Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_25581_v3 Cicer arietinum L. HOM05D004751 ORTHO05D005819 1.0e-252 876.3 458 100.0
Medtr6g088835 Medicago truncatula HOM05D004751 ORTHO05D005819 3.4e-168 595.5 590 57.1
Ca_25582_v3 Cicer arietinum L. HOM05D004751 ORTHO05D005819 7.7e-168 594.3 596 56.5
TPR.G31000 Trifolium pratense HOM05D004751 ORTHO05D005819 2.5e-166 589.3 589 56.7
Psat1g048040 Pisum sativum HOM05D004751 ORTHO05D005819 2.0e-163 579.7 596 55.2
Phvul.004G175100 Phaseolus vulgaris HOM05D004751 ORTHO05D005819 5.3e-161 571.6 599 53.4
Glyma.07G125200 Glycine max HOM05D004751 ORTHO05D005819 3.5e-160 568.9 596 54.4
Glyma.01G006600 Glycine max HOM05D004751 ORTHO05D005819 1.0e-159 567.4 599 54.1
VMungo0464G0426 Vigna mungo HOM05D004751 ORTHO05D005819 5.0e-159 565.1 596 53.9
arahy.Tifrunner.gnm1.ann1.11NKIJ Arachis hypogaea HOM05D004751 ORTHO05D005819 3.2e-158 562.4 589 53.7
arahy.Tifrunner.gnm1.ann1.U02M06 Arachis hypogaea HOM05D004751 ORTHO05D005819 3.2e-158 562.4 589 53.7
Lj2g0020264 Lotus japonicus HOM05D004751 ORTHO05D005819 4.2e-158 562.0 596 54.2
Lalb_Chr14g0371941 Lupinus albus HOM05D004751 ORTHO05D005819 1.4e-156 557.0 596 53.0
COL.COLO4_34728 Corchorus olitorius HOM05D004751 ORTHO05D005819 4.4e-155 552.0 520 56.5
GSVIVG01015287001 Vitis vinifera HOM05D004751 ORTHO05D005819 6.3e-154 548.1 547 54.7
QL02p040907 Quercus lobata HOM05D004751 ORTHO05D005819 8.8e-148 527.7 594 49.7
Cpa.g.sc78.25 Carica papaya HOM05D004751 ORTHO05D005819 1.2e-147 527.3 594 49.7
Gorai.009G028000 Gossypium raimondii HOM05D004751 ORTHO05D005819 1.2e-147 527.3 583 51.1
Gohir.D05G027800 Gossypium hirsutum HOM05D004751 ORTHO05D005819 1.5e-147 526.9 582 51.0
Thecc.09G099100 Theobroma cacao HOM05D004751 ORTHO05D005819 1.3e-146 523.9 595 49.7
Gohir.A05G026300 Gossypium hirsutum HOM05D004751 ORTHO05D005819 1.7e-146 523.5 583 50.8
RcHm_v2.0_Chr1g0331571 Rosa chinensis HOM05D004751 ORTHO05D005819 6.3e-146 521.5 595 50.6
Ciclev10007242m.g Citrus clementina HOM05D004751 ORTHO05D005819 1.1e-145 520.8 593 50.4
Dinv42256 Davidia involucrata HOM05D004751 ORTHO05D005819 1.4e-145 520.4 594 50.5
Prupe.2G065200 Prunus persica HOM05D004751 ORTHO05D005819 1.8e-145 520.0 595 50.4
arahy.Tifrunner.gnm1.ann1.YRLX64 Arachis hypogaea HOM05D004751 ORTHO05D005819 3.1e-145 519.2 589 50.3
Haze_25834 Corylus avellana HOM05D004751 ORTHO05D005819 4.1e-145 518.8 595 49.4
MD02G1262100 Malus domestica HOM05D004751 ORTHO05D005819 1.2e-144 517.3 594 50.2
Duzib150G1241 Durio zibethinus HOM05D004751 ORTHO05D005819 3.5e-144 515.8 595 49.2
Eucgr.C03719 Eucalyptus grandis HOM05D004751 ORTHO05D005819 4.5e-144 515.4 595 49.1
FvH4_7g05110 Fragaria vesca HOM05D004751 ORTHO05D005819 7.7e-144 514.6 595 50.3
FAN06G4551 Fragaria x ananassa HOM05D004751 ORTHO05D005819 1.3e-143 513.8 595 50.3
arahy.Tifrunner.gnm1.ann1.9BR2YY Arachis hypogaea HOM05D004751 ORTHO05D005819 5.0e-143 511.9 589 49.9
FAN01G0060 Fragaria x ananassa HOM05D004751 ORTHO05D005819 8.6e-143 511.1 595 49.9
Manes.16G108000 Manihot esculenta HOM05D004751 ORTHO05D005819 8.6e-143 511.1 595 49.1
ClCG03G016070 Citrullus lanatus HOM05D004751 ORTHO05D005819 1.5e-142 510.4 593 49.1
Atru.chr7.1477 Acer truncatum HOM05D004751 ORTHO05D005819 2.5e-142 509.6 595 49.4
Cfa003165 Carpinus fangiana HOM05D004751 ORTHO05D005819 2.5e-142 509.6 595 48.6
Sabra06G0121300 Salix brachista HOM05D004751 ORTHO05D005819 7.2e-142 508.1 594 48.7
Actinidia17515 Actinidia chinensis HOM05D004751 ORTHO05D005819 2.8e-141 506.1 594 49.5
DCAR_028653 Daucus carota HOM05D004751 ORTHO05D005819 2.8e-141 506.1 593 48.4
TWI32G0016 Tripterygium wilfordii HOM05D004751 ORTHO05D005819 2.8e-141 506.1 593 49.6
TWI34G0109 Tripterygium wilfordii HOM05D004751 ORTHO05D005819 8.0e-141 504.6 593 49.1
CsaV3_1G039890 Cucumis sativus L. HOM05D004751 ORTHO05D005819 1.4e-140 503.8 593 48.4
MD07G1058300 Malus domestica HOM05D004751 ORTHO05D005819 1.4e-140 503.8 595 49.6
PGR102G2506 Punica granatum HOM05D004751 ORTHO05D005819 1.8e-140 503.4 596 48.5
Rhsim05G0038900 Rhododendron simsii HOM05D004751 ORTHO05D005819 8.8e-140 501.1 594 48.5
Potri.006G153100 Populus trichocarpa HOM05D004751 ORTHO05D005819 2.0e-139 500.0 594 48.1
Hma1.2p1_0012F.1_g007400 Hydrangea macrophylla HOM05D004751 ORTHO05D005819 3.4e-139 499.2 590 48.5
MELO3C015420.2 Cucumis melo HOM05D004751 ORTHO05D005819 5.7e-139 498.4 589 48.4
ECA240G2374 Erigeron canadensis HOM05D004751 ORTHO05D005819 1.3e-138 497.3 565 49.7
TAR383G0360 Trochodendron aralioides HOM05D004751 ORTHO05D005819 2.8e-138 496.1 596 48.7
CSS0026223 Camellia sinensis var. sinensis HOM05D004751 ORTHO05D005819 6.3e-138 495.0 595 48.7
Lj7C667T4 Lonicera japonica HOM05D004751 ORTHO05D005819 1.1e-137 494.2 565 49.4
CSS0000434 Camellia sinensis var. sinensis HOM05D004751 ORTHO05D005819 1.4e-137 493.8 595 48.6
Lsat_1_v5_gn_7_39580 Lactuca sativa HOM05D004751 ORTHO05D005819 1.4e-137 493.8 577 49.7
Cc06_g10590 Coffea canephora HOM05D004751 ORTHO05D005819 3.1e-137 492.7 596 49.0
TAR626G1784 Trochodendron aralioides HOM05D004751 ORTHO05D005819 3.1e-137 492.7 596 48.7
TAR639G0003 Trochodendron aralioides HOM05D004751 ORTHO05D005819 3.1e-137 492.7 596 48.7
vmacro10847 Vaccinium macrocarpon HOM05D004751 ORTHO05D005819 9.2e-137 491.1 601 47.9
Sed0000923 Sechium edule HOM05D004751 ORTHO05D005819 2.0e-136 490.0 598 48.5
PSO210G2464 Papaver somniferum HOM05D004751 ORTHO05D005819 5.0e-135 485.3 593 47.0
EL10Ac8g18369 Beta vulgaris HOM05D004751 ORTHO05D005819 1.5e-134 483.8 597 47.1
CANSAT56G3494 Cannabis sativa HOM05D004751 ORTHO05D005819 1.9e-134 483.4 596 47.8
MBI15_g07764_MAGBIO Magnolia biondii HOM05D004751 ORTHO05D005819 1.9e-134 483.4 593 47.9
PSO210G3406 Papaver somniferum HOM05D004751 ORTHO05D005819 2.5e-134 483.0 594 46.8
SalBow1G2004 Salvia bowleyana HOM05D004751 ORTHO05D005819 4.3e-134 482.3 594 47.3
SGA_v2.0_scaffold19G08722 Striga asiatica HOM05D004751 ORTHO05D005819 7.3e-134 481.5 596 47.8
HanXRQChr03g0061061 Helianthus annuus HOM05D004751 ORTHO05D005819 2.1e-133 479.9 554 51.1
Migut.K00548 Erythranthe guttata HOM05D004751 ORTHO05D005819 2.8e-133 479.6 597 47.1
Sp7g27250 Schrenkiella parvula HOM05D004751 ORTHO05D005819 4.7e-133 478.8 591 46.9
AT4G29380 Arabidopsis thaliana HOM05D004751 ORTHO05D005819 1.0e-132 477.6 591 46.2
CAN.G787.12 Capsicum annuum HOM05D004751 ORTHO05D005819 5.2e-132 475.3 595 47.2
Solyc04g012170.4 Solanum lycopersicum HOM05D004751 ORTHO05D005819 1.5e-131 473.8 595 47.1
Sopen04g006260 Solanum pennellii HOM05D004751 ORTHO05D005819 1.5e-131 473.8 595 47.1
Carub.0007s1117 Capsella rubella HOM05D004751 ORTHO05D005819 2.6e-131 473.0 591 45.7
AL7G23020 Arabidopsis lyrata HOM05D004751 ORTHO05D005819 4.4e-131 472.2 591 45.7
Ah.09g230480 Amaranthus hybridus HOM05D004751 ORTHO05D005819 5.7e-131 471.9 593 45.7
PGSC0003DMG400023589 Solanum tuberosum HOM05D004751 ORTHO05D005819 4.9e-130 468.8 595 46.7
C01p10120 Brassica napus HOM05D004751 ORTHO05D005819 1.1e-129 467.6 593 45.7
AUR62021393 Chenopodium quinoa HOM05D004751 ORTHO05D005819 1.8e-129 466.8 596 45.6
BolC1t00970H Brassica oleracea HOM05D004751 ORTHO05D005819 2.4e-129 466.5 593 45.5
Aa31LG2G21070 Aethionema arabicum HOM05D004751 ORTHO05D005819 3.2e-129 466.1 601 44.6
Aqoxy7G03607 Aquilegia oxysepala HOM05D004751 ORTHO05D005819 4.1e-129 465.7 593 46.5
Thhalv10024212m.g Eutrema salsugineum HOM05D004751 ORTHO05D005819 5.4e-129 465.3 591 45.9
AUR62010880 Chenopodium quinoa HOM05D004751 ORTHO05D005819 7.0e-129 464.9 596 46.3
Oeu018580.2 Olea europaea HOM05D004751 ORTHO05D005819 7.0e-129 464.9 548 49.1
THA.LOC104814595 Tarenaya hassleriana HOM05D004751 ORTHO05D005819 7.8e-128 461.5 595 46.1
A01p08650 Brassica napus HOM05D004751 ORTHO05D005819 1.0e-127 461.1 593 45.2
BraA01t00815Z Brassica rapa HOM05D004751 ORTHO05D005819 2.3e-127 459.9 593 45.0
BcaC09g51723 Brassica carinata HOM05D004751 ORTHO05D005819 8.6e-127 458.0 589 45.2
MSTRG.26388 Avicennia marina HOM05D004751 ORTHO05D005819 1.1e-126 457.6 596 45.8
ATR0730G043 Amborella trichopoda HOM05D004751 ORTHO05D005819 7.5e-123 444.9 587 45.5
Peaxi162Scf01157g00011 Petunia axillaris HOM05D004751 ORTHO05D005819 4.9e-122 442.2 595 45.4
Dinv36677 Davidia involucrata HOM05D004751 ORTHO05D005819 3.5e-120 436.0 403 59.1
unitig_8.g4485 Utricularia gibba HOM05D004751 ORTHO05D005819 5.2e-116 422.2 443 52.1
Oeu021455.1 Olea europaea HOM05D004751 ORTHO05D005819 4.3e-110 402.5 493 47.3
Hund26286 Selenicereus undatus HOM05D004751 ORTHO05D005819 4.6e-104 382.5 536 42.4
CDE04G1922 Ceratophyllum demersum HOM05D004751 ORTHO05D005819 6.6e-103 378.6 545 41.3
Nitab4.5_0001242g0100 Nicotiana tabacum HOM05D004751 ORTHO05D005819 1.9e-102 377.1 379 55.1
Os02g0796700 Oryza sativa ssp. japonica HOM05D004751 ORTHO05D005819 2.5e-102 376.7 443 47.4
Zm00001eb257890 Zea mays HOM05D004751 ORTHO05D005819 1.2e-99 367.9 564 41.5
Nitab4.5_0015727g0010 Nicotiana tabacum HOM05D004751 ORTHO05D005819 8.7e-95 351.7 249 69.9
Sc08g0008060 Simmondsia chinensis HOM05D004751 ORTHO05D005819 2.6e-91 340.1 466 43.1
CiPaw.03G223300 Carya illinoinensis HOM05D004751 ORTHO05D005819 6.2e-85 318.9 215 72.6
Pp3c15_10000 Physcomitrium patens HOM05D004751 ORTHO05D005819 8.4e-82 308.5 445 42.9
Pp3c9_3860 Physcomitrium patens HOM05D004751 ORTHO05D005819 6.0e-80 302.4 444 41.9
Hund09091 Selenicereus undatus HOM05D004751 ORTHO05D005819 9.6e-78 295.0 489 38.7
AagrBONN_evm.TU.Sc2ySwM_228.4976 Anthoceros agrestis HOM05D004751 ORTHO05D005819 2.2e-74 283.9 442 40.0
Mapoly0002s0158 Marchantia polymorpha HOM05D004751 ORTHO05D005819 2.8e-69 266.9 459 36.4
SEGI_30648 Sequoiadendron giganteum HOM05D004751 ORTHO05D005819 2.1e-64 250.8 353 42.5
SMO347G0104 Selaginella moellendorffii HOM05D004751 ORTHO05D005819 2.3e-63 247.3 430 37.4
CARHR237190 Cardamine hirsuta HOM05D004751 ORTHO05D005819 8.8e-63 245.4 418 37.6
SHI02649 Sapria himalayana HOM05D004751 ORTHO05D005819 6.5e-58 229.2 402 36.8
Zm00001eb192340 Zea mays HOM05D004751 ORTHO05D005819 5.7e-54 216.1 372 38.2
RcHm_v2.0_Chr1g0332481 Rosa chinensis HOM05D004751 ORTHO05D005819 3.2e-49 200.3 150 68.7
Lsat_1_v5_gn_0_39700 Lactuca sativa HOM05D004751 ORTHO05D005819 6.1e-48 196.1 159 62.9
CBR_g47981 Chara braunii HOM05D004751 ORTHO05D005819 5.7e-38 162.9 627 24.7
Cre06.g290500 Chlamydomonas reinhardtii HOM05D004751 ORTHO05D005819 1.9e-25 121.3 509 25.5
PSO832G2682 Papaver somniferum HOM05D004751 ORTHO05D005819 1.5e-17 95.1 317 29.0
RcHm_v2.0_Chr1g0332471 Rosa chinensis HOM05D004751 ORTHO05D050748 3.6e-16 90.5 56 80.4
SHI02652 Sapria himalayana HOM05D004751 ORTHO05D005819 6.8e-15 86.3 97 48.5
PRCOL_00004168 Prasinoderma coloniale HOM05D004751 ORTHO05D005819 2.6e-14 84.3 102 41.2
SHI02653 Sapria himalayana HOM05D004751 ORTHO05D050748 2.6e-14 84.3 64 64.1


User provided reference genes

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