Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_25501_v3 Cicer arietinum L. HOM05D005829 ORTHO05D007246 2.1e-97 359.0 180 100.0
Ca_00264_v3 Cicer arietinum L. HOM05D005829 ORTHO05D007246 3.2e-93 345.1 173 98.8
Medtr6g084620 Medicago truncatula HOM05D005829 ORTHO05D007246 8.2e-65 250.8 180 75.0
TPR.G35237 Trifolium pratense HOM05D005829 ORTHO05D007246 7.9e-52 207.6 117 81.2
Lj2g0004175 Lotus japonicus HOM05D005829 ORTHO05D007246 4.7e-44 181.8 193 59.6
arahy.Tifrunner.gnm1.ann1.K96EGP Arachis hypogaea HOM05D005829 ORTHO05D007246 1.5e-37 160.2 190 53.7
Lalb_Chr14g0371231 Lupinus albus HOM05D005829 ORTHO05D007246 4.8e-33 145.2 190 50.0
TWI15G0782 Tripterygium wilfordii HOM05D005829 ORTHO05D007246 8.3e-33 144.4 189 49.7
arahy.Tifrunner.gnm1.ann1.SID7TX Arachis hypogaea HOM05D005829 ORTHO05D007246 1.8e-32 143.3 221 48.0
FAN08G3097 Fragaria x ananassa HOM05D005829 ORTHO05D007246 2.7e-31 139.4 195 48.2
FAN13G0492 Fragaria x ananassa HOM05D005829 ORTHO05D007246 3.5e-31 139.0 195 48.2
FAN18G3094 Fragaria x ananassa HOM05D005829 ORTHO05D007246 5.9e-31 138.3 195 47.7
Cfa019789 Carpinus fangiana HOM05D005829 ORTHO05D007246 1.0e-30 137.5 204 44.6
Haze_18659 Corylus avellana HOM05D005829 ORTHO05D007246 1.3e-30 137.1 203 43.8
FAN04G2288 Fragaria x ananassa HOM05D005829 ORTHO05D007246 1.3e-30 137.1 195 47.7
Prupe.5G220500 Prunus persica HOM05D005829 ORTHO05D007246 1.5e-29 133.7 196 47.4
Duzib068G0473 Durio zibethinus HOM05D005829 ORTHO05D007246 4.2e-29 132.1 201 46.3
FvH4_5g12290 Fragaria vesca HOM05D005829 ORTHO05D007246 7.2e-29 131.3 195 46.2
FAN18G2130 Fragaria x ananassa HOM05D005829 ORTHO05D007246 7.2e-29 131.3 195 46.2
QL10p025073 Quercus lobata HOM05D005829 ORTHO05D007246 7.2e-29 131.3 193 44.0
Ciclev10022208m.g Citrus clementina HOM05D005829 ORTHO05D007246 9.5e-29 131.0 218 45.0
Manes.05G145805 Manihot esculenta HOM05D005829 ORTHO05D007246 9.5e-29 131.0 208 41.8
MD14G1226000 Malus domestica HOM05D005829 ORTHO05D007246 1.6e-28 130.2 203 45.8
TAR629G3023 Trochodendron aralioides HOM05D005829 ORTHO05D007246 1.6e-28 130.2 188 45.7
Duzib084G1006 Durio zibethinus HOM05D005829 ORTHO05D007246 2.8e-28 129.4 168 50.0
BcaC03g15467 Brassica carinata HOM05D005829 ORTHO05D007246 4.7e-28 128.6 206 43.7
C02p31470 Brassica napus HOM05D005829 ORTHO05D007246 4.7e-28 128.6 206 43.7
BolC2t09178H Brassica oleracea HOM05D005829 ORTHO05D007246 4.7e-28 128.6 206 43.7
GSVIVG01008273001 Vitis vinifera HOM05D005829 ORTHO05D007246 8.0e-28 127.9 209 43.5
CiPaw.15G129500 Carya illinoinensis HOM05D005829 ORTHO05D007246 1.0e-27 127.5 201 44.3
Dinv36156 Davidia involucrata HOM05D005829 ORTHO05D007246 1.8e-27 126.7 209 42.1
Potri.015G053800 Populus trichocarpa HOM05D005829 ORTHO05D007246 1.8e-27 126.7 207 43.0
RcHm_v2.0_Chr7g0185261 Rosa chinensis HOM05D005829 ORTHO05D007246 1.8e-27 126.7 198 44.4
CAN.G423.7 Capsicum annuum HOM05D005829 ORTHO05D007246 2.3e-27 126.3 172 43.0
Gohir.D09G173000 Gossypium hirsutum HOM05D005829 ORTHO05D007246 2.3e-27 126.3 200 44.5
MD06G1215200 Malus domestica HOM05D005829 ORTHO05D007246 2.3e-27 126.3 191 46.1
BraA02t06935Z Brassica rapa HOM05D005829 ORTHO05D007246 4.0e-27 125.6 206 43.2
CANSAT21G0600 Cannabis sativa HOM05D005829 ORTHO05D007246 4.0e-27 125.6 199 44.2
Sabra15G0075500 Salix brachista HOM05D005829 ORTHO05D007246 4.0e-27 125.6 209 42.6
Manes.01G012500 Manihot esculenta HOM05D005829 ORTHO05D007246 5.2e-27 125.2 216 41.7
Gohir.A09G177500 Gossypium hirsutum HOM05D005829 ORTHO05D007246 6.8e-27 124.8 207 43.5
Gorai.006G194900 Gossypium raimondii HOM05D005829 ORTHO05D007246 6.8e-27 124.8 200 44.0
Thecc.03G033800 Theobroma cacao HOM05D005829 ORTHO05D007246 6.8e-27 124.8 170 47.1
Cc04_g07210 Coffea canephora HOM05D005829 ORTHO05D007246 1.2e-26 124.0 188 45.2
Eucgr.K02215 Eucalyptus grandis HOM05D005829 ORTHO05D007246 1.2e-26 124.0 184 47.8
CsaV3_1G003750 Cucumis sativus L. HOM05D005829 ORTHO05D007246 1.5e-26 123.6 200 45.0
Cpa.g.sc13.3 Carica papaya HOM05D005829 ORTHO05D007246 2.0e-26 123.2 204 43.1
Hund02393 Selenicereus undatus HOM05D005829 ORTHO05D007246 3.4e-26 122.5 189 42.9
MELO3C017300.2 Cucumis melo HOM05D005829 ORTHO05D007246 4.4e-26 122.1 206 42.2
Aqoxy3G00323 Aquilegia oxysepala HOM05D005829 ORTHO05D007246 5.7e-26 121.7 164 45.1
A02p18930 Brassica napus HOM05D005829 ORTHO05D007246 7.5e-26 121.3 209 41.6
PGR083G1885 Punica granatum HOM05D005829 ORTHO05D007246 7.5e-26 121.3 211 42.7
ClCG06G014890 Citrullus lanatus HOM05D005829 ORTHO05D007246 9.8e-26 120.9 203 42.4
HanXRQChr10g0314971 Helianthus annuus HOM05D005829 ORTHO05D007246 9.8e-26 120.9 177 48.0
Potri.015G054100 Populus trichocarpa HOM05D005829 ORTHO05D007246 1.3e-25 120.6 86 64.0
CSS0021100 Camellia sinensis var. sinensis HOM05D005829 ORTHO05D007246 4.9e-25 118.6 219 41.6
Lsat_1_v5_gn_8_146520 Lactuca sativa HOM05D005829 ORTHO05D007246 4.9e-25 118.6 151 46.4
Thhalv10019131m.g Eutrema salsugineum HOM05D005829 ORTHO05D007246 8.3e-25 117.9 87 65.5
BcaC08g45615 Brassica carinata HOM05D005829 ORTHO05D007246 1.4e-24 117.1 208 41.3
DCAR_023199 Daucus carota HOM05D005829 ORTHO05D007246 1.8e-24 116.7 176 42.6
Sp5g29090 Schrenkiella parvula HOM05D005829 ORTHO05D007246 1.8e-24 116.7 210 40.5
BcaB03g15734 Brassica carinata HOM05D005829 ORTHO05D007246 2.4e-24 116.3 212 40.1
PGSC0003DMG400004051 Solanum tuberosum HOM05D005829 ORTHO05D007246 2.4e-24 116.3 187 41.7
ATR0665G268 Amborella trichopoda HOM05D005829 ORTHO05D007246 3.1e-24 115.9 154 44.2
ECA234G2972 Erigeron canadensis HOM05D005829 ORTHO05D007246 3.1e-24 115.9 193 44.6
Oeu006380.1 Olea europaea HOM05D005829 ORTHO05D007246 3.1e-24 115.9 197 39.6
BcaB05g24816 Brassica carinata HOM05D005829 ORTHO05D007246 7.0e-24 114.8 209 40.2
BcaB05g24818 Brassica carinata HOM05D005829 ORTHO05D007246 7.0e-24 114.8 209 40.2
EL10Ac5g11432 Beta vulgaris HOM05D005829 ORTHO05D007246 2.7e-23 112.8 141 45.4
BolC6t38490H Brassica oleracea HOM05D005829 ORTHO05D007246 2.7e-23 112.8 108 54.6
Peaxi162Scf00013g00945 Petunia axillaris HOM05D005829 ORTHO05D007246 2.7e-23 112.8 188 39.9
Sopen06g026440 Solanum pennellii HOM05D005829 ORTHO05D007246 2.7e-23 112.8 195 40.5
Ah.11g045030 Amaranthus hybridus HOM05D005829 ORTHO05D007246 3.5e-23 112.5 164 43.3
Nitab4.5_0010801g0020 Nicotiana tabacum HOM05D005829 ORTHO05D007246 3.5e-23 112.5 179 40.8
AL2G33720 Arabidopsis lyrata HOM05D005829 ORTHO05D007246 4.5e-23 112.1 213 40.8
Os03g0710600 Oryza sativa ssp. japonica HOM05D005829 ORTHO05D007246 4.5e-23 112.1 97 53.6
Sed0000228 Sechium edule HOM05D005829 ORTHO05D007246 4.5e-23 112.1 169 42.6
CARHR067000 Cardamine hirsuta HOM05D005829 ORTHO05D007246 5.9e-23 111.7 222 38.3
Oeu046995.1 Olea europaea HOM05D005829 ORTHO05D007246 5.9e-23 111.7 171 40.4
A07p29590 Brassica napus HOM05D005829 ORTHO05D007246 7.8e-23 111.3 108 53.7
BraA07t30600Z Brassica rapa HOM05D005829 ORTHO05D007246 7.8e-23 111.3 108 53.7
Nitab4.5_0011561g0030 Nicotiana tabacum HOM05D005829 ORTHO05D007246 7.8e-23 111.3 202 39.1
Solyc06g069170.4 Solanum lycopersicum HOM05D005829 ORTHO05D007246 7.8e-23 111.3 195 40.5
MSTRG.11323 Avicennia marina HOM05D005829 ORTHO05D007246 1.0e-22 110.9 154 42.2
Atru.chr9.821 Acer truncatum HOM05D005829 ORTHO05D007246 1.3e-22 110.5 212 36.8
HPP92_013214 Vanilla planifolia HOM05D005829 ORTHO05D007246 1.3e-22 110.5 87 57.5
HPP92_013263 Vanilla planifolia HOM05D005829 ORTHO05D007246 1.3e-22 110.5 87 57.5
Migut.I00369 Erythranthe guttata HOM05D005829 ORTHO05D007246 2.3e-22 109.8 164 39.6
Sc12g0006790 Simmondsia chinensis HOM05D005829 ORTHO05D007246 2.9e-22 109.4 164 40.9
AT1G73885 Arabidopsis thaliana HOM05D005829 ORTHO05D007246 3.8e-22 109.0 85 60.0
BcaC03g15466 Brassica carinata HOM05D005829 ORTHO05D007246 5.0e-22 108.6 194 42.8
Carub.0002s2066 Capsella rubella HOM05D005829 ORTHO05D007246 8.6e-22 107.8 215 39.5
Aa31LG4G4200 Aethionema arabicum HOM05D005829 ORTHO05D007246 1.1e-21 107.5 213 35.7
SEGI_06072 Sequoiadendron giganteum HOM05D005829 ORTHO05D007246 1.1e-21 107.5 156 41.7
C06p33760 Brassica napus HOM05D005829 ORTHO05D007246 1.5e-21 107.1 208 39.4
THA.LOC104813901 Tarenaya hassleriana HOM05D005829 ORTHO05D007246 1.5e-21 107.1 209 37.8
Actinidia06971 Actinidia chinensis HOM05D005829 ORTHO05D007246 5.6e-21 105.1 195 38.5
BcaC09g48855 Brassica carinata HOM05D005829 ORTHO05D007246 5.6e-21 105.1 107 51.4
C01p45190 Brassica napus HOM05D005829 ORTHO05D007246 5.6e-21 105.1 107 51.4
BolC1t04492H Brassica oleracea HOM05D005829 ORTHO05D007246 5.6e-21 105.1 107 51.4
Zm00001eb054790 Zea mays HOM05D005829 ORTHO05D007246 5.6e-21 105.1 97 54.6
unitig_749.g13417 Utricularia gibba HOM05D005829 ORTHO05D007246 9.5e-21 104.4 127 46.5
Zm00001eb216440 Zea mays HOM05D005829 ORTHO05D007246 9.5e-21 104.4 97 52.6
PSO017G1947 Papaver somniferum HOM05D005829 ORTHO05D007246 2.1e-20 103.2 197 37.1
PSO478G3740 Papaver somniferum HOM05D005829 ORTHO05D007246 8.0e-20 101.3 197 36.5
CDE05G0659 Ceratophyllum demersum HOM05D005829 ORTHO05D007246 1.8e-19 100.1 159 39.6
CDE11G0392 Ceratophyllum demersum HOM05D005829 ORTHO05D007246 4.0e-19 99.0 146 39.7
Rhsim13G0208500 Rhododendron simsii HOM05D005829 ORTHO05D007246 5.2e-19 98.6 228 34.2
Nn1g06955 Nelumbo nucifera HOM05D005829 ORTHO05D007246 1.8e-16 90.1 185 33.5
vmacro04041 Vaccinium macrocarpon HOM05D005829 ORTHO05D007246 1.2e-15 87.4 215 31.6
SGA_v2.0_scaffold25G10988 Striga asiatica HOM05D005829 ORTHO05D007246 5.9e-15 85.1 220 34.1
AUR62025855 Chenopodium quinoa HOM05D005829 ORTHO05D007246 8.6e-14 81.3 58 63.8
AUR62029856 Chenopodium quinoa HOM05D005829 ORTHO05D007246 8.6e-14 81.3 58 63.8
Phvul.004G158500 Phaseolus vulgaris HOM05D005829 ORTHO05D007246 2.5e-13 79.7 205 35.6
Gohir.A08G094610 Gossypium hirsutum HOM05D005829 ORTHO05D007246 4.3e-13 79.0 64 53.1
AagrBONN_evm.TU.Sc2ySwM_228.1174 Anthoceros agrestis HOM05D005829 ORTHO05D007246 1.1e-11 74.3 135 40.0
AagrBONN_evm.TU.Sc2ySwM_228.2224 Anthoceros agrestis HOM05D005829 ORTHO05D007246 1.5e-10 70.5 144 36.8
THA.LOC104813291 Tarenaya hassleriana HOM05D005829 ORTHO05D007246 1.5e-10 70.5 65 53.8
FAN14G0369 Fragaria x ananassa HOM05D005829 ORTHO05D007246 2.0e-10 70.1 91 45.1
Pp3c4_12650 Physcomitrium patens HOM05D005829 ORTHO05D007246 1.7e-09 67.0 83 41.0
Pp3c4_12780 Physcomitrium patens HOM05D005829 ORTHO05D007246 1.7e-09 67.0 83 41.0
Mapoly0028s0124 Marchantia polymorpha HOM05D005829 ORTHO05D007246 2.2e-09 66.6 79 40.5
Glyma.07G090700 Glycine max HOM05D005829 ORTHO05D007246 3.7e-09 65.9 205 31.2
VMungo0464G0155 Vigna mungo HOM05D006108 ORTHO05D007605 1.9e-08 63.5 192 31.8


User provided reference genes

Program Settings