Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_25619_v3 Cicer arietinum L. HOM05D006034 ORTHO05D007535 4.3e-125 451.4 244 100.0
TPR.G35498 Trifolium pratense HOM05D006034 ORTHO05D007535 2.8e-92 342.4 229 86.5
Lj2g0022455 Lotus japonicus HOM05D006034 ORTHO05D007535 4.5e-90 335.1 234 77.8
Medtr4g036675 Medicago truncatula HOM05D006034 ORTHO05D007535 9.3e-88 327.4 234 79.5
Glyma.07G128800 Glycine max HOM05D006034 ORTHO05D007535 2.0e-82 309.7 229 75.1
VMungo0464G0679 Vigna mungo HOM05D006034 ORTHO05D007535 5.1e-78 295.0 235 70.6
Lalb_Chr24g0393801 Lupinus albus HOM05D006034 ORTHO05D007535 2.5e-77 292.7 219 72.1
Psat1g049600 Pisum sativum HOM05D006034 ORTHO05D007535 2.2e-73 279.6 137 95.6
HanXRQChr12g0354751 Helianthus annuus HOM05D006034 ORTHO05D007535 2.9e-73 279.3 208 63.5
Migut.J00593 Erythranthe guttata HOM05D006034 ORTHO05D007535 3.8e-73 278.9 227 60.4
Potri.006G150200 Populus trichocarpa HOM05D006034 ORTHO05D007535 6.5e-73 278.1 236 62.3
Ciclev10008848m.g Citrus clementina HOM05D006034 ORTHO05D007535 1.4e-70 270.4 197 68.5
Gohir.A06G071400 Gossypium hirsutum HOM05D006034 ORTHO05D007535 3.9e-70 268.9 207 67.1
arahy.Tifrunner.gnm1.ann1.VJWZ4U Arachis hypogaea HOM05D006034 ORTHO05D007535 1.5e-69 266.9 228 65.8
arahy.Tifrunner.gnm1.ann1.JYMB6X Arachis hypogaea HOM05D006034 ORTHO05D007535 2.0e-69 266.5 240 64.2
Gohir.D06G070100 Gossypium hirsutum HOM05D006034 ORTHO05D007535 3.1e-67 259.2 207 66.7
Gorai.010G081700 Gossypium raimondii HOM05D006034 ORTHO05D007535 3.1e-67 259.2 206 67.0
Hma1.2p1_0800F.1_g219990 Hydrangea macrophylla HOM05D006034 ORTHO05D007535 5.3e-67 258.5 177 68.4
Cc06_g11190 Coffea canephora HOM05D006034 ORTHO05D007535 9.1e-67 257.7 148 78.4
Phvul.004G171500 Phaseolus vulgaris HOM05D006034 ORTHO05D007535 9.1e-67 257.7 199 71.4
GSVIVG01015225001 Vitis vinifera HOM05D006034 ORTHO05D007535 9.1e-67 257.7 148 79.1
Aqoxy7G04066 Aquilegia oxysepala HOM05D006034 ORTHO05D007535 1.5e-66 256.9 206 61.7
CsaV3_UNG066530 Cucumis sativus L. HOM05D006034 ORTHO05D007535 1.5e-66 256.9 174 66.7
TAR636G0081 Trochodendron aralioides HOM05D006034 ORTHO05D007535 1.5e-66 256.9 213 63.8
CiPaw.03G217800 Carya illinoinensis HOM05D006034 ORTHO05D007535 5.9e-66 255.0 229 62.0
COL.COLO4_18220 Corchorus olitorius HOM05D006034 ORTHO05D001756 5.9e-66 255.0 148 77.7
MD15G1204600 Malus domestica HOM05D006034 ORTHO05D007535 7.7e-66 254.6 192 67.2
TWI32G0461 Tripterygium wilfordii HOM05D006034 ORTHO05D007535 1.3e-65 253.8 148 79.1
MELO3C015455.2 Cucumis melo HOM05D006034 ORTHO05D007535 3.8e-65 252.3 148 75.0
SGA_v2.0_scaffold62G21594 Striga asiatica HOM05D006034 ORTHO05D007535 6.5e-65 251.5 148 75.7
ECA234G0840 Erigeron canadensis HOM05D006034 ORTHO05D001756 8.5e-65 251.1 148 77.0
Lsat_1_v5_gn_5_145641 Lactuca sativa HOM05D006034 ORTHO05D007535 8.5e-65 251.1 203 64.5
Mapoly0014s0071 Marchantia polymorpha HOM05D006034 ORTHO05D007535 1.1e-64 250.8 197 59.4
CsaV3_1G040270 Cucumis sativus L. HOM05D006034 ORTHO05D007535 1.9e-64 250.0 148 75.0
MD02G1076200 Malus domestica HOM05D006034 ORTHO05D007535 7.2e-64 248.1 192 69.3
PGSC0003DMG400000341 Solanum tuberosum HOM05D006034 ORTHO05D007535 3.6e-63 245.7 148 73.0
QL02p062983 Quercus lobata HOM05D006034 ORTHO05D007535 8.0e-63 244.6 178 64.6
HPP92_023401 Vanilla planifolia HOM05D006034 ORTHO05D007535 5.2e-62 241.9 148 72.3
Prupe.7G212400 Prunus persica HOM05D006034 ORTHO05D007535 9.7e-61 237.7 148 73.6
FvH4_1g22100 Fragaria vesca HOM05D006034 ORTHO05D007535 1.3e-60 237.3 196 59.2
FAN19G2130 Fragaria x ananassa HOM05D006034 ORTHO05D007535 1.3e-60 237.3 196 59.2
Sed0024135 Sechium edule HOM05D006034 ORTHO05D007535 2.2e-60 236.5 156 69.2
ATR0705G153 Amborella trichopoda HOM05D006034 ORTHO05D007535 4.8e-60 235.3 194 58.2
SEGI_04673 Sequoiadendron giganteum HOM05D006034 ORTHO05D007535 6.3e-60 235.0 148 70.3
Sopen12g003720 Solanum pennellii HOM05D006034 ORTHO05D007535 6.3e-60 235.0 148 69.6
THA.LOC104807985 Tarenaya hassleriana HOM05D006034 ORTHO05D007535 8.2e-60 234.6 176 65.9
RcHm_v2.0_Chr2g0093061 Rosa chinensis HOM05D006034 ORTHO05D007535 1.1e-59 234.2 148 70.3
CAN.G1241.18 Capsicum annuum HOM05D006034 ORTHO05D007535 1.6e-58 230.3 148 69.6
FAN26G1667 Fragaria x ananassa HOM05D006034 ORTHO05D007535 3.5e-58 229.2 196 62.2
Actinidia25263 Actinidia chinensis HOM05D006034 ORTHO05D007535 1.3e-57 227.3 148 70.3
Eucgr.C00910 Eucalyptus grandis HOM05D006034 ORTHO05D007535 1.3e-57 227.3 208 55.3
Sed0009633 Sechium edule HOM05D006034 ORTHO05D007535 6.5e-57 224.9 137 74.5
Solyc12g008790.3 Solanum lycopersicum HOM05D006034 ORTHO05D007535 8.5e-57 224.6 148 67.6
Manes.03G032201 Manihot esculenta HOM05D006034 ORTHO05D007535 1.5e-56 223.8 148 68.2
PSO210G3620 Papaver somniferum HOM05D006034 ORTHO05D007535 1.5e-56 223.8 148 68.2
Os01g0722100 Oryza sativa ssp. japonica HOM05D006034 ORTHO05D007535 2.5e-56 223.0 148 67.6
Lj7C673T11 Lonicera japonica HOM05D006034 ORTHO05D007535 5.5e-56 221.9 148 70.3
EL10Ac8g19307 Beta vulgaris HOM05D006034 ORTHO05D007535 4.7e-55 218.8 148 66.9
PSO210G1139 Papaver somniferum HOM05D006034 ORTHO05D007535 6.1e-55 218.4 234 52.1
Pp3c5_18660 Physcomitrium patens HOM05D006034 ORTHO05D007535 1.0e-54 217.6 199 58.8
SMO118G0489 Selaginella moellendorffii HOM05D006034 ORTHO05D007535 1.0e-54 217.6 143 69.2
FAN28G0362 Fragaria x ananassa HOM05D006034 ORTHO05D007535 1.2e-53 214.2 136 71.3
Sabra06G0118900 Salix brachista HOM05D006034 ORTHO05D007535 2.0e-53 213.4 240 48.8
AUR62031326 Chenopodium quinoa HOM05D006034 ORTHO05D007535 2.8e-52 209.5 135 67.4
Carub.0007s1101 Capsella rubella HOM05D006034 ORTHO05D007535 6.3e-52 208.4 226 50.4
CBR_g36936 Chara braunii HOM05D006034 ORTHO05D007535 8.2e-52 208.0 148 64.9
FAN23G1099 Fragaria x ananassa HOM05D006034 ORTHO05D007535 7.0e-51 204.9 136 67.6
Zm00001eb361670 Zea mays HOM05D006034 ORTHO05D007535 2.7e-50 203.0 148 63.5
ClCG03G015740 Citrullus lanatus HOM05D000085 ORTHO05D001756 1.3e-49 200.7 200 56.5
Duzib150G0162 Durio zibethinus HOM05D006034 ORTHO05D007535 6.5e-49 198.4 228 57.5
Hma1.2p1_0800F.1_g219980 Hydrangea macrophylla HOM05D006034 ORTHO05D007535 8.5e-49 198.0 119 77.3
TWI34G0201 Tripterygium wilfordii HOM05D006034 ORTHO05D007535 1.9e-48 196.8 118 75.4
SalBow6G0258 Salvia bowleyana HOM05D006034 ORTHO05D007535 4.2e-48 195.7 166 66.3
PGR142G3838 Punica granatum HOM05D006034 ORTHO05D007535 2.1e-47 193.4 230 51.7
Oeu021834.2 Olea europaea HOM05D006034 ORTHO05D007535 8.0e-47 191.4 148 60.8
BolC3t21232H Brassica oleracea HOM05D006034 ORTHO05D007535 4.0e-46 189.1 148 62.2
BcaC01g01176 Brassica carinata HOM05D006034 ORTHO05D007535 5.2e-46 188.7 148 61.5
C03p89230 Brassica napus HOM05D006034 ORTHO05D007535 1.2e-45 187.6 148 61.5
Sp7g27400 Schrenkiella parvula HOM05D006034 ORTHO05D007535 1.5e-45 187.2 148 62.2
BcaB03g12611 Brassica carinata HOM05D006034 ORTHO05D007535 5.7e-45 185.3 148 60.8
A08p19610 Brassica napus HOM05D006034 ORTHO05D007535 7.5e-45 184.9 148 60.8
BraA08t33919Z Brassica rapa HOM05D006034 ORTHO05D007535 7.5e-45 184.9 148 60.8
Atru.chr7.1566 Acer truncatum HOM05D006034 ORTHO05D007535 9.8e-45 184.5 148 60.8
CARHR237370 Cardamine hirsuta HOM05D006034 ORTHO05D007535 1.7e-44 183.7 148 60.8
THA.LOC104827538 Tarenaya hassleriana HOM05D006034 ORTHO05D007535 6.3e-44 181.8 149 59.7
MSTRG.19527 Avicennia marina HOM05D006034 ORTHO05D007535 1.4e-43 180.6 103 76.7
Glyma.01G003200 Glycine max HOM05D006034 ORTHO05D007535 3.1e-43 179.5 103 78.6
Peaxi162Scf00498g00128 Petunia axillaris HOM05D006034 ORTHO05D007535 7.0e-43 178.3 147 58.5
Nitab4.5_0000540g0250 Nicotiana tabacum HOM05D006034 ORTHO05D007535 1.2e-42 177.6 205 51.7
AL7G22860 Arabidopsis lyrata HOM05D006034 ORTHO05D007535 2.0e-42 176.8 148 58.1
vmacro17221 Vaccinium macrocarpon HOM05D006034 ORTHO05D007535 2.7e-42 176.4 206 50.0
CDE05G1399 Ceratophyllum demersum HOM05D006034 ORTHO05D007535 3.8e-41 172.6 105 70.5
Haze_25892 Corylus avellana HOM05D006034 ORTHO05D007535 3.3e-40 169.5 119 68.9
Aa31LG2G20940 Aethionema arabicum HOM05D006034 ORTHO05D007535 2.1e-39 166.8 143 58.7
Hund24744 Selenicereus undatus HOM05D006034 ORTHO05D007535 1.4e-38 164.1 189 47.6
Sc18g0001930 Simmondsia chinensis HOM05D006034 ORTHO05D007535 1.2e-37 161.0 185 53.5
BcaC09g52218 Brassica carinata HOM05D006034 ORTHO05D007535 1.5e-37 160.6 155 55.5
Nitab4.5_0011903g0020 Nicotiana tabacum HOM05D006034 ORTHO05D007535 3.7e-36 156.0 210 52.4
Thecc.09G091900 Theobroma cacao HOM05D006034 ORTHO05D007535 4.1e-35 152.5 103 68.0
AagrBONN_evm.TU.Sc2ySwM_228.1841 Anthoceros agrestis HOM05D006034 ORTHO05D007535 7.0e-35 151.8 176 46.6
C01p09780 Brassica napus HOM05D006034 ORTHO05D007535 9.2e-35 151.4 194 44.3
Thhalv10025613m.g Eutrema salsugineum HOM05D006034 ORTHO05D007535 1.0e-33 147.9 111 63.1
AUR62027411 Chenopodium quinoa HOM05D006034 ORTHO05D007535 1.3e-33 147.5 97 62.9
THA.LOC104814611 Tarenaya hassleriana HOM05D006034 ORTHO05D007535 6.1e-31 138.7 180 45.0
BcaC09g51741 Brassica carinata HOM05D000577 ORTHO05D007535 1.8e-30 137.1 138 52.2
CSS0015474 Camellia sinensis var. sinensis HOM05D006034 ORTHO05D007535 1.5e-29 134.0 134 48.5
PRCOL_00006271 Prasinoderma coloniale HOM05D006034 ORTHO05D007535 1.5e-29 134.0 182 47.8
C01p09900 Brassica napus HOM05D006034 ORTHO05D007535 1.7e-28 130.6 121 57.9
AT4G29540 Arabidopsis thaliana HOM05D006034 ORTHO05D007535 1.1e-27 127.9 82 72.0
Rhsim05G0022600 Rhododendron simsii HOM05D000085 ORTHO05D001756 4.0e-22 109.4 139 43.9
Nn8g38904 Nelumbo nucifera HOM05D006034 ORTHO05D007535 4.4e-21 105.9 148 39.2
MD13G1273400 Malus domestica HOM05D006034 ORTHO05D007535 2.2e-20 103.6 60 78.3
Ca_29456_v3 Cicer arietinum L. HOM05D003386 ORTHO05D007535 1.0e-17 94.7 182 35.7
MBI01_g02257_MAGBIO Magnolia biondii HOM05D006034 ORTHO05D007535 8.6e-17 91.7 140 38.6
BolC1t00940H Brassica oleracea HOM05D006034 ORTHO05D007535 4.7e-15 85.9 101 45.5
DCAR_011988 Daucus carota HOM05D006034 ORTHO05D007535 1.1e-14 84.7 49 73.5
C01p09940 Brassica napus HOM05D000577 ORTHO05D007535 3.1e-14 83.2 52 75.0
BolC1t00956H Brassica oleracea HOM05D000577 ORTHO05D001093 3.1e-14 83.2 52 75.0
unitig_27.g24727 Utricularia gibba HOM05D006034 ORTHO05D007535 8.9e-14 81.6 67 53.7
MD17G1181800 Malus domestica HOM05D006034 ORTHO05D007535 7.8e-10 68.6 40 77.5
arahy.Tifrunner.gnm1.ann1.4X02I9 Arachis hypogaea HOM05D006034 ORTHO05D007535 8.1e-07 58.5 28 89.3
arahy.Tifrunner.gnm1.ann1.ZF8ARW Arachis hypogaea HOM05D006034 ORTHO05D007535 1.1e-06 58.2 28 89.3
arahy.Tifrunner.gnm1.ann1.N9NTP8 Arachis hypogaea HOM05D000344 ORTHO05D005296 3.1e-06 56.6 28 85.7
arahy.Tifrunner.gnm1.ann1.9T8A1S Arachis hypogaea HOM05D006034 ORTHO05D007535 4.0e-06 56.2 28 82.1


User provided reference genes

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