7 221 62.4
VMungo1309G0247 Vigna mungo HOM05D004487 ORTHO05D005483 9.1e-59 231.1 233 56.7
arahy.Tifrunner.gnm1.ann1.32WU9K Arachis hypogaea HOM05D004487 ORTHO05D005483 4.5e-58 228.8 198 63.1
CiPaw.04G093900 Carya illinoinensis HOM05D004487 ORTHO05D005483 7.7e-58 228.0 241 54.8
Haze_05964 Corylus avellana HOM05D004487 ORTHO05D005483 2.9e-57 226.1 265 51.3
MD01G1016500 Malus domestica HOM05D004487 ORTHO05D005483 3.8e-57 225.7 241 54.4
GSVIVG01022203001 Vitis vinifera HOM05D004487 ORTHO05D005483 5.0e-57 225.3 240 52.9
vmacro21317 Vaccinium macrocarpon HOM05D004487 ORTHO05D005483 2.5e-56 223.0 235 53.2
Rhsim05G0180000 Rhododendron simsii HOM05D004487 ORTHO05D005483 5.5e-56 221.9 240 50.0
MD15G1334800 Malus domestica HOM05D004487 ORTHO05D005483 9.5e-56 221.1 241 53.5
CANSAT01G2370 Cannabis sativa HOM05D004487 ORTHO05D005483 1.2e-55 220.7 241 53.1
Manes.12G140400 Manihot esculenta HOM05D004487 ORTHO05D005483 6.1e-55 218.4 241 52.7
Nn8g40276 Nelumbo nucifera HOM05D004487 ORTHO05D005483 1.4e-54 217.2 215 53.5
CAN.G861.28 Capsicum annuum HOM05D004487 ORTHO05D005483 8.8e-54 214.5 238 50.4
Nn2g14563 Nelumbo nucifera HOM05D004487 ORTHO05D005483 1.2e-53 214.2 240 50.8
vmacro18624 Vaccinium macrocarpon HOM05D004487 ORTHO05D005483 3.4e-53 212.6 233 50.2
Peaxi162Scf00171g00006 Petunia axillaris HOM05D004487 ORTHO05D005483 4.4e-53 212.2 251 50.2
Potri.007G085100 Populus trichocarpa HOM05D004487 ORTHO05D005483 5.7e-53 211.8 235 52.8
TAR625G1215 Trochodendron aralioides HOM05D004487 ORTHO05D005483 5.7e-53 211.8 242 49.2
arahy.Tifrunner.gnm1.ann1.L7ETT7 Arachis hypogaea HOM05D004487 ORTHO05D005483 7.5e-53 211.5 177 63.8
CSS0025780 Camellia sinensis var. sinensis HOM05D004487 ORTHO05D005483 9.8e-53 211.1 234 50.4
Migut.H01422 Erythranthe guttata HOM05D004487 ORTHO05D005483 2.2e-52 209.9 235 52.8
TWI74G0090 Tripterygium wilfordii HOM05D004487 ORTHO05D005483 6.3e-52 208.4 241 51.5
arahy.Tifrunner.gnm1.ann1.9RVJ5A Arachis hypogaea HOM05D004487 ORTHO05D005483 8.3e-52 208.0 221 55.2
Gohir.A11G053300 Gossypium hirsutum HOM05D004487 ORTHO05D005483 1.1e-51 207.6 241 51.0
Gorai.007G062000 Gossypium raimondii HOM05D004487 ORTHO05D005483 1.1e-51 207.6 241 51.0
Nitab4.5_0007717g0020 Nicotiana tabacum HOM05D004487 ORTHO05D005483 1.1e-51 207.6 235 49.8
Prupe.8G078400 Prunus persica HOM05D004487 ORTHO05D005483 1.1e-51 207.6 228 53.9
Ciclev10026392m.g Citrus clementina HOM05D004487 ORTHO05D005483 1.4e-51 207.2 233 49.4
Thecc.01G110300 Theobroma cacao HOM05D004487 ORTHO05D005483 3.1e-51 206.1 241 48.1
Duzib147G1438 Durio zibethinus HOM05D004487 ORTHO05D005483 4.1e-51 205.7 235 49.4
Nitab4.5_0000477g0120 Nicotiana tabacum HOM05D004487 ORTHO05D005483 5.4e-51 205.3 235 50.2
CsaV3_6G045820 Cucumis sativus L. HOM05D004487 ORTHO05D005483 7.0e-51 204.9 234 49.6
Lsat_1_v5_gn_2_120680 Lactuca sativa HOM05D004487 ORTHO05D005483 7.0e-51 204.9 207 52.2
Sabra07G0070400 Salix brachista HOM05D004487 ORTHO05D005483 9.2e-51 204.5 235 51.1
PGSC0003DMG400015213 Solanum tuberosum HOM05D004487 ORTHO05D005483 9.2e-51 204.5 236 50.4
MELO3C007790.2 Cucumis melo HOM05D004487 ORTHO05D005483 1.6e-50 203.8 234 49.1
Nitab4.5_0001495g0020 Nicotiana tabacum HOM05D004487 ORTHO05D005483 3.5e-50 202.6 235 49.4
Sopen03g029710 Solanum pennellii HOM05D004487 ORTHO05D005483 4.5e-50 202.2 236 50.0
AUR62000713 Chenopodium quinoa HOM05D004487 ORTHO05D005483 5.9e-50 201.8 195 55.4
AUR62005250 Chenopodium quinoa HOM05D004487 ORTHO05D005483 5.9e-50 201.8 227 48.9
Gohir.D11G056800 Gossypium hirsutum HOM05D004487 ORTHO05D005483 7.8e-50 201.4 241 50.6
FAN19G1427 Fragaria x ananassa HOM05D004487 ORTHO05D005483 1.0e-49 201.1 240 49.2
Solyc03g019910.3 Solanum lycopersicum HOM05D004487 ORTHO05D005483 1.0e-49 201.1 236 50.4
ClCG01G019130 Citrullus lanatus HOM05D004487 ORTHO05D005483 1.3e-49 200.7 234 48.7
FvH4_1g21950 Fragaria vesca HOM05D004487 ORTHO05D005483 1.7e-49 200.3 235 50.6
FAN23G0375 Fragaria x ananassa HOM05D004487 ORTHO05D005483 2.3e-49 199.9 238 49.6
Atru.chr3.204 Acer truncatum HOM05D004487 ORTHO05D005483 2.9e-49 199.5 225 49.8
CsaV3_5G036000 Cucumis sativus L. HOM05D004487 ORTHO05D005483 2.9e-49 199.5 239 48.5
Psat4g139920 Pisum sativum HOM05D004487 ORTHO05D005483 6.6e-49 198.4 153 67.3
arahy.Tifrunner.gnm1.ann1.I45DC0 Arachis hypogaea HOM05D004487 ORTHO05D005483 1.5e-48 197.2 220 51.4
Oeu040918.3 Olea europaea HOM05D004487 ORTHO05D005483 1.9e-48 196.8 289 43.3
PGR004G1100 Punica granatum HOM05D004487 ORTHO05D005483 1.9e-48 196.8 240 46.2
MSTRG.14740 Avicennia marina HOM05D004487 ORTHO05D005483 2.5e-48 196.4 236 49.2
COL.COLO4_11036 Corchorus olitorius HOM05D004487 ORTHO05D005483 2.5e-48 196.4 235 47.2
Prupe.6G176600 Prunus persica HOM05D004487 ORTHO05D005483 3.3e-48 196.1 241 50.6
Psat4g139880 Pisum sativum HOM05D004487 ORTHO05D005483 5.6e-48 195.3 153 66.0
FAN28G1272 Fragaria x ananassa HOM05D004487 ORTHO05D005483 7.3e-48 194.9 228 50.0
FAN28G1914 Fragaria x ananassa HOM05D004487 ORTHO05D005483 7.3e-48 194.9 228 50.0
HanXRQChr14g0458831 Helianthus annuus HOM05D004487 ORTHO05D005483 1.6e-47 193.7 236 47.0
Aa31LG6G15640 Aethionema arabicum HOM05D004487 ORTHO05D005483 2.1e-47 193.4 235 50.6
EL10Ac4g09863 Beta vulgaris HOM05D004487 ORTHO05D005483 2.1e-47 193.4 194 52.1
FAN26G2580 Fragaria x ananassa HOM05D004487 ORTHO05D005483 2.8e-47 193.0 240 47.5
RcHm_v2.0_Chr2g0115971 Rosa chinensis HOM05D004487 ORTHO05D005483 2.8e-47 193.0 233 48.9
ECA238G1615 Erigeron canadensis HOM05D004487 ORTHO05D005483 1.4e-46 190.7 234 46.2
Cc02_g15410 Coffea canephora HOM05D004487 ORTHO05D005483 2.3e-46 189.9 237 48.1
FAN19G3081 Fragaria x ananassa HOM05D004487 ORTHO05D005483 2.3e-46 189.9 235 48.5
Lj2A942G27 Lonicera japonica HOM05D004487 ORTHO05D005483 2.3e-46 189.9 201 55.2
Eucgr.I00528 Eucalyptus grandis HOM05D004487 ORTHO05D005483 3.0e-46 189.5 242 45.0
FvH4_1g25670 Fragaria vesca HOM05D004487 ORTHO05D005483 3.0e-46 189.5 234 48.7
MELO3C012399.2 Cucumis melo HOM05D004487 ORTHO05D005483 8.9e-46 188.0 255 45.5
MBI04_g31212_MAGBIO Magnolia biondii HOM05D004487 ORTHO05D005483 3.4e-45 186.0 239 46.4
Potri.005G082500 Populus trichocarpa HOM05D004487 ORTHO05D005483 2.9e-44 183.0 232 48.7
Gohir.1Z049552 Gossypium hirsutum HOM05D004487 ORTHO05D005483 4.9e-44 182.2 178 56.2
SGA_v2.0_scaffold106G30591 Striga asiatica HOM05D004487 ORTHO05D005483 1.4e-43 180.6 211 51.7
Sp7g04740 Schrenkiella parvula HOM05D004487 ORTHO05D005483 2.4e-43 179.9 235 47.2
DCAR_014253 Daucus carota HOM05D004487 ORTHO05D005483 5.4e-43 178.7 215 45.1
Actinidia08329 Actinidia chinensis HOM05D004487 ORTHO05D005483 7.0e-43 178.3 243 42.4
Carub.0007s0150 Capsella rubella HOM05D004487 ORTHO05D005483 2.7e-42 176.4 233 45.9
Thhalv10027902m.g Eutrema salsugineum HOM05D004487 ORTHO05D005483 2.7e-42 176.4 242 46.3
Hma1.2p1_0486F.1_g163280 Hydrangea macrophylla HOM05D004487 ORTHO05D005483 2.7e-42 176.4 207 47.3
TAR626G1474 Trochodendron aralioides HOM05D004487 ORTHO05D005483 4.6e-42 175.6 240 43.8
Aqoxy2G03854 Aquilegia oxysepala HOM05D004487 ORTHO05D005483 1.7e-41 173.7 200 51.5
ClCG05G021300 Citrullus lanatus HOM05D004487 ORTHO05D005483 2.3e-41 173.3 235 45.5
unitig_22.g6757 Utricularia gibba HOM05D004487 ORTHO05D005483 3.0e-41 172.9 229 45.9
AL7G11780 Arabidopsis lyrata HOM05D004487 ORTHO05D005483 1.5e-40 170.6 235 45.5
Ah.04g161200 Amaranthus hybridus HOM05D004487 ORTHO05D005483 1.9e-40 170.2 194 47.4
BolC4t26003H Brassica oleracea HOM05D004487 ORTHO05D005483 5.6e-40 168.7 246 44.7
BcaC02g09572 Brassica carinata HOM05D004487 ORTHO05D005483 2.1e-39 166.8 234 46.2
A04p10610 Brassica napus HOM05D004487 ORTHO05D005483 2.1e-39 166.8 238 45.4
arahy.Tifrunner.gnm1.ann1.4M30AQ Arachis hypogaea HOM05D004487 ORTHO05D005483 2.8e-39 166.4 176 52.8
Nitab4.5_0007222g0010 Nicotiana tabacum HOM05D004487 ORTHO05D005483 3.6e-39 166.0 242 44.6
BraA04t16724Z Brassica rapa HOM05D004487 ORTHO05D005483 8.0e-39 164.9 238 43.7
Sc16g0008840 Simmondsia chinensis HOM05D004487 ORTHO05D005483 8.0e-39 164.9 233 40.8
Lj6g0018564 Lotus japonicus HOM05D004487 ORTHO05D005483 1.8e-38 163.7 104 80.8
C04p44290 Brassica napus HOM05D004487 ORTHO05D005483 2.3e-38 163.3 232 46.1
arahy.Tifrunner.gnm1.ann1.ZIF87W Arachis hypogaea HOM05D004487 ORTHO05D005483 5.2e-38 162.2 201 49.8
THA.LOC104807718 Tarenaya hassleriana HOM05D004487 ORTHO05D005483 3.7e-36 156.0 204 47.5
Lj2A929T16 Lonicera japonica HOM05D004487 ORTHO05D005483 6.4e-36 155.2 244 42.6
Sabra05G0067500 Salix brachista HOM05D004487 ORTHO05D005483 8.3e-36 154.8 237 42.2
AT4G39630 Arabidopsis thaliana HOM05D004487 ORTHO05D005483 1.4e-35 154.1 235 42.1
BcaB06g27071 Brassica carinata HOM05D004487 ORTHO05D005483 2.4e-35 153.3 232 44.8
CARHR215520 Cardamine hirsuta HOM05D004487 ORTHO05D005483 3.2e-35 152.9 238 42.0
Actinidia33369 Actinidia chinensis HOM05D004487 ORTHO05D005483 3.5e-34 149.4 233 39.1
Hma1.2p1_0375F.1_g138570 Hydrangea macrophylla HOM05D004487 ORTHO05D005483 4.3e-32 142.5 119 63.9
Lj4A903G12 Lonicera japonica HOM05D004487 ORTHO05D005483 3.6e-31 139.4 189 47.1
CARHR247100 Cardamine hirsuta HOM05D004487 ORTHO05D005483 1.5e-29 134.0 236 39.0
Dinv13358 Davidia involucrata HOM05D004487 ORTHO05D005483 1.5e-29 134.0 179 45.3
CDE04G3174 Ceratophyllum demersum HOM05D004487 ORTHO05D005483 2.0e-29 133.7 242 37.6
Dinv05687 Davidia involucrata HOM05D004487 ORTHO05D005483 2.0e-29 133.7 179 46.4
HanXRQChr07g0202331 Helianthus annuus HOM05D004487 ORTHO05D005483 4.4e-29 132.5 162 44.4
ATR0210G008 Amborella trichopoda HOM05D004487 ORTHO05D005483 3.2e-27 126.3 242 36.4
Os08g0290400 Oryza sativa ssp. japonica HOM05D004487 ORTHO05D005483 7.1e-27 125.2 232 37.1
Zm00001eb192330 Zea mays HOM05D004487 ORTHO05D005483 1.2e-26 124.4 256 36.3
Sp7g36260 Schrenkiella parvula HOM05D004487 ORTHO05D005483 1.3e-25 120.9 238 38.2
TWI53G0384 Tripterygium wilfordii HOM05D004487 ORTHO05D005483 4.3e-24 115.9 239 34.7
arahy.Tifrunner.gnm1.ann1.3C43J1 Arachis hypogaea HOM05D004487 ORTHO05D005483 5.6e-24 115.5 110 60.0
SHI54251 Sapria himalayana HOM05D004487 ORTHO05D005483 5.6e-24 115.5 240 36.7
arahy.Tifrunner.gnm1.ann1.02EUR6 Arachis hypogaea HOM05D004487 ORTHO05D005483 4.7e-23 112.5 121 52.9
arahy.Tifrunner.gnm1.ann1.RJV3W7 Arachis hypogaea HOM05D004487 ORTHO05D005483 6.2e-23 112.1 110 59.1
HPP92_005242 Vanilla planifolia HOM05D004487 ORTHO05D005483 6.2e-23 112.1 198 34.8
Sed0026038 Sechium edule HOM05D004487 ORTHO05D005483 1.5e-21 107.5 172 41.3
arahy.Tifrunner.gnm1.ann1.PFH739 Arachis hypogaea HOM05D004487 ORTHO05D005483 2.6e-21 106.7 100 57.0
SEGI_02201 Sequoiadendron giganteum HOM05D004487 ORTHO05D005483 3.4e-21 106.3 204 34.3
CSS0002847 Camellia sinensis var. sinensis HOM05D004487 ORTHO05D005483 4.4e-21 105.9 92 64.1
arahy.Tifrunner.gnm1.ann1.PL6VNF Arachis hypogaea HOM05D004487 ORTHO05D005483 7.6e-21 105.1 99 55.6
arahy.Tifrunner.gnm1.ann1.FJ4QJG Arachis hypogaea HOM05D004487 ORTHO05D005483 2.1e-18 97.1 85 63.5
arahy.Tifrunner.gnm1.ann1.94164M Arachis hypogaea HOM05D004487 ORTHO05D005483 2.7e-18 96.7 85 63.5
CDE04G3300 Ceratophyllum demersum HOM05D004487 ORTHO05D005483 1.7e-17 94.0 166 36.7
Lalb_Chr12g0203581 Lupinus albus HOM05D004487 ORTHO05D005483 1.9e-16 90.5 215 36.3
CDE06G2627 Ceratophyllum demersum HOM05D004487 ORTHO05D005483 1.2e-15 87.8 195 31.3
Oeu043116.1 Olea europaea HOM05D004487 ORTHO05D005483 8.1e-15 85.1 163 33.7
FAN26G0673 Fragaria x ananassa HOM05D004487 ORTHO05D005483 9.0e-14 81.6 149 38.3
arahy.Tifrunner.gnm1.ann1.E9WDF1 Arachis hypogaea HOM05D004487 ORTHO05D005483 1.6e-10 70.9 112 43.8
arahy.Tifrunner.gnm1.ann1.X4R883 Arachis hypogaea HOM05D004487 ORTHO05D005483 3.5e-10 69.7 58 56.9
CSS0022213 Camellia sinensis var. sinensis HOM05D004487 ORTHO05D005483 1.7e-09 67.4 53 67.9
CSS0015836 Camellia sinensis var. sinensis HOM05D004487 ORTHO05D005483 2.3e-09 67.0 42 78.6
SGA_v2.0_scaffold83G26423 Striga asiatica HOM05D004487 ORTHO05D005483 1.1e-08 64.7 50 60.0
BcaNung00884 Brassica carinata HOM05D004487 ORTHO05D032747 1.1e-06 58.2 72 47.2


User provided reference genes

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